RNA–Protein interactions for RNA: ENST00000528883.5

PPFIBP2-208, Transcript of PPFIA binding protein 2, human

APPRIS ALT2 TSL 2 BASIC

Gene PPFIBP2, Length 2,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIBP2-208	ENST00000528883	SCAF11	Q99590	1463 aa	Known RBP	13.76	□□□□□ -0.21
PPFIBP2-208	ENST00000528883	TNPO1	Q92973	898 aa	Known RBP	13.76	□□□□□ -0.21
PPFIBP2-208	ENST00000528883	PDCL3	Q9H2J4	239 aa		13.76	□□□□□ -0.21
PPFIBP2-208	ENST00000528883	CARMIL2	Q6F5E8	1435 aa		13.75	□□□□□ -0.21
PPFIBP2-208	ENST00000528883	NCOA3	Q9Y6Q9	1424 aa		13.75	□□□□□ -0.21
PPFIBP2-208	ENST00000528883	DDIT3	P35638	169 aa		13.75	□□□□□ -0.21
PPFIBP2-208	ENST00000528883	KIAA1211	Q6ZU35	1233 aa		13.75	□□□□□ -0.21
PPFIBP2-208	ENST00000528883	ATP10A	O60312	1499 aa		13.74	□□□□□ -0.21
PPFIBP2-208	ENST00000528883	MVP	Q14764	893 aa	Known RBP	13.73	□□□□□ -0.21
PPFIBP2-208	ENST00000528883	GBP4	Q96PP9	640 aa		13.73	□□□□□ -0.21
PPFIBP2-208	ENST00000528883	RSPH4A	Q5TD94	716 aa		13.73	□□□□□ -0.21
PPFIBP2-208	ENST00000528883	KDM5A	P29375	1690 aa	Known RBP	13.72	□□□□□ -0.21
PPFIBP2-208	ENST00000528883	CARD14	Q9BXL6	1004 aa		13.72	□□□□□ -0.21
PPFIBP2-208	ENST00000528883	SYCP2	Q9BX26	1530 aa		13.72	□□□□□ -0.21
PPFIBP2-208	ENST00000528883	SCAPER	Q9BY12	1400 aa		13.71	□□□□□ -0.21
PPFIBP2-208	ENST00000528883	HSP90AB1	P08238	724 aa	Known RBP	13.71	□□□□□ -0.21
PPFIBP2-208	ENST00000528883	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.71	□□□□□ -0.21
PPFIBP2-208	ENST00000528883	TCP11L2	Q8N4U5	519 aa		13.71	□□□□□ -0.21
PPFIBP2-208	ENST00000528883	POLR3A	O14802	1390 aa	Predicted RBP	13.71	□□□□□ -0.21
PPFIBP2-208	ENST00000528883	CDC42BPB	Q9Y5S2	1711 aa		13.71	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	CCDC173	Q0VFZ6	552 aa		13.71	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	FTSJ3	Q8IY81	847 aa	Known RBP	13.71	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	RUNDC1	Q96C34	613 aa		13.71	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	SMC5	Q8IY18	1101 aa		13.7	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	RAB3GAP1	Q15042	981 aa		13.7	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.7	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	CEP152	O94986	1710 aa		13.69	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	PREX2	Q70Z35	1606 aa		13.69	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	ZSCAN30	Q86W11	494 aa		13.69	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	WDR63	Q8IWG1	891 aa		13.69	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	SNX21	Q969T3	373 aa		13.69	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	MAST1	Q9Y2H9	1570 aa		13.69	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	NASP	P49321	788 aa	Predicted RBP	13.69	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	ZKSCAN2	Q63HK3	967 aa		13.69	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	DZIP1L	Q8IYY4	767 aa	Known RBP	13.69	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	IQSEC2	Q5JU85	1478 aa		13.68	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	TNNT2	P45379	298 aa	Predicted RBP	13.68	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	RBM25	P49756	843 aa	Known RBP	13.68	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	PPP1R9B	Q96SB3	815 aa		13.68	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	FOXD4L1	Q9NU39	408 aa		13.68	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	OFD1	O75665	1012 aa		13.68	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	PTMS	P20962	102 aa		13.68	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	RBM10	P98175	930 aa	Known RBP	13.68	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	PHF23	Q9BUL5	403 aa	Predicted RBP	13.68	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	DNAJC5	Q9H3Z4	198 aa		13.67	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	SHPRH	Q149N8	1683 aa		13.67	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	TTC37	Q6PGP7	1564 aa		13.67	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	MSN	P26038	577 aa	Known RBP	13.67	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	HDAC1	Q13547	482 aa	Predicted RBP	13.67	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	ANP32B	Q92688	251 aa	Known RBP	13.67	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	DUOX2	Q9NRD8	1548 aa		13.67	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	CALD1	Q05682	793 aa	Known RBP	13.66	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	SPHKAP	Q2M3C7	1700 aa		13.66	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	ERVK-7	P63135	1459 aa		13.66	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	RIPK4	P57078	832 aa		13.66	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.66	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	RIMBP3C	A6NJZ7	1639 aa		13.66	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	RIMBP3B	A6NNM3	1639 aa		13.66	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	RIMBP3	Q9UFD9	1639 aa		13.66	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	CYB5RL	Q6IPT4	315 aa		13.65	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	MORC1	Q86VD1	984 aa		13.65	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	ITPRIP	Q8IWB1	547 aa		13.65	□□□□□ -0.22
PPFIBP2-208	ENST00000528883	ARHGAP5	Q13017	1502 aa		13.64	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	SSFA2	P28290	1259 aa		13.63	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	SMC4	Q9NTJ3	1288 aa		13.63	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	KANK1	Q14678	1352 aa		13.63	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	CD2BP2	O95400	341 aa	Known RBP	13.63	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	TRIM27	P14373	513 aa		13.63	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	CCDC27	Q2M243	656 aa		13.63	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	GOLGA6L22	H0YM25	854 aa		13.62	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	FAM13B	Q9NYF5	915 aa		13.62	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	DDX19B	Q9UMR2	479 aa		13.62	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.62	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	DDX49	Q9Y6V7	483 aa	Known RBP	13.62	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	TSR2	Q969E8	191 aa	Known RBP	13.62	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	TERF1	P54274	439 aa		13.61	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	KIF2C	Q99661	725 aa		13.61	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	LNPK	Q9C0E8	428 aa		13.61	□□□□□ -0.23
PPFIBP2-208	ENST00000528883		K7ELQ4	463 aa	Predicted RBP	13.61	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	KLHL40	Q2TBA0	621 aa		13.61	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	PRDM4	Q9UKN5	801 aa		13.61	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	NSD3	Q9BZ95	1437 aa		13.61	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	STAC3	Q96MF2	364 aa		13.6	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.6	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	CFAP70	Q5T0N1	1121 aa		13.6	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	TRPM2	O94759	1503 aa		13.59	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	NUCB1	Q02818	461 aa		13.59	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	GAS2L2	Q8NHY3	880 aa		13.59	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	RBM42	Q9BTD8	480 aa	Known RBP	13.59	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	SLC24A1	O60721	1099 aa		13.59	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	BAG4	O95429	457 aa	Known RBP	13.59	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	EXOSC9	Q06265	439 aa	Known RBP	13.59	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	ATF7IP	Q6VMQ6	1270 aa		13.59	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	MAP7D2	Q96T17	732 aa		13.59	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	CLTCL1	P53675	1640 aa		13.59	□□□□□ -0.23
PPFIBP2-208	ENST00000528883	MTHFS	P49914	203 aa		13.58	□□□□□ -0.24
PPFIBP2-208	ENST00000528883	TMEM57	Q8N5G2	664 aa		13.58	□□□□□ -0.24
PPFIBP2-208	ENST00000528883	SSH1	Q8WYL5	1049 aa		13.58	□□□□□ -0.24
PPFIBP2-208	ENST00000528883	CHD1L	Q86WJ1	897 aa		13.57	□□□□□ -0.24
PPFIBP2-208	ENST00000528883	CFAP53	Q96M91	514 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms