RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 FAM135BQ49AJ0 1406 aa17.12■□□□□ 0.33
TRAF3IP2-211ENST00000528599 CENPJQ9HC77 1338 aaPredicted RBP17.11■□□□□ 0.33
TRAF3IP2-211ENST00000528599 SAFB2Q14151 953 aaKnown RBP eCLIP17.1■□□□□ 0.33
TRAF3IP2-211ENST00000528599 POGKQ9P215 609 aa17.1■□□□□ 0.33
TRAF3IP2-211ENST00000528599 UBAP1LF5GYI3 381 aa17.09■□□□□ 0.33
TRAF3IP2-211ENST00000528599 TESK2Q96S53 571 aa17.09■□□□□ 0.33
TRAF3IP2-211ENST00000528599 QRICH2Q9H0J4 1663 aa17.08■□□□□ 0.32
TRAF3IP2-211ENST00000528599 NALCNQ8IZF0 1738 aa17.07■□□□□ 0.32
TRAF3IP2-211ENST00000528599 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.06■□□□□ 0.32
TRAF3IP2-211ENST00000528599 SBNO2Q9Y2G9 1366 aa17.05■□□□□ 0.32
TRAF3IP2-211ENST00000528599 MINK1Q8N4C8 1332 aaPredicted RBP17.05■□□□□ 0.32
TRAF3IP2-211ENST00000528599 NCOA3Q9Y6Q9 1424 aa17.05■□□□□ 0.32
TRAF3IP2-211ENST00000528599 MSH6P52701 1360 aa17.03■□□□□ 0.32
TRAF3IP2-211ENST00000528599 C11orf95C9JLR9 678 aaPredicted RBP17.02■□□□□ 0.32
TRAF3IP2-211ENST00000528599 TOM1O60784 492 aa17.02■□□□□ 0.32
TRAF3IP2-211ENST00000528599 PIP4K2BP78356 416 aa17.02■□□□□ 0.32
TRAF3IP2-211ENST00000528599 ADGRL3Q9HAR2 1447 aa17.01■□□□□ 0.31
TRAF3IP2-211ENST00000528599 DISP3Q9P2K9 1392 aa17.01■□□□□ 0.31
TRAF3IP2-211ENST00000528599 TULP4Q9NRJ4 1543 aa17■□□□□ 0.31
TRAF3IP2-211ENST00000528599 C14orf37Q86TY3 774 aa17■□□□□ 0.31
TRAF3IP2-211ENST00000528599 C19orf44Q9H6X5 657 aa17■□□□□ 0.31
TRAF3IP2-211ENST00000528599 ZNF316A6NFI3 1004 aaPredicted RBP16.99■□□□□ 0.31
TRAF3IP2-211ENST00000528599 TMF1P82094 1093 aa16.99■□□□□ 0.31
TRAF3IP2-211ENST00000528599 ADGRB2O60241 1585 aa16.99■□□□□ 0.31
TRAF3IP2-211ENST00000528599 SCAF1Q9H7N4 1312 aaKnown RBP16.99■□□□□ 0.31
TRAF3IP2-211ENST00000528599 ROBO1Q9Y6N7 1651 aa16.98■□□□□ 0.31
TRAF3IP2-211ENST00000528599 WASLO00401 505 aaPredicted RBP16.97■□□□□ 0.31
TRAF3IP2-211ENST00000528599 SLC24A1O60721 1099 aa16.97■□□□□ 0.31
TRAF3IP2-211ENST00000528599 DCCP43146 1447 aa16.97■□□□□ 0.31
TRAF3IP2-211ENST00000528599 EVC2Q86UK5 1308 aa16.97■□□□□ 0.31
TRAF3IP2-211ENST00000528599 CDK19Q9BWU1 502 aa16.97■□□□□ 0.31
TRAF3IP2-211ENST00000528599 KIF7Q2M1P5 1343 aa16.96■□□□□ 0.31
TRAF3IP2-211ENST00000528599 MST1RQ04912 1400 aa16.95■□□□□ 0.3
TRAF3IP2-211ENST00000528599 CABP2Q9NPB3 220 aa16.95■□□□□ 0.3
TRAF3IP2-211ENST00000528599 SLAIN2Q9P270 581 aa16.95■□□□□ 0.3
TRAF3IP2-211ENST00000528599 WASHC2AQ641Q2 1341 aa16.95■□□□□ 0.3
TRAF3IP2-211ENST00000528599 CCDC7Q96M83 1385 aa16.94■□□□□ 0.3
TRAF3IP2-211ENST00000528599 CDC42BPGQ6DT37 1551 aa16.94■□□□□ 0.3
TRAF3IP2-211ENST00000528599 SRPK2P78362 688 aaKnown RBP16.94■□□□□ 0.3
TRAF3IP2-211ENST00000528599 CADPS2Q86UW7 1296 aa16.94■□□□□ 0.3
TRAF3IP2-211ENST00000528599 ATF3P18847 181 aa16.93■□□□□ 0.3
TRAF3IP2-211ENST00000528599 HSPA1LP34931 641 aa16.92■□□□□ 0.3
TRAF3IP2-211ENST00000528599 CDCA8Q53HL2 280 aa16.92■□□□□ 0.3
TRAF3IP2-211ENST00000528599 POLR3GLQ9BT43 218 aa16.92■□□□□ 0.3
TRAF3IP2-211ENST00000528599 NUTM2FA1L443 756 aa16.91■□□□□ 0.3
TRAF3IP2-211ENST00000528599 PUS7Q96PZ0 661 aaKnown RBP16.91■□□□□ 0.3
TRAF3IP2-211ENST00000528599 PRR36Q9H6K5 1346 aa16.91■□□□□ 0.3
TRAF3IP2-211ENST00000528599 FMN2Q9NZ56 1722 aa16.91■□□□□ 0.3
TRAF3IP2-211ENST00000528599 NUDT16Q96DE0 195 aaKnown RBP16.9■□□□□ 0.3
TRAF3IP2-211ENST00000528599 ATP7BP35670 1465 aa16.89■□□□□ 0.29
TRAF3IP2-211ENST00000528599 C1orf167Q5SNV9 1468 aa16.89■□□□□ 0.29
TRAF3IP2-211ENST00000528599 USP32Q8NFA0 1604 aa16.89■□□□□ 0.29
TRAF3IP2-211ENST00000528599 BRINP3Q76B58 766 aa16.88■□□□□ 0.29
TRAF3IP2-211ENST00000528599 ATAD2Q6PL18 1390 aa16.88■□□□□ 0.29
TRAF3IP2-211ENST00000528599 ANKARQ7Z5J8 1434 aa16.86■□□□□ 0.29
TRAF3IP2-211ENST00000528599 CCDC61Q9Y6R9 512 aa16.86■□□□□ 0.29
TRAF3IP2-211ENST00000528599 RGPD8O14715 1765 aaPredicted RBP16.86■□□□□ 0.29
TRAF3IP2-211ENST00000528599 MYOM1P52179 1685 aa16.86■□□□□ 0.29
TRAF3IP2-211ENST00000528599 ORAI2Q96SN7 254 aa16.85■□□□□ 0.29
TRAF3IP2-211ENST00000528599 SLC12A5Q9H2X9 1139 aa16.85■□□□□ 0.29
TRAF3IP2-211ENST00000528599 TMC1Q8TDI8 760 aa16.85■□□□□ 0.29
TRAF3IP2-211ENST00000528599 DDX17Q92841 729 aaKnown RBP16.85■□□□□ 0.29
TRAF3IP2-211ENST00000528599 CABP1Q9NZU7 370 aa16.85■□□□□ 0.29
TRAF3IP2-211ENST00000528599 PHLPP1O60346 1717 aa16.84■□□□□ 0.29
TRAF3IP2-211ENST00000528599 TOPAZ1Q8N9V7 1692 aa16.84■□□□□ 0.29
TRAF3IP2-211ENST00000528599 COL16A1Q07092 1604 aaPredicted RBP16.84■□□□□ 0.29
TRAF3IP2-211ENST00000528599 NHSL1Q5SYE7 1610 aa16.84■□□□□ 0.29
TRAF3IP2-211ENST00000528599 AHDC1Q5TGY3 1603 aaPredicted RBP16.84■□□□□ 0.29
TRAF3IP2-211ENST00000528599 PPIP5K1Q6PFW1 1433 aa16.84■□□□□ 0.29
TRAF3IP2-211ENST00000528599 DDX10Q13206 875 aaKnown RBP16.82■□□□□ 0.28
TRAF3IP2-211ENST00000528599 PLEKHG3A1L390 1219 aa16.81■□□□□ 0.28
TRAF3IP2-211ENST00000528599 ESCO1Q5FWF5 840 aa16.81■□□□□ 0.28
TRAF3IP2-211ENST00000528599 NINLQ9Y2I6 1382 aa16.81■□□□□ 0.28
TRAF3IP2-211ENST00000528599 ITSN1Q15811 1721 aa16.81■□□□□ 0.28
TRAF3IP2-211ENST00000528599 PMFBP1Q8TBY8 1022 aa16.8■□□□□ 0.28
TRAF3IP2-211ENST00000528599 CD163L1Q9NR16 1453 aa16.8■□□□□ 0.28
TRAF3IP2-211ENST00000528599 PANK3Q9H999 370 aa16.79■□□□□ 0.28
TRAF3IP2-211ENST00000528599 PHF8Q9UPP1 1060 aa16.79■□□□□ 0.28
TRAF3IP2-211ENST00000528599 ACEP12821 1306 aa16.78■□□□□ 0.28
TRAF3IP2-211ENST00000528599 ANKRD36BQ8N2N9 1353 aa16.77■□□□□ 0.28
TRAF3IP2-211ENST00000528599 CPSF1Q10570 1443 aaKnown RBP16.77■□□□□ 0.27
TRAF3IP2-211ENST00000528599 A0A1W2PP64 1363 aa16.76■□□□□ 0.27
TRAF3IP2-211ENST00000528599 POLR3AO14802 1390 aaPredicted RBP16.76■□□□□ 0.27
TRAF3IP2-211ENST00000528599 SOCS7O14512 581 aa16.76■□□□□ 0.27
TRAF3IP2-211ENST00000528599 CARD14Q9BXL6 1004 aa16.76■□□□□ 0.27
TRAF3IP2-211ENST00000528599 TERF2IPQ9NYB0 399 aa16.76■□□□□ 0.27
TRAF3IP2-211ENST00000528599 NGDNQ8NEJ9 315 aaKnown RBP16.75■□□□□ 0.27
TRAF3IP2-211ENST00000528599 HDGFL2Q7Z4V5 671 aaPredicted RBP16.75■□□□□ 0.27
TRAF3IP2-211ENST00000528599 PXDNQ92626 1479 aa16.75■□□□□ 0.27
TRAF3IP2-211ENST00000528599 KIF1AQ12756 1690 aa16.74■□□□□ 0.27
TRAF3IP2-211ENST00000528599 FOXO3O43524 673 aa16.74■□□□□ 0.27
TRAF3IP2-211ENST00000528599 AKAP12Q02952 1782 aa16.74■□□□□ 0.27
TRAF3IP2-211ENST00000528599 PER1O15534 1290 aaPredicted RBP16.73■□□□□ 0.27
TRAF3IP2-211ENST00000528599 SOS2Q07890 1332 aaPredicted RBP16.73■□□□□ 0.27
TRAF3IP2-211ENST00000528599 KTN1Q86UP2 1357 aaKnown RBP16.73■□□□□ 0.27
TRAF3IP2-211ENST00000528599 XPCQ01831 940 aaPredicted RBP16.72■□□□□ 0.27
TRAF3IP2-211ENST00000528599 ZNF692Q9BU19 519 aaPredicted RBP16.72■□□□□ 0.27
TRAF3IP2-211ENST00000528599 USP6P35125 1406 aa16.71■□□□□ 0.27
TRAF3IP2-211ENST00000528599 SHPRHQ149N8 1683 aa16.71■□□□□ 0.27
TRAF3IP2-211ENST00000528599 MON2Q7Z3U7 1717 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms