RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 CFAP70Q5T0N1 1121 aa11.15□□□□□ -0.62
CAPRIN1-208ENST00000530008 TSC1Q92574 1164 aa11.15□□□□□ -0.62
CAPRIN1-208ENST00000530008 RFX1P22670 979 aa11.14□□□□□ -0.63
CAPRIN1-208ENST00000530008 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.13□□□□□ -0.63
CAPRIN1-208ENST00000530008 GRIPAP1Q4V328 841 aa11.13□□□□□ -0.63
CAPRIN1-208ENST00000530008 PPP1R12CQ9BZL4 782 aa11.13□□□□□ -0.63
CAPRIN1-208ENST00000530008 RABGEF1Q9UJ41 708 aa11.13□□□□□ -0.63
CAPRIN1-208ENST00000530008 C6orf229H3BNL8 230 aa11.12□□□□□ -0.63
CAPRIN1-208ENST00000530008 HDGFP51858 240 aaKnown RBP11.12□□□□□ -0.63
CAPRIN1-208ENST00000530008 GZF1Q9H116 711 aaPredicted RBP11.12□□□□□ -0.63
CAPRIN1-208ENST00000530008 SEPT9Q9UHD8 586 aaPredicted RBP11.12□□□□□ -0.63
CAPRIN1-208ENST00000530008 SLC4A3P48751 1232 aa11.11□□□□□ -0.63
CAPRIN1-208ENST00000530008 PSEN2P49810 448 aa11.11□□□□□ -0.63
CAPRIN1-208ENST00000530008 SRPK2P78362 688 aaKnown RBP11.11□□□□□ -0.63
CAPRIN1-208ENST00000530008 FUT2Q10981 343 aa11.11□□□□□ -0.63
CAPRIN1-208ENST00000530008 ALG2Q9H553 416 aa11.11□□□□□ -0.63
CAPRIN1-208ENST00000530008 TMCO4Q5TGY1 634 aa11.1□□□□□ -0.63
CAPRIN1-208ENST00000530008 SLF2Q8IX21 1173 aa11.1□□□□□ -0.63
CAPRIN1-208ENST00000530008 EPS8L1Q8TE68 723 aa11.1□□□□□ -0.63
CAPRIN1-208ENST00000530008 USTQ9Y2C2 406 aa11.1□□□□□ -0.63
CAPRIN1-208ENST00000530008 CFHP08603 1231 aa11.08□□□□□ -0.64
CAPRIN1-208ENST00000530008 CSB-PGBD3P0DP91 1061 aa11.08□□□□□ -0.64
CAPRIN1-208ENST00000530008 SLC4A5Q9BY07 1137 aa11.08□□□□□ -0.64
CAPRIN1-208ENST00000530008 PALM3A6NDB9 673 aaPredicted RBP11.07□□□□□ -0.64
CAPRIN1-208ENST00000530008 PATL2C9JE40 543 aaKnown RBP11.07□□□□□ -0.64
CAPRIN1-208ENST00000530008 FAM98CQ17RN3 349 aaKnown RBP11.07□□□□□ -0.64
CAPRIN1-208ENST00000530008 SOX11P35716 441 aa11.06□□□□□ -0.64
CAPRIN1-208ENST00000530008 ATP6V1AP38606 617 aa11.06□□□□□ -0.64
CAPRIN1-208ENST00000530008 PRR7Q8TB68 274 aa11.06□□□□□ -0.64
CAPRIN1-208ENST00000530008 SYMPKQ92797 1274 aaKnown RBP11.06□□□□□ -0.64
CAPRIN1-208ENST00000530008 ARHGAP33O14559 1287 aa11.05□□□□□ -0.64
CAPRIN1-208ENST00000530008 BRD1O95696 1058 aa11.05□□□□□ -0.64
CAPRIN1-208ENST00000530008 NR6A1Q15406 480 aa11.05□□□□□ -0.64
CAPRIN1-208ENST00000530008 UCN2Q96RP3 112 aa11.05□□□□□ -0.64
CAPRIN1-208ENST00000530008 LMOD1P29536 600 aaPredicted RBP11.04□□□□□ -0.64
CAPRIN1-208ENST00000530008 KCNA1Q09470 495 aa11.04□□□□□ -0.64
CAPRIN1-208ENST00000530008 SAMD7Q7Z3H4 446 aa11.04□□□□□ -0.64
CAPRIN1-208ENST00000530008 RGS22Q8NE09 1264 aa11.04□□□□□ -0.64
CAPRIN1-208ENST00000530008 TFIP11Q9UBB9 837 aaKnown RBP11.04□□□□□ -0.64
CAPRIN1-208ENST00000530008 MFAP1P55081 439 aaKnown RBP11.03□□□□□ -0.64
CAPRIN1-208ENST00000530008 PER1O15534 1290 aaPredicted RBP11.02□□□□□ -0.65
CAPRIN1-208ENST00000530008 DMRTA1Q5VZB9 504 aa11.02□□□□□ -0.65
CAPRIN1-208ENST00000530008 SEMA3FQ13275 785 aa11.01□□□□□ -0.65
CAPRIN1-208ENST00000530008 POTEEQ6S8J3 1075 aa11.01□□□□□ -0.65
CAPRIN1-208ENST00000530008 RETREG3Q86VR2 466 aa11.01□□□□□ -0.65
CAPRIN1-208ENST00000530008 PNMA1Q8ND90 353 aa11.01□□□□□ -0.65
CAPRIN1-208ENST00000530008 RNF40O75150 1001 aa11□□□□□ -0.65
CAPRIN1-208ENST00000530008 KMT5BQ4FZB7 885 aa11□□□□□ -0.65
CAPRIN1-208ENST00000530008 LAPTM4BQ86VI4 370 aa11□□□□□ -0.65
CAPRIN1-208ENST00000530008 MTMR7Q9Y216 660 aa11□□□□□ -0.65
CAPRIN1-208ENST00000530008 CARNS1A5YM72 827 aa10.99□□□□□ -0.65
CAPRIN1-208ENST00000530008 MORN1Q5T089 497 aa10.99□□□□□ -0.65
CAPRIN1-208ENST00000530008 VPS9D1Q9Y2B5 631 aa10.99□□□□□ -0.65
CAPRIN1-208ENST00000530008 MAFBQ9Y5Q3 323 aaPredicted RBP10.99□□□□□ -0.65
CAPRIN1-208ENST00000530008 ATG7O95352 703 aa10.98□□□□□ -0.65
CAPRIN1-208ENST00000530008 DESI1Q6ICB0 168 aa10.98□□□□□ -0.65
CAPRIN1-208ENST00000530008 AXIN2Q9Y2T1 843 aa10.98□□□□□ -0.65
CAPRIN1-208ENST00000530008 EIF4G2P78344 907 aaKnown RBP eCLIP10.97□□□□□ -0.65
CAPRIN1-208ENST00000530008 Q3C1V9 767 aa10.97□□□□□ -0.65
CAPRIN1-208ENST00000530008 CDCA8Q53HL2 280 aa10.97□□□□□ -0.65
CAPRIN1-208ENST00000530008 VARS2Q5ST30 1063 aaKnown RBP10.97□□□□□ -0.65
CAPRIN1-208ENST00000530008 ERBB3P21860 1342 aa10.96□□□□□ -0.65
CAPRIN1-208ENST00000530008 TBC1D9Q6ZT07 1266 aa10.96□□□□□ -0.65
CAPRIN1-208ENST00000530008 SLC27A5Q9Y2P5 690 aa10.96□□□□□ -0.65
CAPRIN1-208ENST00000530008 ACTN4O43707 911 aaKnown RBP10.95□□□□□ -0.66
CAPRIN1-208ENST00000530008 PBX2P40425 430 aa10.95□□□□□ -0.66
CAPRIN1-208ENST00000530008 PUS10Q3MIT2 529 aaKnown RBP10.95□□□□□ -0.66
CAPRIN1-208ENST00000530008 NBPF3Q9H094 633 aa10.95□□□□□ -0.66
CAPRIN1-208ENST00000530008 ATP9BO43861 1147 aa10.94□□□□□ -0.66
CAPRIN1-208ENST00000530008 NR1H3Q13133 447 aa10.94□□□□□ -0.66
CAPRIN1-208ENST00000530008 LYPD8Q6UX82 237 aa10.94□□□□□ -0.66
CAPRIN1-208ENST00000530008 TMEM88BA6NKF7 163 aa10.93□□□□□ -0.66
CAPRIN1-208ENST00000530008 ZFRQ96KR1 1074 aaKnown RBP10.93□□□□□ -0.66
CAPRIN1-208ENST00000530008 VRTNQ9H8Y1 702 aa10.93□□□□□ -0.66
CAPRIN1-208ENST00000530008 BHMG1C9JSJ3 638 aaPredicted RBP10.91□□□□□ -0.66
CAPRIN1-208ENST00000530008 FOXD4L5Q5VV16 416 aaPredicted RBP10.91□□□□□ -0.66
CAPRIN1-208ENST00000530008 FOXD4L4Q8WXT5 416 aaPredicted RBP10.91□□□□□ -0.66
CAPRIN1-208ENST00000530008 IVNS1ABPQ9Y6Y0 642 aa10.91□□□□□ -0.66
CAPRIN1-208ENST00000530008 FBXO45P0C2W1 286 aa10.9□□□□□ -0.66
CAPRIN1-208ENST00000530008 ZBBXA8MT70 800 aa10.89□□□□□ -0.67
CAPRIN1-208ENST00000530008 RNF19BQ6ZMZ0 732 aa10.89□□□□□ -0.67
CAPRIN1-208ENST00000530008 LRCH3Q96II8 777 aa10.89□□□□□ -0.67
CAPRIN1-208ENST00000530008 KANK4Q5T7N3 995 aaPredicted RBP10.88□□□□□ -0.67
CAPRIN1-208ENST00000530008 BLOC1S3Q6QNY0 202 aa10.88□□□□□ -0.67
CAPRIN1-208ENST00000530008 USB1Q9BQ65 265 aaKnown RBP10.88□□□□□ -0.67
CAPRIN1-208ENST00000530008 PRR14Q9BWN1 585 aa10.88□□□□□ -0.67
CAPRIN1-208ENST00000530008 FKBPLQ9UIM3 349 aa10.88□□□□□ -0.67
CAPRIN1-208ENST00000530008 MRPL50Q8N5N7 158 aaKnown RBP10.87□□□□□ -0.67
CAPRIN1-208ENST00000530008 NFATC2IPQ8NCF5 419 aa10.87□□□□□ -0.67
CAPRIN1-208ENST00000530008 PIK3CDO00329 1044 aa10.86□□□□□ -0.67
CAPRIN1-208ENST00000530008 F12P00748 615 aaPredicted RBP10.86□□□□□ -0.67
CAPRIN1-208ENST00000530008 BRICD5Q6PL45 260 aa10.86□□□□□ -0.67
CAPRIN1-208ENST00000530008 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.86□□□□□ -0.67
CAPRIN1-208ENST00000530008 SALL2Q9Y467 1007 aaPredicted RBP10.86□□□□□ -0.67
CAPRIN1-208ENST00000530008 TK2O00142 265 aa10.85□□□□□ -0.67
CAPRIN1-208ENST00000530008 ELOAQ14241 798 aaKnown RBP10.85□□□□□ -0.67
CAPRIN1-208ENST00000530008 ZNF687Q8N1G0 1237 aa10.85□□□□□ -0.67
CAPRIN1-208ENST00000530008 ZC3H4Q9UPT8 1303 aaKnown RBP10.84□□□□□ -0.67
CAPRIN1-208ENST00000530008 B4GALNT3Q6L9W6 998 aa10.83□□□□□ -0.68
CAPRIN1-208ENST00000530008 SND1Q7KZF4 910 aaKnown RBP eCLIP10.83□□□□□ -0.684e-6■□□□□ 9.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms