RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 STK26Q9P289 416 aa11.47□□□□□ -0.57
CCDC90B-212ENST00000529312 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.46□□□□□ -0.58
CCDC90B-212ENST00000529312 ADGRL3Q9HAR2 1447 aa11.45□□□□□ -0.58
CCDC90B-212ENST00000529312 ABCC11Q96J66 1382 aa11.45□□□□□ -0.58
CCDC90B-212ENST00000529312 NUTM2BA6NNL0 878 aaPredicted RBP11.45□□□□□ -0.58
CCDC90B-212ENST00000529312 NUTM2EB1AL46 878 aaPredicted RBP11.45□□□□□ -0.58
CCDC90B-212ENST00000529312 POTEAQ6S8J7 498 aa11.45□□□□□ -0.58
CCDC90B-212ENST00000529312 NUTM2AQ8IVF1 878 aaPredicted RBP11.45□□□□□ -0.58
CCDC90B-212ENST00000529312 DHX57Q6P158 1386 aaKnown RBP11.44□□□□□ -0.58
CCDC90B-212ENST00000529312 RAB3GAP2Q9H2M9 1393 aa11.44□□□□□ -0.58
CCDC90B-212ENST00000529312 ESCO1Q5FWF5 840 aa11.44□□□□□ -0.58
CCDC90B-212ENST00000529312 TMEM132EQ6IEE7 984 aa11.44□□□□□ -0.58
CCDC90B-212ENST00000529312 MST1RQ04912 1400 aa11.43□□□□□ -0.58
CCDC90B-212ENST00000529312 PTCH1Q13635 1447 aa11.43□□□□□ -0.58
CCDC90B-212ENST00000529312 SPATA31E1Q6ZUB1 1445 aa11.43□□□□□ -0.58
CCDC90B-212ENST00000529312 ROBO2Q9HCK4 1378 aa11.43□□□□□ -0.58
CCDC90B-212ENST00000529312 WAPLQ7Z5K2 1190 aa11.43□□□□□ -0.58
CCDC90B-212ENST00000529312 PIP4P2Q8N4L2 257 aa11.43□□□□□ -0.58
CCDC90B-212ENST00000529312 ORAI2Q96SN7 254 aa11.43□□□□□ -0.58
CCDC90B-212ENST00000529312 PHLPP1O60346 1717 aa11.43□□□□□ -0.58
CCDC90B-212ENST00000529312 LRPPRCP42704 1394 aaKnown RBP11.42□□□□□ -0.58
CCDC90B-212ENST00000529312 NRXN3Q9Y4C0 1643 aa11.42□□□□□ -0.58
CCDC90B-212ENST00000529312 C1orf167Q5SNV9 1468 aa11.41□□□□□ -0.58
CCDC90B-212ENST00000529312 RXRBP28702 533 aa11.41□□□□□ -0.58
CCDC90B-212ENST00000529312 CFAP70Q5T0N1 1121 aa11.41□□□□□ -0.58
CCDC90B-212ENST00000529312 DCAF11Q8TEB1 546 aa11.41□□□□□ -0.58
CCDC90B-212ENST00000529312 POGKQ9P215 609 aa11.41□□□□□ -0.58
CCDC90B-212ENST00000529312 KDM2AQ9Y2K7 1162 aa11.41□□□□□ -0.58
CCDC90B-212ENST00000529312 XRN1Q8IZH2 1706 aaKnown RBP11.4□□□□□ -0.58
CCDC90B-212ENST00000529312 SOS2Q07890 1332 aaPredicted RBP11.4□□□□□ -0.58
CCDC90B-212ENST00000529312 NPHP3Q7Z494 1330 aa11.4□□□□□ -0.58
CCDC90B-212ENST00000529312 AHDC1Q5TGY3 1603 aaPredicted RBP11.4□□□□□ -0.58
CCDC90B-212ENST00000529312 MYCNP04198 464 aaPredicted RBP11.4□□□□□ -0.58
CCDC90B-212ENST00000529312 NGLY1Q96IV0 654 aa11.4□□□□□ -0.58
CCDC90B-212ENST00000529312 PRAG1Q86YV5 1406 aa11.4□□□□□ -0.58
CCDC90B-212ENST00000529312 FOXO3O43524 673 aa11.39□□□□□ -0.59
CCDC90B-212ENST00000529312 PSME1Q06323 249 aa11.39□□□□□ -0.59
CCDC90B-212ENST00000529312 DDX17Q92841 729 aaKnown RBP11.39□□□□□ -0.59
CCDC90B-212ENST00000529312 REM2Q8IYK8 340 aaPredicted RBP11.38□□□□□ -0.59
CCDC90B-212ENST00000529312 QTRT2Q9H974 415 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-212ENST00000529312 YTHDC2Q9H6S0 1430 aaKnown RBP11.37□□□□□ -0.59
CCDC90B-212ENST00000529312 PPLO60437 1756 aa11.37□□□□□ -0.59
CCDC90B-212ENST00000529312 ASXL1Q8IXJ9 1541 aa11.37□□□□□ -0.59
CCDC90B-212ENST00000529312 TECPR2O15040 1411 aa11.36□□□□□ -0.59
CCDC90B-212ENST00000529312 PIK3C2GO75747 1445 aa11.36□□□□□ -0.59
CCDC90B-212ENST00000529312 COL16A1Q07092 1604 aaPredicted RBP11.36□□□□□ -0.59
CCDC90B-212ENST00000529312 NUTM2FA1L443 756 aa11.36□□□□□ -0.59
CCDC90B-212ENST00000529312 HAX1O00165 279 aa11.36□□□□□ -0.59
CCDC90B-212ENST00000529312 C8orf37Q96NL8 207 aa11.36□□□□□ -0.59
CCDC90B-212ENST00000529312 AFF2P51816 1311 aa11.35□□□□□ -0.59
CCDC90B-212ENST00000529312 ADAMTS2O95450 1211 aa11.35□□□□□ -0.59
CCDC90B-212ENST00000529312 RBM6P78332 1123 aaKnown RBP11.35□□□□□ -0.59
CCDC90B-212ENST00000529312 KRT28Q7Z3Y7 464 aa11.35□□□□□ -0.59
CCDC90B-212ENST00000529312 PRAM1Q96QH2 718 aa11.35□□□□□ -0.59
CCDC90B-212ENST00000529312 ZBTB12Q9Y330 459 aaPredicted RBP11.35□□□□□ -0.59
CCDC90B-212ENST00000529312 PNPLA6Q8IY17 1366 aa11.35□□□□□ -0.59
CCDC90B-212ENST00000529312 PHF8Q9UPP1 1060 aa11.34□□□□□ -0.59
CCDC90B-212ENST00000529312 TRAK1Q9UPV9 953 aa11.34□□□□□ -0.59
CCDC90B-212ENST00000529312 SAFB2Q14151 953 aaKnown RBP eCLIP11.33□□□□□ -0.6
CCDC90B-212ENST00000529312 USP21Q9UK80 565 aa11.33□□□□□ -0.6
CCDC90B-212ENST00000529312 TRPC5Q9UL62 973 aaPredicted RBP11.33□□□□□ -0.6
CCDC90B-212ENST00000529312 MYOM2P54296 1465 aa11.32□□□□□ -0.6
CCDC90B-212ENST00000529312 FXR2P51116 673 aaKnown RBP eCLIP11.32□□□□□ -0.6
CCDC90B-212ENST00000529312 FNBP4Q8N3X1 1017 aaPredicted RBP11.32□□□□□ -0.6
CCDC90B-212ENST00000529312 PLEKHH1Q9ULM0 1364 aa11.31□□□□□ -0.6
CCDC90B-212ENST00000529312 SHPRHQ149N8 1683 aa11.31□□□□□ -0.6
CCDC90B-212ENST00000529312 HAP1P54257 671 aaPredicted RBP11.31□□□□□ -0.6
CCDC90B-212ENST00000529312 NRXN1Q9ULB1 1477 aa11.31□□□□□ -0.6
CCDC90B-212ENST00000529312 SETD1AO15047 1707 aaKnown RBP11.3□□□□□ -0.6
CCDC90B-212ENST00000529312 XPCQ01831 940 aaPredicted RBP11.3□□□□□ -0.6
CCDC90B-212ENST00000529312 LRP6O75581 1613 aa11.3□□□□□ -0.6
CCDC90B-212ENST00000529312 SPATA31A3Q5VYP0 1347 aa11.3□□□□□ -0.6
CCDC90B-212ENST00000529312 EIF3AQ14152 1382 aaKnown RBP11.29□□□□□ -0.6
CCDC90B-212ENST00000529312 WASLO00401 505 aaPredicted RBP11.29□□□□□ -0.6
CCDC90B-212ENST00000529312 LMOD2Q6P5Q4 547 aa11.29□□□□□ -0.6
CCDC90B-212ENST00000529312 NALCNQ8IZF0 1738 aa11.29□□□□□ -0.6
CCDC90B-212ENST00000529312 NHSL1Q5SYE7 1610 aa11.28□□□□□ -0.6
CCDC90B-212ENST00000529312 MINK1Q8N4C8 1332 aaPredicted RBP11.28□□□□□ -0.6
CCDC90B-212ENST00000529312 CDC42BPGQ6DT37 1551 aa11.28□□□□□ -0.6
CCDC90B-212ENST00000529312 GPRASP1Q5JY77 1395 aa11.28□□□□□ -0.6
CCDC90B-212ENST00000529312 NGDNQ8NEJ9 315 aaKnown RBP11.27□□□□□ -0.61
CCDC90B-212ENST00000529312 PMFBP1Q8TBY8 1022 aa11.27□□□□□ -0.61
CCDC90B-212ENST00000529312 UPF1Q92900 1129 aaKnown RBP eCLIP11.27□□□□□ -0.61
CCDC90B-212ENST00000529312 CDK12Q9NYV4 1490 aaPredicted RBP11.26□□□□□ -0.61
CCDC90B-212ENST00000529312 HIRIP3Q9BW71 556 aaPredicted RBP11.26□□□□□ -0.61
CCDC90B-212ENST00000529312 SBNO1A3KN83 1393 aa11.26□□□□□ -0.61
CCDC90B-212ENST00000529312 IFT172Q9UG01 1749 aa11.26□□□□□ -0.61
CCDC90B-212ENST00000529312 DLC1Q96QB1 1528 aa11.25□□□□□ -0.61
CCDC90B-212ENST00000529312 LAMC1P11047 1609 aa11.25□□□□□ -0.61
CCDC90B-212ENST00000529312 UNC5CLQ8IV45 518 aa11.25□□□□□ -0.61
CCDC90B-212ENST00000529312 ARHGEF10O15013 1369 aa11.25□□□□□ -0.61
CCDC90B-212ENST00000529312 ANKARQ7Z5J8 1434 aa11.25□□□□□ -0.61
CCDC90B-212ENST00000529312 NUDT16Q96DE0 195 aaKnown RBP11.24□□□□□ -0.61
CCDC90B-212ENST00000529312 GJD4Q96KN9 370 aaPredicted RBP11.24□□□□□ -0.61
CCDC90B-212ENST00000529312 CDK19Q9BWU1 502 aa11.24□□□□□ -0.61
CCDC90B-212ENST00000529312 CCDC61Q9Y6R9 512 aa11.24□□□□□ -0.61
CCDC90B-212ENST00000529312 PITPNM1O00562 1244 aa11.23□□□□□ -0.61
CCDC90B-212ENST00000529312 CCDC125Q86Z20 511 aa11.23□□□□□ -0.61
CCDC90B-212ENST00000529312 PXDNQ92626 1479 aa11.23□□□□□ -0.61
CCDC90B-212ENST00000529312 KNDC1Q76NI1 1749 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms