RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 PLPPR3Q6T4P5 718 aa20.81■□□□□ 0.92
CCDC90B-213ENST00000529611 LTKP29376 864 aa20.8■□□□□ 0.92
CCDC90B-213ENST00000529611 SLIT1O75093 1534 aa20.8■□□□□ 0.92
CCDC90B-213ENST00000529611 ANKRD36BQ8N2N9 1353 aa20.8■□□□□ 0.92
CCDC90B-213ENST00000529611 PLEKHG1Q9ULL1 1385 aa20.8■□□□□ 0.92
CCDC90B-213ENST00000529611 ADAMTS13Q76LX8 1427 aa20.79■□□□□ 0.92
CCDC90B-213ENST00000529611 SRPK2P78362 688 aaKnown RBP20.79■□□□□ 0.92
CCDC90B-213ENST00000529611 USP32Q8NFA0 1604 aa20.79■□□□□ 0.92
CCDC90B-213ENST00000529611 ARHGAP23Q9P227 1491 aa20.79■□□□□ 0.92
CCDC90B-213ENST00000529611 PLEKHH1Q9ULM0 1364 aa20.79■□□□□ 0.92
CCDC90B-213ENST00000529611 NINLQ9Y2I6 1382 aa20.79■□□□□ 0.92
CCDC90B-213ENST00000529611 KNDC1Q76NI1 1749 aa20.79■□□□□ 0.92
CCDC90B-213ENST00000529611 ATAD2Q6PL18 1390 aa20.78■□□□□ 0.92
CCDC90B-213ENST00000529611 WAPLQ7Z5K2 1190 aa20.78■□□□□ 0.92
CCDC90B-213ENST00000529611 TECPR2O15040 1411 aa20.78■□□□□ 0.92
CCDC90B-213ENST00000529611 RIMS1Q86UR5 1692 aaKnown RBP20.77■□□□□ 0.91
CCDC90B-213ENST00000529611 TXNDC2Q86VQ3 553 aa20.76■□□□□ 0.91
CCDC90B-213ENST00000529611 BCANQ96GW7 911 aa20.76■□□□□ 0.91
CCDC90B-213ENST00000529611 INSRP06213 1382 aa20.76■□□□□ 0.91
CCDC90B-213ENST00000529611 CPS1P31327 1500 aa20.75■□□□□ 0.91
CCDC90B-213ENST00000529611 CDK19Q9BWU1 502 aa20.75■□□□□ 0.91
CCDC90B-213ENST00000529611 SUPT16HQ9Y5B9 1047 aaKnown RBP20.75■□□□□ 0.91
CCDC90B-213ENST00000529611 FAM135BQ49AJ0 1406 aa20.74■□□□□ 0.91
CCDC90B-213ENST00000529611 MED14O60244 1454 aa20.74■□□□□ 0.91
CCDC90B-213ENST00000529611 EID1Q9Y6B2 187 aa20.74■□□□□ 0.91
CCDC90B-213ENST00000529611 A0A1W2PP64 1363 aa20.73■□□□□ 0.91
CCDC90B-213ENST00000529611 SIRT1Q96EB6 747 aa20.73■□□□□ 0.91
CCDC90B-213ENST00000529611 ADAMTSL3P82987 1691 aa20.73■□□□□ 0.91
CCDC90B-213ENST00000529611 BLMP54132 1417 aaPredicted RBP20.72■□□□□ 0.91
CCDC90B-213ENST00000529611 CGNL1Q0VF96 1302 aa20.72■□□□□ 0.91
CCDC90B-213ENST00000529611 THEMISQ8N1K5 641 aaPredicted RBP20.72■□□□□ 0.91
CCDC90B-213ENST00000529611 SENP3-EIF4A1A0A087X0R7 540 aa20.71■□□□□ 0.91
CCDC90B-213ENST00000529611 CD163L1Q9NR16 1453 aa20.71■□□□□ 0.91
CCDC90B-213ENST00000529611 CEP170BQ9Y4F5 1589 aaPredicted RBP20.7■□□□□ 0.9
CCDC90B-213ENST00000529611 NSD2O96028 1365 aa20.69■□□□□ 0.9
CCDC90B-213ENST00000529611 MORC1Q86VD1 984 aa20.68■□□□□ 0.9
CCDC90B-213ENST00000529611 ROBO2Q9HCK4 1378 aa20.68■□□□□ 0.9
CCDC90B-213ENST00000529611 SMG6Q86US8 1419 aaKnown RBP20.67■□□□□ 0.9
CCDC90B-213ENST00000529611 TERF2IPQ9NYB0 399 aa20.67■□□□□ 0.9
CCDC90B-213ENST00000529611 ADAMTS8Q9UP79 889 aa20.67■□□□□ 0.9
CCDC90B-213ENST00000529611 FKBP8Q14318 412 aa20.66■□□□□ 0.9
CCDC90B-213ENST00000529611 SLC26A8Q96RN1 970 aa20.66■□□□□ 0.9
CCDC90B-213ENST00000529611 WASLO00401 505 aaPredicted RBP20.66■□□□□ 0.9
CCDC90B-213ENST00000529611 PTPRUQ92729 1446 aa20.66■□□□□ 0.9
CCDC90B-213ENST00000529611 NEFLP07196 543 aa20.65■□□□□ 0.9
CCDC90B-213ENST00000529611 WDR43Q15061 677 aaKnown RBP eCLIP20.65■□□□□ 0.9
CCDC90B-213ENST00000529611 CABP1Q9NZU7 370 aa20.65■□□□□ 0.9
CCDC90B-213ENST00000529611 TBX22Q9Y458 520 aa20.64■□□□□ 0.89
CCDC90B-213ENST00000529611 POLR3AO14802 1390 aaPredicted RBP20.63■□□□□ 0.89
CCDC90B-213ENST00000529611 DIP2AQ14689 1571 aa20.63■□□□□ 0.89
CCDC90B-213ENST00000529611 NUDCQ9Y266 331 aa20.63■□□□□ 0.89
CCDC90B-213ENST00000529611 ATP7BP35670 1465 aa20.63■□□□□ 0.89
CCDC90B-213ENST00000529611 HDGFL2Q7Z4V5 671 aaPredicted RBP20.63■□□□□ 0.89
CCDC90B-213ENST00000529611 ZNF142P52746 1687 aaPredicted RBP20.62■□□□□ 0.89
CCDC90B-213ENST00000529611 TNNT2P45379 298 aaPredicted RBP20.62■□□□□ 0.89
CCDC90B-213ENST00000529611 ADGRB2O60241 1585 aa20.61■□□□□ 0.89
CCDC90B-213ENST00000529611 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.6■□□□□ 0.89
CCDC90B-213ENST00000529611 SALL2Q9Y467 1007 aaPredicted RBP20.59■□□□□ 0.89
CCDC90B-213ENST00000529611 SETD1BQ9UPS6 1966 aaKnown RBP20.59■□□□□ 0.89
CCDC90B-213ENST00000529611 PPIP5K1Q6PFW1 1433 aa20.59■□□□□ 0.89
CCDC90B-213ENST00000529611 ANKRD26Q9UPS8 1709 aa20.58■□□□□ 0.89
CCDC90B-213ENST00000529611 FYB1O15117 783 aa20.58■□□□□ 0.89
CCDC90B-213ENST00000529611 AMOTL2Q9Y2J4 779 aa20.58■□□□□ 0.89
CCDC90B-213ENST00000529611 PTCH1Q13635 1447 aa20.57■□□□□ 0.88
CCDC90B-213ENST00000529611 NUDT16Q96DE0 195 aaKnown RBP20.57■□□□□ 0.88
CCDC90B-213ENST00000529611 GGNBP2Q9H3C7 697 aa20.57■□□□□ 0.88
CCDC90B-213ENST00000529611 CPSF1Q10570 1443 aaKnown RBP20.57■□□□□ 0.88
CCDC90B-213ENST00000529611 SHPRHQ149N8 1683 aa20.56■□□□□ 0.88
CCDC90B-213ENST00000529611 MTHFSP49914 203 aa20.55■□□□□ 0.88
CCDC90B-213ENST00000529611 PDE3BQ13370 1112 aa20.55■□□□□ 0.88
CCDC90B-213ENST00000529611 CCDC61Q9Y6R9 512 aa20.55■□□□□ 0.88
CCDC90B-213ENST00000529611 KIF20BQ96Q89 1820 aa20.55■□□□□ 0.88
CCDC90B-213ENST00000529611 XRN1Q8IZH2 1706 aaKnown RBP20.55■□□□□ 0.88
CCDC90B-213ENST00000529611 CDC42BPGQ6DT37 1551 aa20.54■□□□□ 0.88
CCDC90B-213ENST00000529611 PRR36Q9H6K5 1346 aa20.54■□□□□ 0.88
CCDC90B-213ENST00000529611 NCKAP5LQ9HCH0 1330 aa20.54■□□□□ 0.88
CCDC90B-213ENST00000529611 PIK3R4Q99570 1358 aa20.52■□□□□ 0.88
CCDC90B-213ENST00000529611 EDC4Q6P2E9 1401 aaKnown RBP20.52■□□□□ 0.87
CCDC90B-213ENST00000529611 ANKLE2Q86XL3 938 aa20.52■□□□□ 0.87
CCDC90B-213ENST00000529611 CCDC146Q8IYE0 955 aa20.5■□□□□ 0.87
CCDC90B-213ENST00000529611 MON2Q7Z3U7 1717 aa20.5■□□□□ 0.87
CCDC90B-213ENST00000529611 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.5■□□□□ 0.873e-6■■■■□ 25.7
CCDC90B-213ENST00000529611 CFAP53Q96M91 514 aa20.5■□□□□ 0.87
CCDC90B-213ENST00000529611 TOPAZ1Q8N9V7 1692 aa20.5■□□□□ 0.87
CCDC90B-213ENST00000529611 AKAP12Q02952 1782 aa20.49■□□□□ 0.87
CCDC90B-213ENST00000529611 IRX6P78412 446 aaPredicted RBP20.49■□□□□ 0.87
CCDC90B-213ENST00000529611 CDCA7LQ96GN5 454 aa20.49■□□□□ 0.87
CCDC90B-213ENST00000529611 ITSN1Q15811 1721 aa20.47■□□□□ 0.87
CCDC90B-213ENST00000529611 RNF123Q5XPI4 1314 aa20.47■□□□□ 0.87
CCDC90B-213ENST00000529611 ZNF521Q96K83 1311 aa20.47■□□□□ 0.87
CCDC90B-213ENST00000529611 KCNA6P17658 529 aa20.46■□□□□ 0.87
CCDC90B-213ENST00000529611 APAF1O14727 1248 aa20.46■□□□□ 0.87
CCDC90B-213ENST00000529611 COL3A1P02461 1466 aaPredicted RBP20.45■□□□□ 0.86
CCDC90B-213ENST00000529611 ZNF692Q9BU19 519 aaPredicted RBP20.45■□□□□ 0.86
CCDC90B-213ENST00000529611 NKTRP30414 1462 aaKnown RBP20.44■□□□□ 0.86
CCDC90B-213ENST00000529611 PLEKHG3A1L390 1219 aa20.43■□□□□ 0.86
CCDC90B-213ENST00000529611 NUTM2FA1L443 756 aa20.43■□□□□ 0.86
CCDC90B-213ENST00000529611 CHD2O14647 1828 aaKnown RBP20.43■□□□□ 0.86
CCDC90B-213ENST00000529611 ERICH6BQ5W0A0 696 aa20.43■□□□□ 0.86
CCDC90B-213ENST00000529611 NME9Q86XW9 330 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms