RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 PCDHGC3Q9UN70 934 aa9.59□□□□□ -0.87
AMBRA1-209ENST00000529963 SPTLC1O15269 473 aa9.58□□□□□ -0.88
AMBRA1-209ENST00000529963 ATP6V1AP38606 617 aa9.58□□□□□ -0.88
AMBRA1-209ENST00000529963 USP46P62068 366 aa9.58□□□□□ -0.88
AMBRA1-209ENST00000529963 FDX1P10109 184 aa9.57□□□□□ -0.88
AMBRA1-209ENST00000529963 QPCTQ16769 361 aa9.57□□□□□ -0.88
AMBRA1-209ENST00000529963 CABLES1Q8TDN4 633 aa9.57□□□□□ -0.88
AMBRA1-209ENST00000529963 NECTIN2Q92692 538 aa9.57□□□□□ -0.88
AMBRA1-209ENST00000529963 SYMPKQ92797 1274 aaKnown RBP9.56□□□□□ -0.88
AMBRA1-209ENST00000529963 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.56□□□□□ -0.88
AMBRA1-209ENST00000529963 THOC2Q8NI27 1593 aaKnown RBP9.56□□□□□ -0.88
AMBRA1-209ENST00000529963 COPS2P61201 443 aa9.56□□□□□ -0.88
AMBRA1-209ENST00000529963 MORN1Q5T089 497 aa9.56□□□□□ -0.88
AMBRA1-209ENST00000529963 RNF166Q96A37 237 aaPredicted RBP9.56□□□□□ -0.88
AMBRA1-209ENST00000529963 SLC27A5Q9Y2P5 690 aa9.56□□□□□ -0.88
AMBRA1-209ENST00000529963 PCDHB3Q9Y5E6 796 aa9.56□□□□□ -0.88
AMBRA1-209ENST00000529963 BLOC1S3Q6QNY0 202 aa9.55□□□□□ -0.88
AMBRA1-209ENST00000529963 MROH2BQ7Z745 1585 aa9.54□□□□□ -0.88
AMBRA1-209ENST00000529963 LAMC3Q9Y6N6 1575 aa9.54□□□□□ -0.88
AMBRA1-209ENST00000529963 GRIPAP1Q4V328 841 aa9.54□□□□□ -0.88
AMBRA1-209ENST00000529963 PRR14Q9BWN1 585 aa9.54□□□□□ -0.88
AMBRA1-209ENST00000529963 NUTM2BA6NNL0 878 aaPredicted RBP9.52□□□□□ -0.88
AMBRA1-209ENST00000529963 NUTM2EB1AL46 878 aaPredicted RBP9.52□□□□□ -0.88
AMBRA1-209ENST00000529963 C6orf229H3BNL8 230 aa9.52□□□□□ -0.88
AMBRA1-209ENST00000529963 RTL5Q5HYW3 569 aaPredicted RBP9.52□□□□□ -0.88
AMBRA1-209ENST00000529963 NUTM2DQ5VT03 806 aaPredicted RBP9.52□□□□□ -0.88
AMBRA1-209ENST00000529963 NUTM2AQ8IVF1 878 aaPredicted RBP9.52□□□□□ -0.88
AMBRA1-209ENST00000529963 PDS5BQ9NTI5 1447 aa9.52□□□□□ -0.89
AMBRA1-209ENST00000529963 HRCP23327 699 aa9.51□□□□□ -0.89
AMBRA1-209ENST00000529963 RNF19BQ6ZMZ0 732 aa9.51□□□□□ -0.89
AMBRA1-209ENST00000529963 LILRB3O75022 631 aa9.51□□□□□ -0.89
AMBRA1-209ENST00000529963 SCUBE3Q8IX30 993 aa9.51□□□□□ -0.89
AMBRA1-209ENST00000529963 GJA5P36382 358 aa9.5□□□□□ -0.89
AMBRA1-209ENST00000529963 RFC5P40937 340 aa9.49□□□□□ -0.89
AMBRA1-209ENST00000529963 MMRN1Q13201 1228 aa9.49□□□□□ -0.89
AMBRA1-209ENST00000529963 MTMR2Q13614 643 aa9.49□□□□□ -0.89
AMBRA1-209ENST00000529963 TUSC1Q2TAM9 212 aa9.49□□□□□ -0.89
AMBRA1-209ENST00000529963 MTRQ99707 1265 aa9.49□□□□□ -0.89
AMBRA1-209ENST00000529963 ZBTB3Q9H5J0 574 aa9.49□□□□□ -0.89
AMBRA1-209ENST00000529963 ZNF516Q92618 1163 aa9.48□□□□□ -0.89
AMBRA1-209ENST00000529963 TLL1O43897 1013 aa9.47□□□□□ -0.89
AMBRA1-209ENST00000529963 TSC1Q92574 1164 aa9.47□□□□□ -0.89
AMBRA1-209ENST00000529963 CADPSQ9ULU8 1353 aa9.47□□□□□ -0.89
AMBRA1-209ENST00000529963 NR1I2O75469 434 aa9.46□□□□□ -0.89
AMBRA1-209ENST00000529963 PRPF38BQ5VTL8 546 aaKnown RBP9.46□□□□□ -0.89
AMBRA1-209ENST00000529963 NYAP1Q6ZVC0 841 aa9.46□□□□□ -0.89
AMBRA1-209ENST00000529963 HCSTQ9UBK5 93 aa9.46□□□□□ -0.89
AMBRA1-209ENST00000529963 CFAP99D6REC4 459 aa9.46□□□□□ -0.9
AMBRA1-209ENST00000529963 PPP2R2DQ66LE6 453 aa9.46□□□□□ -0.9
AMBRA1-209ENST00000529963 BRICD5Q6PL45 260 aa9.46□□□□□ -0.9
AMBRA1-209ENST00000529963 KIF21AQ7Z4S6 1674 aa9.45□□□□□ -0.9
AMBRA1-209ENST00000529963 AP1G2O75843 785 aa9.45□□□□□ -0.9
AMBRA1-209ENST00000529963 Q3C1V9 767 aa9.45□□□□□ -0.9
AMBRA1-209ENST00000529963 TJAP1Q5JTD0 557 aa9.45□□□□□ -0.9
AMBRA1-209ENST00000529963 THAP11Q96EK4 314 aa9.45□□□□□ -0.9
AMBRA1-209ENST00000529963 PRR7Q8TB68 274 aa9.44□□□□□ -0.9
AMBRA1-209ENST00000529963 ZPR1O75312 459 aa9.43□□□□□ -0.9
AMBRA1-209ENST00000529963 FMNL1O95466 1100 aaPredicted RBP9.43□□□□□ -0.9
AMBRA1-209ENST00000529963 NKX2-3Q8TAU0 364 aa9.42□□□□□ -0.9
AMBRA1-209ENST00000529963 MRC2Q9UBG0 1479 aa9.42□□□□□ -0.9
AMBRA1-209ENST00000529963 CTDSPL2Q05D32 466 aa9.41□□□□□ -0.9
AMBRA1-209ENST00000529963 RETREG3Q86VR2 466 aa9.41□□□□□ -0.9
AMBRA1-209ENST00000529963 SPSB2Q99619 263 aa9.41□□□□□ -0.9
AMBRA1-209ENST00000529963 USB1Q9BQ65 265 aaKnown RBP9.41□□□□□ -0.9
AMBRA1-209ENST00000529963 IL21Q9HBE4 155 aa9.41□□□□□ -0.9
AMBRA1-209ENST00000529963 PRDM9Q9NQV7 894 aa9.41□□□□□ -0.9
AMBRA1-209ENST00000529963 SNRKQ9NRH2 765 aa9.41□□□□□ -0.9
AMBRA1-209ENST00000529963 WIZO95785 1651 aa9.41□□□□□ -0.9
AMBRA1-209ENST00000529963 FAM160A2Q8N612 972 aaPredicted RBP9.41□□□□□ -0.9
AMBRA1-209ENST00000529963 TIMELESSQ9UNS1 1208 aa9.41□□□□□ -0.9
AMBRA1-209ENST00000529963 SALL2Q9Y467 1007 aaPredicted RBP9.4□□□□□ -0.91
AMBRA1-209ENST00000529963 SPDYE5A6NIY4 337 aa9.39□□□□□ -0.91
AMBRA1-209ENST00000529963 TMEM259Q4ZIN3 620 aa9.39□□□□□ -0.91
AMBRA1-209ENST00000529963 PER1O15534 1290 aaPredicted RBP9.38□□□□□ -0.91
AMBRA1-209ENST00000529963 WDR62O43379 1518 aa9.38□□□□□ -0.91
AMBRA1-209ENST00000529963 USP17L8P0C7I0 530 aa9.38□□□□□ -0.91
AMBRA1-209ENST00000529963 C14orf37Q86TY3 774 aa9.38□□□□□ -0.91
AMBRA1-209ENST00000529963 LRRN4Q8WUT4 740 aa9.38□□□□□ -0.91
AMBRA1-209ENST00000529963 CEP164Q9UPV0 1460 aa9.37□□□□□ -0.91
AMBRA1-209ENST00000529963 MCM6Q14566 821 aa9.37□□□□□ -0.91
AMBRA1-209ENST00000529963 ADH1BP00325 375 aa9.36□□□□□ -0.91
AMBRA1-209ENST00000529963 HELBQ8NG08 1087 aaPredicted RBP9.36□□□□□ -0.91
AMBRA1-209ENST00000529963 HMX1Q9NP08 348 aaPredicted RBP9.36□□□□□ -0.91
AMBRA1-209ENST00000529963 RIMBP3CA6NJZ7 1639 aa9.36□□□□□ -0.91
AMBRA1-209ENST00000529963 RIMBP3BA6NNM3 1639 aa9.36□□□□□ -0.91
AMBRA1-209ENST00000529963 RIMBP3Q9UFD9 1639 aa9.36□□□□□ -0.91
AMBRA1-209ENST00000529963 FANCD2Q9BXW9 1451 aa9.35□□□□□ -0.91
AMBRA1-209ENST00000529963 S1PR4O95977 384 aa9.34□□□□□ -0.91
AMBRA1-209ENST00000529963 JUNDP17535 347 aa9.34□□□□□ -0.91
AMBRA1-209ENST00000529963 KCNC4Q03721 635 aa9.34□□□□□ -0.91
AMBRA1-209ENST00000529963 FLIIQ13045 1269 aa9.34□□□□□ -0.91
AMBRA1-209ENST00000529963 MTMR14Q8NCE2 650 aa9.34□□□□□ -0.91
AMBRA1-209ENST00000529963 BANK1Q8NDB2 785 aa9.34□□□□□ -0.91
AMBRA1-209ENST00000529963 CFTRP13569 1480 aa9.34□□□□□ -0.91
AMBRA1-209ENST00000529963 RSF1Q96T23 1441 aaPredicted RBP9.34□□□□□ -0.91
AMBRA1-209ENST00000529963 MSS51Q4VC12 460 aa9.33□□□□□ -0.92
AMBRA1-209ENST00000529963 TOP2AP11388 1531 aaKnown RBP9.32□□□□□ -0.92
AMBRA1-209ENST00000529963 ITGBL1O95965 494 aaPredicted RBP9.32□□□□□ -0.92
AMBRA1-209ENST00000529963 EPS8L1Q8TE68 723 aa9.32□□□□□ -0.92
AMBRA1-209ENST00000529963 SLC6A16Q9GZN6 736 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms