RNA–Protein interactions for RNA: ENST00000529098.5

PDZD3-210, Transcript of PDZ domain containing 3, humanhuman

TSL 2

Gene PDZD3, Length 2,532 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-210ENST00000529098 CCDC141Q6ZP82 1450 aa22.67■■□□□ 1.22
PDZD3-210ENST00000529098 MAGI2Q86UL8 1455 aa22.67■■□□□ 1.22
PDZD3-210ENST00000529098 RWDD1Q9H446 243 aaPredicted RBP22.66■■□□□ 1.22
PDZD3-210ENST00000529098 CIZ1Q9ULV3 898 aaPredicted RBP22.66■■□□□ 1.22
PDZD3-210ENST00000529098 PCDHB15Q9Y5E8 787 aa22.66■■□□□ 1.22
PDZD3-210ENST00000529098 WDR7Q9Y4E6 1490 aa22.65■■□□□ 1.22
PDZD3-210ENST00000529098 MSNP26038 577 aaKnown RBP22.64■■□□□ 1.21
PDZD3-210ENST00000529098 TNPO1Q92973 898 aaKnown RBP22.64■■□□□ 1.21
PDZD3-210ENST00000529098 ANP32BQ92688 251 aaKnown RBP22.63■■□□□ 1.21
PDZD3-210ENST00000529098 SMAP1Q8IYB5 467 aaPredicted RBP22.62■■□□□ 1.21
PDZD3-210ENST00000529098 MFAP1P55081 439 aaKnown RBP22.62■■□□□ 1.21
PDZD3-210ENST00000529098 EIF2AK4Q9P2K8 1649 aaKnown RBP22.61■■□□□ 1.21
PDZD3-210ENST00000529098 NASPP49321 788 aaPredicted RBP22.61■■□□□ 1.21
PDZD3-210ENST00000529098 MTERF4Q7Z6M4 381 aaKnown RBP22.61■■□□□ 1.21
PDZD3-210ENST00000529098 SMC5Q8IY18 1101 aa22.6■■□□□ 1.21
PDZD3-210ENST00000529098 SNX21Q969T3 373 aa22.6■■□□□ 1.21
PDZD3-210ENST00000529098 DMRT2Q9Y5R5 561 aa22.6■■□□□ 1.21
PDZD3-210ENST00000529098 A2MP01023 1474 aa22.6■■□□□ 1.21
PDZD3-210ENST00000529098 PLCH2O75038 1416 aa22.59■■□□□ 1.21
PDZD3-210ENST00000529098 RAB3GAP1Q15042 981 aa22.59■■□□□ 1.21
PDZD3-210ENST00000529098 NPC1L1Q9UHC9 1359 aa22.59■■□□□ 1.21
PDZD3-210ENST00000529098 HS1BP3Q53T59 392 aa22.59■■□□□ 1.21
PDZD3-210ENST00000529098 FAM13BQ9NYF5 915 aa22.59■■□□□ 1.21
PDZD3-210ENST00000529098 ASXL1Q8IXJ9 1541 aa22.59■■□□□ 1.21
PDZD3-210ENST00000529098 IBTKQ9P2D0 1353 aaPredicted RBP22.57■■□□□ 1.2
PDZD3-210ENST00000529098 RGL3Q3MIN7 710 aa22.57■■□□□ 1.2
PDZD3-210ENST00000529098 FAM135AQ9P2D6 1515 aa22.55■■□□□ 1.2
PDZD3-210ENST00000529098 RARSP54136 660 aaKnown RBP22.55■■□□□ 1.2
PDZD3-210ENST00000529098 RSPH4AQ5TD94 716 aa22.55■■□□□ 1.2
PDZD3-210ENST00000529098 EFCAB2Q5VUJ9 269 aa22.55■■□□□ 1.2
PDZD3-210ENST00000529098 R3HCC1Q9Y3T6 440 aaKnown RBP22.55■■□□□ 1.2
PDZD3-210ENST00000529098 SYNMO15061 1565 aa22.54■■□□□ 1.2
PDZD3-210ENST00000529098 ZNF500O60304 480 aaPredicted RBP22.53■■□□□ 1.2
PDZD3-210ENST00000529098 RLBP1P12271 317 aa22.53■■□□□ 1.2
PDZD3-210ENST00000529098 RBM25P49756 843 aaKnown RBP22.53■■□□□ 1.2
PDZD3-210ENST00000529098 WWC1Q8IX03 1113 aa22.53■■□□□ 1.2
PDZD3-210ENST00000529098 CDCA8Q53HL2 280 aa22.52■■□□□ 1.2
PDZD3-210ENST00000529098 TRAPPC8Q9Y2L5 1435 aa22.51■■□□□ 1.19
PDZD3-210ENST00000529098 A0A0U1RQG5 324 aaPredicted RBP22.51■■□□□ 1.19
PDZD3-210ENST00000529098 NOL7Q9UMY1 257 aaKnown RBP22.51■■□□□ 1.19
PDZD3-210ENST00000529098 DYNC1I1O14576 645 aa22.5■■□□□ 1.19
PDZD3-210ENST00000529098 UQCRHLA0A096LP55 91 aa22.5■■□□□ 1.19
PDZD3-210ENST00000529098 UQCRHP07919 91 aa22.5■■□□□ 1.19
PDZD3-210ENST00000529098 HSP90AB1P08238 724 aaKnown RBP22.5■■□□□ 1.19
PDZD3-210ENST00000529098 ASXL2Q76L83 1435 aa22.49■■□□□ 1.19
PDZD3-210ENST00000529098 ABCC1P33527 1531 aa22.49■■□□□ 1.19
PDZD3-210ENST00000529098 MAST1Q9Y2H9 1570 aa22.49■■□□□ 1.19
PDZD3-210ENST00000529098 GOLGA6L22H0YM25 854 aa22.49■■□□□ 1.19
PDZD3-210ENST00000529098 KLHL40Q2TBA0 621 aa22.48■■□□□ 1.19
PDZD3-210ENST00000529098 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.48■■□□□ 1.19
PDZD3-210ENST00000529098 RNF17Q9BXT8 1623 aaKnown RBP22.48■■□□□ 1.19
PDZD3-210ENST00000529098 AFAP1Q8N556 730 aa22.48■■□□□ 1.19
PDZD3-210ENST00000529098 PLA2R1Q13018 1463 aa22.47■■□□□ 1.19
PDZD3-210ENST00000529098 CSPP1Q1MSJ5 1256 aa22.47■■□□□ 1.19
PDZD3-210ENST00000529098 CLEC17AQ6ZS10 378 aa22.47■■□□□ 1.19
PDZD3-210ENST00000529098 UTP14CQ5TAP6 766 aaKnown RBP22.46■■□□□ 1.19
PDZD3-210ENST00000529098 TNNQ9UQP3 1299 aa22.46■■□□□ 1.19
PDZD3-210ENST00000529098 MVPQ14764 893 aaKnown RBP22.45■■□□□ 1.18
PDZD3-210ENST00000529098 ZNF445P59923 1031 aa22.44■■□□□ 1.18
PDZD3-210ENST00000529098 MCM5P33992 734 aa22.43■■□□□ 1.18
PDZD3-210ENST00000529098 FGD1P98174 961 aa22.43■■□□□ 1.18
PDZD3-210ENST00000529098 PDLIM2Q96JY6 352 aa22.42■■□□□ 1.18
PDZD3-210ENST00000529098 HDAC1Q13547 482 aaPredicted RBP22.42■■□□□ 1.18
PDZD3-210ENST00000529098 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.42■■□□□ 1.18
PDZD3-210ENST00000529098 DDX49Q9Y6V7 483 aaKnown RBP22.42■■□□□ 1.18
PDZD3-210ENST00000529098 ARHGAP31Q2M1Z3 1444 aa22.42■■□□□ 1.18
PDZD3-210ENST00000529098 FANCAO15360 1455 aa22.41■■□□□ 1.18
PDZD3-210ENST00000529098 XPCQ01831 940 aaPredicted RBP22.4■■□□□ 1.18
PDZD3-210ENST00000529098 ABCA9Q8IUA7 1624 aa22.4■■□□□ 1.18
PDZD3-210ENST00000529098 DMTNQ08495 405 aa22.4■■□□□ 1.18
PDZD3-210ENST00000529098 NPM1P06748 294 aaKnown RBP eCLIP22.39■■□□□ 1.18
PDZD3-210ENST00000529098 SASS6Q6UVJ0 657 aa22.39■■□□□ 1.17
PDZD3-210ENST00000529098 ZKSCAN5Q9Y2L8 839 aa22.39■■□□□ 1.17
PDZD3-210ENST00000529098 WDR63Q8IWG1 891 aa22.38■■□□□ 1.17
PDZD3-210ENST00000529098 CCDC94Q9BW85 323 aaPredicted RBP22.38■■□□□ 1.17
PDZD3-210ENST00000529098 SPAG9O60271 1321 aaKnown RBP22.38■■□□□ 1.17
PDZD3-210ENST00000529098 IQGAP1P46940 1657 aa22.37■■□□□ 1.17
PDZD3-210ENST00000529098 SSFA2P28290 1259 aa22.37■■□□□ 1.17
PDZD3-210ENST00000529098 BCL2L13Q9BXK5 485 aa22.37■■□□□ 1.17
PDZD3-210ENST00000529098 ARAP3Q8WWN8 1544 aa22.37■■□□□ 1.17
PDZD3-210ENST00000529098 DUOX2Q9NRD8 1548 aa22.37■■□□□ 1.17
PDZD3-210ENST00000529098 K7ELQ4 463 aaPredicted RBP22.36■■□□□ 1.17
PDZD3-210ENST00000529098 BAG4O95429 457 aaKnown RBP22.36■■□□□ 1.17
PDZD3-210ENST00000529098 POLR3AO14802 1390 aaPredicted RBP22.36■■□□□ 1.17
PDZD3-210ENST00000529098 PHF23Q9BUL5 403 aaPredicted RBP22.36■■□□□ 1.17
PDZD3-210ENST00000529098 MYOM1P52179 1685 aa22.36■■□□□ 1.17
PDZD3-210ENST00000529098 KANK1Q14678 1352 aa22.36■■□□□ 1.17
PDZD3-210ENST00000529098 UNC13BO14795 1591 aa22.36■■□□□ 1.17
PDZD3-210ENST00000529098 ZKSCAN2Q63HK3 967 aa22.35■■□□□ 1.17
PDZD3-210ENST00000529098 ZHX1Q9UKY1 873 aaPredicted RBP22.35■■□□□ 1.17
PDZD3-210ENST00000529098 DZIP1LQ8IYY4 767 aaKnown RBP22.35■■□□□ 1.17
PDZD3-210ENST00000529098 FTSJ3Q8IY81 847 aaKnown RBP22.34■■□□□ 1.17
PDZD3-210ENST00000529098 KIF2CQ99661 725 aa22.34■■□□□ 1.17
PDZD3-210ENST00000529098 NCLP19338 710 aaKnown RBP22.33■■□□□ 1.17
PDZD3-210ENST00000529098 ZSCAN23Q3MJ62 389 aa22.33■■□□□ 1.17
PDZD3-210ENST00000529098 RUNDC1Q96C34 613 aa22.33■■□□□ 1.17
PDZD3-210ENST00000529098 PRDM10Q9NQV6 1147 aa22.33■■□□□ 1.17
PDZD3-210ENST00000529098 ATP10AO60312 1499 aa22.33■■□□□ 1.16
PDZD3-210ENST00000529098 ZFYVE16Q7Z3T8 1539 aa22.32■■□□□ 1.16
PDZD3-210ENST00000529098 RBSNQ9H1K0 784 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms