RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 SAMD1Q6SPF0 538 aaPredicted RBP9.87□□□□□ -0.83
CTNND1-220ENST00000529526 ANKRD50Q9ULJ7 1429 aa9.87□□□□□ -0.83
CTNND1-220ENST00000529526 MTHFSP49914 203 aa9.87□□□□□ -0.83
CTNND1-220ENST00000529526 RAPGEF4Q8WZA2 1011 aa9.87□□□□□ -0.83
CTNND1-220ENST00000529526 NLRP2Q9NX02 1062 aa9.87□□□□□ -0.83
CTNND1-220ENST00000529526 CTDP1Q9Y5B0 961 aaPredicted RBP9.87□□□□□ -0.83
CTNND1-220ENST00000529526 NCOA2Q15596 1464 aa9.87□□□□□ -0.83
CTNND1-220ENST00000529526 ARHGAP5Q13017 1502 aa9.86□□□□□ -0.83
CTNND1-220ENST00000529526 ERICH2A1L162 156 aa9.86□□□□□ -0.83
CTNND1-220ENST00000529526 WASHC4Q2M389 1173 aa9.86□□□□□ -0.83
CTNND1-220ENST00000529526 C1orf115Q9H7X2 142 aa9.86□□□□□ -0.83
CTNND1-220ENST00000529526 ERC2O15083 957 aa9.86□□□□□ -0.83
CTNND1-220ENST00000529526 UBTFL1P0CB47 393 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-220ENST00000529526 MIA2Q96PC5 1412 aa9.86□□□□□ -0.83
CTNND1-220ENST00000529526 ZNF428Q96B54 188 aa9.86□□□□□ -0.83
CTNND1-220ENST00000529526 RSPH6AQ9H0K4 717 aa9.86□□□□□ -0.83
CTNND1-220ENST00000529526 CFAP70Q5T0N1 1121 aa9.85□□□□□ -0.83
CTNND1-220ENST00000529526 CCDC27Q2M243 656 aa9.85□□□□□ -0.83
CTNND1-220ENST00000529526 MTMR7Q9Y216 660 aa9.85□□□□□ -0.83
CTNND1-220ENST00000529526 CDC45O75419 566 aa9.85□□□□□ -0.83
CTNND1-220ENST00000529526 ATF3P18847 181 aa9.85□□□□□ -0.83
CTNND1-220ENST00000529526 NLRP6P59044 892 aa9.85□□□□□ -0.83
CTNND1-220ENST00000529526 SASS6Q6UVJ0 657 aa9.85□□□□□ -0.83
CTNND1-220ENST00000529526 HOMER1Q86YM7 354 aa9.85□□□□□ -0.83
CTNND1-220ENST00000529526 TCP11L2Q8N4U5 519 aa9.84□□□□□ -0.83
CTNND1-220ENST00000529526 FAM177BA6PVY3 158 aa9.84□□□□□ -0.83
CTNND1-220ENST00000529526 HSP90AB4PQ58FF6 505 aa9.84□□□□□ -0.83
CTNND1-220ENST00000529526 PPP2R1AP30153 589 aa9.84□□□□□ -0.83
CTNND1-220ENST00000529526 AFAP1Q8N556 730 aa9.83□□□□□ -0.84
CTNND1-220ENST00000529526 CCDC47Q96A33 483 aaKnown RBP9.83□□□□□ -0.84
CTNND1-220ENST00000529526 NUCB2P80303 420 aa9.83□□□□□ -0.84
CTNND1-220ENST00000529526 FYCO1Q9BQS8 1478 aa9.83□□□□□ -0.84
CTNND1-220ENST00000529526 BRD4O60885 1362 aaPredicted RBP9.83□□□□□ -0.84
CTNND1-220ENST00000529526 EXOSC9Q06265 439 aaKnown RBP9.83□□□□□ -0.84
CTNND1-220ENST00000529526 NFKBIBQ15653 356 aa9.83□□□□□ -0.84
CTNND1-220ENST00000529526 CCDC70Q6NSX1 233 aa9.83□□□□□ -0.84
CTNND1-220ENST00000529526 KLHL34Q8N239 644 aa9.83□□□□□ -0.84
CTNND1-220ENST00000529526 RBM33Q96EV2 1170 aaKnown RBP9.83□□□□□ -0.84
CTNND1-220ENST00000529526 DNAJC2Q99543 621 aaKnown RBP9.83□□□□□ -0.84
CTNND1-220ENST00000529526 HOOK1Q9UJC3 728 aaKnown RBP9.83□□□□□ -0.84
CTNND1-220ENST00000529526 PRKAR2BP31323 418 aa9.83□□□□□ -0.84
CTNND1-220ENST00000529526 NBPF1Q3BBV0 1214 aa9.83□□□□□ -0.84
CTNND1-220ENST00000529526 ANKRD20A12PQ8NF67 263 aa9.83□□□□□ -0.84
CTNND1-220ENST00000529526 RALYLQ86SE5 291 aaKnown RBP9.82□□□□□ -0.84
CTNND1-220ENST00000529526 FSD1Q9BTV5 496 aa9.82□□□□□ -0.84
CTNND1-220ENST00000529526 FAM13BQ9NYF5 915 aa9.82□□□□□ -0.84
CTNND1-220ENST00000529526 PATL2C9JE40 543 aaKnown RBP9.82□□□□□ -0.84
CTNND1-220ENST00000529526 TSR2Q969E8 191 aaKnown RBP9.82□□□□□ -0.84
CTNND1-220ENST00000529526 NINLQ9Y2I6 1382 aa9.82□□□□□ -0.84
CTNND1-220ENST00000529526 ABTB2Q8N961 1025 aa9.82□□□□□ -0.84
CTNND1-220ENST00000529526 CNTROBQ8N137 903 aa9.82□□□□□ -0.84
CTNND1-220ENST00000529526 IPO7O95373 1038 aaKnown RBP9.82□□□□□ -0.84
CTNND1-220ENST00000529526 CCDC73Q6ZRK6 1079 aa9.82□□□□□ -0.84
CTNND1-220ENST00000529526 NOB1Q9ULX3 412 aaKnown RBP9.82□□□□□ -0.84
CTNND1-220ENST00000529526 ZNF771Q7L3S4 317 aaPredicted RBP9.81□□□□□ -0.84
CTNND1-220ENST00000529526 CASKIN1Q8WXD9 1431 aa9.81□□□□□ -0.84
CTNND1-220ENST00000529526 SURF6O75683 361 aaKnown RBP9.81□□□□□ -0.84
CTNND1-220ENST00000529526 PRAM1Q96QH2 718 aa9.81□□□□□ -0.84
CTNND1-220ENST00000529526 PDZRN3Q9UPQ7 1066 aa9.81□□□□□ -0.84
CTNND1-220ENST00000529526 ESCO1Q5FWF5 840 aa9.81□□□□□ -0.84
CTNND1-220ENST00000529526 IFT57Q9NWB7 429 aa9.81□□□□□ -0.84
CTNND1-220ENST00000529526 SAFBQ15424 915 aaKnown RBP eCLIP9.81□□□□□ -0.84
CTNND1-220ENST00000529526 RNF214Q8ND24 703 aa9.81□□□□□ -0.84
CTNND1-220ENST00000529526 CFTRP13569 1480 aa9.81□□□□□ -0.84
CTNND1-220ENST00000529526 BCAR3O75815 825 aa9.81□□□□□ -0.84
CTNND1-220ENST00000529526 CCDC30Q5VVM6 783 aa9.81□□□□□ -0.84
CTNND1-220ENST00000529526 NAP1L1P55209 391 aaKnown RBP9.8□□□□□ -0.84
CTNND1-220ENST00000529526 FBXO3Q9UK99 471 aa9.8□□□□□ -0.84
CTNND1-220ENST00000529526 RRBP1Q9P2E9 1410 aaKnown RBP9.8□□□□□ -0.84
CTNND1-220ENST00000529526 GPS2Q13227 327 aa9.8□□□□□ -0.84
CTNND1-220ENST00000529526 TWISTNBQ3B726 338 aaPredicted RBP9.8□□□□□ -0.84
CTNND1-220ENST00000529526 TXNDC2Q86VQ3 553 aa9.8□□□□□ -0.84
CTNND1-220ENST00000529526 MAP4K4O95819 1239 aaPredicted RBP9.79□□□□□ -0.84
CTNND1-220ENST00000529526 VSIG10Q8N0Z9 540 aa9.79□□□□□ -0.84
CTNND1-220ENST00000529526 RBM42Q9BTD8 480 aaKnown RBP9.79□□□□□ -0.84
CTNND1-220ENST00000529526 AKNAQ7Z591 1439 aa9.79□□□□□ -0.84
CTNND1-220ENST00000529526 PDILTQ8N807 584 aa9.79□□□□□ -0.84
CTNND1-220ENST00000529526 CCDC43Q96MW1 224 aaKnown RBP9.79□□□□□ -0.84
CTNND1-220ENST00000529526 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.78□□□□□ -0.84
CTNND1-220ENST00000529526 PSMA5P28066 241 aa9.78□□□□□ -0.84
CTNND1-220ENST00000529526 CAVIN1Q6NZI2 390 aaKnown RBP9.78□□□□□ -0.84
CTNND1-220ENST00000529526 SLC12A5Q9H2X9 1139 aa9.78□□□□□ -0.84
CTNND1-220ENST00000529526 SETQ01105 290 aaPredicted RBP9.78□□□□□ -0.84
CTNND1-220ENST00000529526 NEK4P51957 841 aa9.78□□□□□ -0.84
CTNND1-220ENST00000529526 STK11IPQ8N1F8 1099 aa9.78□□□□□ -0.84
CTNND1-220ENST00000529526 CLASRPQ8N2M8 674 aaKnown RBP9.78□□□□□ -0.84
CTNND1-220ENST00000529526 FAM43AQ8N2R8 423 aa9.78□□□□□ -0.84
CTNND1-220ENST00000529526 GAS2L2Q8NHY3 880 aa9.78□□□□□ -0.84
CTNND1-220ENST00000529526 STRN4Q9NRL3 753 aa9.78□□□□□ -0.84
CTNND1-220ENST00000529526 ATP2B1P20020 1258 aa9.77□□□□□ -0.85
CTNND1-220ENST00000529526 NASPP49321 788 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-220ENST00000529526 CDK19Q9BWU1 502 aa9.77□□□□□ -0.85
CTNND1-220ENST00000529526 ARAP1Q96P48 1450 aa9.77□□□□□ -0.85
CTNND1-220ENST00000529526 GNAI3P08754 354 aa9.77□□□□□ -0.85
CTNND1-220ENST00000529526 CEBPZQ03701 1054 aaKnown RBP9.77□□□□□ -0.85
CTNND1-220ENST00000529526 STAC3Q96MF2 364 aa9.77□□□□□ -0.85
CTNND1-220ENST00000529526 GPRASP1Q5JY77 1395 aa9.77□□□□□ -0.85
CTNND1-220ENST00000529526 SLC4A2P04920 1241 aa9.77□□□□□ -0.85
CTNND1-220ENST00000529526 NBPF8Q3BBV2 869 aa9.77□□□□□ -0.85
CTNND1-220ENST00000529526 RRP12Q5JTH9 1297 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 601.2 ms