RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-215ENST00000529063 CADPS2Q86UW7 1296 aa9.29□□□□□ -0.92
NUP98-215ENST00000529063 AMOTL2Q9Y2J4 779 aa9.29□□□□□ -0.92
NUP98-215ENST00000529063 LAMC1P11047 1609 aa9.29□□□□□ -0.92
NUP98-215ENST00000529063 SETD5Q9C0A6 1442 aa9.29□□□□□ -0.92
NUP98-215ENST00000529063 METP08581 1390 aa9.28□□□□□ -0.92
NUP98-215ENST00000529063 C14orf37Q86TY3 774 aa9.28□□□□□ -0.92
NUP98-215ENST00000529063 ADGRL3Q9HAR2 1447 aa9.28□□□□□ -0.92
NUP98-215ENST00000529063 CDK12Q9NYV4 1490 aaPredicted RBP9.28□□□□□ -0.92
NUP98-215ENST00000529063 ATF3P18847 181 aa9.27□□□□□ -0.93
NUP98-215ENST00000529063 C1QBPQ07021 282 aaKnown RBP9.27□□□□□ -0.93
NUP98-215ENST00000529063 UPF1Q92900 1129 aaKnown RBP eCLIP9.27□□□□□ -0.93
NUP98-215ENST00000529063 KIF1BO60333 1816 aa9.26□□□□□ -0.93
NUP98-215ENST00000529063 RGS12O14924 1447 aa9.26□□□□□ -0.93
NUP98-215ENST00000529063 TRIM52Q96A61 297 aa9.26□□□□□ -0.93
NUP98-215ENST00000529063 PNPLA6Q8IY17 1366 aa9.25□□□□□ -0.93
NUP98-215ENST00000529063 PRKCSHP14314 528 aaPredicted RBP9.25□□□□□ -0.93
NUP98-215ENST00000529063 MEX3CQ5U5Q3 659 aaKnown RBP9.25□□□□□ -0.93
NUP98-215ENST00000529063 ZNF772Q68DY9 489 aaPredicted RBP9.25□□□□□ -0.93
NUP98-215ENST00000529063 PAXIP1Q6ZW49 1069 aaPredicted RBP9.25□□□□□ -0.93
NUP98-215ENST00000529063 ZNF692Q9BU19 519 aaPredicted RBP9.25□□□□□ -0.93
NUP98-215ENST00000529063 TAOK2Q9UL54 1235 aa9.25□□□□□ -0.93
NUP98-215ENST00000529063 PRAG1Q86YV5 1406 aa9.24□□□□□ -0.93
NUP98-215ENST00000529063 PLCD3Q8N3E9 789 aa9.24□□□□□ -0.93
NUP98-215ENST00000529063 DDX17Q92841 729 aaKnown RBP9.24□□□□□ -0.93
NUP98-215ENST00000529063 AFF2P51816 1311 aa9.24□□□□□ -0.93
NUP98-215ENST00000529063 PPLO60437 1756 aa9.24□□□□□ -0.93
NUP98-215ENST00000529063 PTCH1Q13635 1447 aa9.23□□□□□ -0.93
NUP98-215ENST00000529063 C1orf167Q5SNV9 1468 aa9.23□□□□□ -0.93
NUP98-215ENST00000529063 NUTM2BA6NNL0 878 aaPredicted RBP9.23□□□□□ -0.93
NUP98-215ENST00000529063 NUTM2EB1AL46 878 aaPredicted RBP9.23□□□□□ -0.93
NUP98-215ENST00000529063 NUTM2AQ8IVF1 878 aaPredicted RBP9.23□□□□□ -0.93
NUP98-215ENST00000529063 CFAP44Q96MT7 982 aa9.23□□□□□ -0.93
NUP98-215ENST00000529063 COL22A1Q8NFW1 1626 aaPredicted RBP9.23□□□□□ -0.93
NUP98-215ENST00000529063 RXRBP28702 533 aa9.22□□□□□ -0.93
NUP98-215ENST00000529063 ITGAEP38570 1179 aa9.22□□□□□ -0.93
NUP98-215ENST00000529063 NAIPQ13075 1403 aa9.22□□□□□ -0.93
NUP98-215ENST00000529063 ROBO2Q9HCK4 1378 aa9.21□□□□□ -0.94
NUP98-215ENST00000529063 MARF1Q9Y4F3 1742 aaKnown RBP9.2□□□□□ -0.94
NUP98-215ENST00000529063 ZNF326Q5BKZ1 582 aaKnown RBP9.2□□□□□ -0.94
NUP98-215ENST00000529063 KDM2AQ9Y2K7 1162 aa9.2□□□□□ -0.94
NUP98-215ENST00000529063 RRBP1Q9P2E9 1410 aaKnown RBP9.2□□□□□ -0.94
NUP98-215ENST00000529063 CDC42BPGQ6DT37 1551 aa9.2□□□□□ -0.94
NUP98-215ENST00000529063 EP400Q96L91 3159 aa9.2□□□□□ -0.94
NUP98-215ENST00000529063 IFT172Q9UG01 1749 aa9.19□□□□□ -0.94
NUP98-215ENST00000529063 PPARGC1BQ86YN6 1023 aaKnown RBP9.19□□□□□ -0.94
NUP98-215ENST00000529063 LRRC59Q96AG4 307 aaKnown RBP9.19□□□□□ -0.94
NUP98-215ENST00000529063 C8orf37Q96NL8 207 aa9.19□□□□□ -0.94
NUP98-215ENST00000529063 RGL2O15211 777 aa9.18□□□□□ -0.94
NUP98-215ENST00000529063 MYOM2P54296 1465 aa9.18□□□□□ -0.94
NUP98-215ENST00000529063 SOS2Q07890 1332 aaPredicted RBP9.18□□□□□ -0.94
NUP98-215ENST00000529063 SRCAPQ6ZRS2 3230 aa9.18□□□□□ -0.94
NUP98-215ENST00000529063 MIER1Q8N108 512 aa9.18□□□□□ -0.94
NUP98-215ENST00000529063 PXDNQ92626 1479 aa9.17□□□□□ -0.94
NUP98-215ENST00000529063 SPDYE2BA6NHP3 402 aa9.17□□□□□ -0.94
NUP98-215ENST00000529063 SPDYE6P0CI01 402 aa9.17□□□□□ -0.94
NUP98-215ENST00000529063 SPDYE2Q495Y8 402 aa9.17□□□□□ -0.94
NUP98-215ENST00000529063 ORAI2Q96SN7 254 aa9.17□□□□□ -0.94
NUP98-215ENST00000529063 KNDC1Q76NI1 1749 aa9.17□□□□□ -0.94
NUP98-215ENST00000529063 ATRNO75882 1429 aa9.16□□□□□ -0.94
NUP98-215ENST00000529063 RBM6P78332 1123 aaKnown RBP9.16□□□□□ -0.94
NUP98-215ENST00000529063 QTRT2Q9H974 415 aaKnown RBP9.16□□□□□ -0.94
NUP98-215ENST00000529063 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.16□□□□□ -0.94
NUP98-215ENST00000529063 HFM1A2PYH4 1435 aa9.15□□□□□ -0.94
NUP98-215ENST00000529063 FMN2Q9NZ56 1722 aa9.15□□□□□ -0.94
NUP98-215ENST00000529063 ADAMTS2O95450 1211 aa9.15□□□□□ -0.94
NUP98-215ENST00000529063 SPRYD3Q8NCJ5 442 aa9.15□□□□□ -0.94
NUP98-215ENST00000529063 SSUH2Q9Y2M2 353 aa9.15□□□□□ -0.94
NUP98-215ENST00000529063 BCL9LQ86UU0 1499 aa9.14□□□□□ -0.95
NUP98-215ENST00000529063 TECPR2O15040 1411 aa9.14□□□□□ -0.95
NUP98-215ENST00000529063 GLI3P10071 1580 aa9.13□□□□□ -0.95
NUP98-215ENST00000529063 FNBP4Q8N3X1 1017 aaPredicted RBP9.13□□□□□ -0.95
NUP98-215ENST00000529063 NGLY1Q96IV0 654 aa9.13□□□□□ -0.95
NUP98-215ENST00000529063 ABCA3Q99758 1704 aa9.13□□□□□ -0.95
NUP98-215ENST00000529063 ATAD2Q6PL18 1390 aa9.12□□□□□ -0.95
NUP98-215ENST00000529063 TPRNQ4KMQ1 711 aa9.12□□□□□ -0.95
NUP98-215ENST00000529063 USP21Q9UK80 565 aa9.12□□□□□ -0.95
NUP98-215ENST00000529063 CIZ1Q9ULV3 898 aaPredicted RBP9.12□□□□□ -0.95
NUP98-215ENST00000529063 SPATA31E1Q6ZUB1 1445 aa9.12□□□□□ -0.95
NUP98-215ENST00000529063 BRWD3Q6RI45 1802 aa9.12□□□□□ -0.95
NUP98-215ENST00000529063 RGPD8O14715 1765 aaPredicted RBP9.12□□□□□ -0.95
NUP98-215ENST00000529063 RPGRIP1LQ68CZ1 1315 aa9.11□□□□□ -0.95
NUP98-215ENST00000529063 KIF1AQ12756 1690 aa9.11□□□□□ -0.95
NUP98-215ENST00000529063 VGFO15240 615 aaPredicted RBP9.11□□□□□ -0.95
NUP98-215ENST00000529063 DSG3P32926 999 aa9.11□□□□□ -0.95
NUP98-215ENST00000529063 USP32Q8NFA0 1604 aa9.11□□□□□ -0.95
NUP98-215ENST00000529063 PLEKHH1Q9ULM0 1364 aa9.11□□□□□ -0.95
NUP98-215ENST00000529063 PLCH1Q4KWH8 1693 aa9.1□□□□□ -0.95
NUP98-215ENST00000529063 ADGRF5Q8IZF2 1346 aa9.1□□□□□ -0.95
NUP98-215ENST00000529063 TRPC5Q9UL62 973 aaPredicted RBP9.1□□□□□ -0.95
NUP98-215ENST00000529063 PIK3C2GO75747 1445 aa9.1□□□□□ -0.95
NUP98-215ENST00000529063 SLIT2O94813 1529 aa9.1□□□□□ -0.95
NUP98-215ENST00000529063 NPHP3Q7Z494 1330 aa9.09□□□□□ -0.95
NUP98-215ENST00000529063 PLEKHG5O94827 1062 aa9.09□□□□□ -0.95
NUP98-215ENST00000529063 XPCQ01831 940 aaPredicted RBP9.09□□□□□ -0.95
NUP98-215ENST00000529063 TSHZ2Q9NRE2 1034 aa9.09□□□□□ -0.95
NUP98-215ENST00000529063 LRPPRCP42704 1394 aaKnown RBP9.09□□□□□ -0.95
NUP98-215ENST00000529063 ZBTB47Q9UFB7 747 aaPredicted RBP9.08□□□□□ -0.96
NUP98-215ENST00000529063 RALGAPBQ86X10 1494 aa9.08□□□□□ -0.96
NUP98-215ENST00000529063 ESCO1Q5FWF5 840 aa9.07□□□□□ -0.96
NUP98-215ENST00000529063 WAPLQ7Z5K2 1190 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms