RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 PPLO60437 1756 aa16.98■□□□□ 0.31
CCDC90B-210ENST00000528149 IFT172Q9UG01 1749 aa16.98■□□□□ 0.31
CCDC90B-210ENST00000528149 ZNF326Q5BKZ1 582 aaKnown RBP16.97■□□□□ 0.31
CCDC90B-210ENST00000528149 FNBP4Q8N3X1 1017 aaPredicted RBP16.97■□□□□ 0.31
CCDC90B-210ENST00000528149 SPATA31E1Q6ZUB1 1445 aa16.96■□□□□ 0.31
CCDC90B-210ENST00000528149 LAMC1P11047 1609 aa16.96■□□□□ 0.3
CCDC90B-210ENST00000528149 PTCH1Q13635 1447 aa16.96■□□□□ 0.3
CCDC90B-210ENST00000528149 NALCNQ8IZF0 1738 aa16.95■□□□□ 0.3
CCDC90B-210ENST00000528149 CCDC144AA2RUR9 1427 aa16.95■□□□□ 0.3
CCDC90B-210ENST00000528149 BLMP54132 1417 aaPredicted RBP16.95■□□□□ 0.3
CCDC90B-210ENST00000528149 ADGRL3Q9HAR2 1447 aa16.95■□□□□ 0.3
CCDC90B-210ENST00000528149 DEFB132Q7Z7B7 95 aa16.94■□□□□ 0.3
CCDC90B-210ENST00000528149 BCL9LQ86UU0 1499 aa16.93■□□□□ 0.3
CCDC90B-210ENST00000528149 ANKRD30BQ9BXX2 1392 aa16.92■□□□□ 0.3
CCDC90B-210ENST00000528149 RGL3Q3MIN7 710 aa16.92■□□□□ 0.3
CCDC90B-210ENST00000528149 C1orf167Q5SNV9 1468 aa16.92■□□□□ 0.3
CCDC90B-210ENST00000528149 COL22A1Q8NFW1 1626 aaPredicted RBP16.92■□□□□ 0.3
CCDC90B-210ENST00000528149 METP08581 1390 aa16.9■□□□□ 0.3
CCDC90B-210ENST00000528149 ADGRF5Q8IZF2 1346 aa16.9■□□□□ 0.3
CCDC90B-210ENST00000528149 MYOM2P54296 1465 aa16.89■□□□□ 0.29
CCDC90B-210ENST00000528149 SOS2Q07890 1332 aaPredicted RBP16.89■□□□□ 0.29
CCDC90B-210ENST00000528149 MARF1Q9Y4F3 1742 aaKnown RBP16.87■□□□□ 0.29
CCDC90B-210ENST00000528149 GLI3P10071 1580 aa16.87■□□□□ 0.29
CCDC90B-210ENST00000528149 GJD4Q96KN9 370 aaPredicted RBP16.87■□□□□ 0.29
CCDC90B-210ENST00000528149 BRWD3Q6RI45 1802 aa16.86■□□□□ 0.29
CCDC90B-210ENST00000528149 PSDA5PKW4 1024 aaPredicted RBP16.86■□□□□ 0.29
CCDC90B-210ENST00000528149 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.86■□□□□ 0.29
CCDC90B-210ENST00000528149 RALGAPBQ86X10 1494 aa16.85■□□□□ 0.29
CCDC90B-210ENST00000528149 ORAI2Q96SN7 254 aa16.84■□□□□ 0.29
CCDC90B-210ENST00000528149 SF3B2Q13435 895 aaKnown RBP16.82■□□□□ 0.28
CCDC90B-210ENST00000528149 PIK3C2GO75747 1445 aa16.8■□□□□ 0.28
CCDC90B-210ENST00000528149 CCER1Q8TC90 406 aaPredicted RBP16.79■□□□□ 0.28
CCDC90B-210ENST00000528149 SIN3AQ96ST3 1273 aa16.79■□□□□ 0.28
CCDC90B-210ENST00000528149 NRXN1Q9ULB1 1477 aa16.79■□□□□ 0.28
CCDC90B-210ENST00000528149 PXDNQ92626 1479 aa16.78■□□□□ 0.28
CCDC90B-210ENST00000528149 RPGRIP1LQ68CZ1 1315 aa16.77■□□□□ 0.28
CCDC90B-210ENST00000528149 TMEM132EQ6IEE7 984 aa16.77■□□□□ 0.28
CCDC90B-210ENST00000528149 ROBO2Q9HCK4 1378 aa16.77■□□□□ 0.27
CCDC90B-210ENST00000528149 SLIT2O94813 1529 aa16.76■□□□□ 0.27
CCDC90B-210ENST00000528149 UNC5CLQ8IV45 518 aa16.76■□□□□ 0.27
CCDC90B-210ENST00000528149 KDM2AQ9Y2K7 1162 aa16.76■□□□□ 0.27
CCDC90B-210ENST00000528149 VGFO15240 615 aaPredicted RBP16.75■□□□□ 0.27
CCDC90B-210ENST00000528149 YY1P25490 414 aa16.75■□□□□ 0.27
CCDC90B-210ENST00000528149 NEUROD1Q13562 356 aa16.75■□□□□ 0.27
CCDC90B-210ENST00000528149 SEPT12Q8IYM1 358 aa16.75■□□□□ 0.27
CCDC90B-210ENST00000528149 CFAP70Q5T0N1 1121 aa16.74■□□□□ 0.27
CCDC90B-210ENST00000528149 PLEKHH1Q9ULM0 1364 aa16.73■□□□□ 0.27
CCDC90B-210ENST00000528149 NPHP3Q7Z494 1330 aa16.72■□□□□ 0.27
CCDC90B-210ENST00000528149 XPCQ01831 940 aaPredicted RBP16.72■□□□□ 0.27
CCDC90B-210ENST00000528149 DCAF11Q8TEB1 546 aa16.72■□□□□ 0.27
CCDC90B-210ENST00000528149 STK26Q9P289 416 aa16.72■□□□□ 0.27
CCDC90B-210ENST00000528149 CLSPNQ9HAW4 1339 aa16.71■□□□□ 0.27
CCDC90B-210ENST00000528149 BAG6P46379 1132 aa16.71■□□□□ 0.27
CCDC90B-210ENST00000528149 ADGRB1O14514 1584 aa16.71■□□□□ 0.27
CCDC90B-210ENST00000528149 USP32Q8NFA0 1604 aa16.7■□□□□ 0.26
CCDC90B-210ENST00000528149 KNDC1Q76NI1 1749 aa16.7■□□□□ 0.26
CCDC90B-210ENST00000528149 KRT27Q7Z3Y8 459 aa16.7■□□□□ 0.26
CCDC90B-210ENST00000528149 R3HDM1Q15032 1099 aaKnown RBP16.69■□□□□ 0.26
CCDC90B-210ENST00000528149 WAPLQ7Z5K2 1190 aa16.68■□□□□ 0.26
CCDC90B-210ENST00000528149 CDC42BPGQ6DT37 1551 aa16.68■□□□□ 0.26
CCDC90B-210ENST00000528149 TONSLQ96HA7 1378 aa16.67■□□□□ 0.26
CCDC90B-210ENST00000528149 PLCH1Q4KWH8 1693 aa16.67■□□□□ 0.26
CCDC90B-210ENST00000528149 ESCO1Q5FWF5 840 aa16.67■□□□□ 0.26
CCDC90B-210ENST00000528149 YTHDC2Q9H6S0 1430 aaKnown RBP16.67■□□□□ 0.26
CCDC90B-210ENST00000528149 LRPPRCP42704 1394 aaKnown RBP16.66■□□□□ 0.26
CCDC90B-210ENST00000528149 FOXO3O43524 673 aa16.66■□□□□ 0.26
CCDC90B-210ENST00000528149 EN1Q05925 392 aaPredicted RBP16.66■□□□□ 0.26
CCDC90B-210ENST00000528149 PRAG1Q86YV5 1406 aa16.66■□□□□ 0.26
CCDC90B-210ENST00000528149 RGPD1P0DJD0 1748 aa16.65■□□□□ 0.26
CCDC90B-210ENST00000528149 VPS72Q15906 364 aa16.65■□□□□ 0.26
CCDC90B-210ENST00000528149 C14orf93Q9H972 538 aaKnown RBP16.65■□□□□ 0.26
CCDC90B-210ENST00000528149 ONECUT3O60422 494 aaPredicted RBP16.64■□□□□ 0.25
CCDC90B-210ENST00000528149 L3MBTL2Q969R5 705 aa16.64■□□□□ 0.25
CCDC90B-210ENST00000528149 NWD2Q9ULI1 1742 aa16.64■□□□□ 0.25
CCDC90B-210ENST00000528149 TECPR2O15040 1411 aa16.63■□□□□ 0.25
CCDC90B-210ENST00000528149 TRPM1Q7Z4N2 1603 aa16.63■□□□□ 0.25
CCDC90B-210ENST00000528149 TNS1Q9HBL0 1735 aaKnown RBP16.62■□□□□ 0.25
CCDC90B-210ENST00000528149 KIAA1210Q9ULL0 1709 aa16.62■□□□□ 0.25
CCDC90B-210ENST00000528149 SAFB2Q14151 953 aaKnown RBP eCLIP16.62■□□□□ 0.25
CCDC90B-210ENST00000528149 CCDC9Q9Y3X0 531 aaKnown RBP16.62■□□□□ 0.25
CCDC90B-210ENST00000528149 ARHGEF28Q8N1W1 1705 aaKnown RBP16.62■□□□□ 0.25
CCDC90B-210ENST00000528149 A0A0G2JS52 829 aa16.61■□□□□ 0.25
CCDC90B-210ENST00000528149 MYT1Q01538 1121 aa16.61■□□□□ 0.25
CCDC90B-210ENST00000528149 NBPF1Q3BBV0 1214 aa16.61■□□□□ 0.25
CCDC90B-210ENST00000528149 DISP2A7MBM2 1401 aa16.61■□□□□ 0.25
CCDC90B-210ENST00000528149 SPATA31A3Q5VYP0 1347 aa16.6■□□□□ 0.25
CCDC90B-210ENST00000528149 NUTM2FA1L443 756 aa16.59■□□□□ 0.25
CCDC90B-210ENST00000528149 ABCC11Q96J66 1382 aa16.59■□□□□ 0.25
CCDC90B-210ENST00000528149 ABCA3Q99758 1704 aa16.59■□□□□ 0.25
CCDC90B-210ENST00000528149 TRAK1Q9UPV9 953 aa16.58■□□□□ 0.24
CCDC90B-210ENST00000528149 FMN2Q9NZ56 1722 aa16.57■□□□□ 0.24
CCDC90B-210ENST00000528149 NBPF8Q3BBV2 869 aa16.57■□□□□ 0.24
CCDC90B-210ENST00000528149 FAM182BQ5T319 152 aa16.57■□□□□ 0.24
CCDC90B-210ENST00000528149 PRAM1Q96QH2 718 aa16.57■□□□□ 0.24
CCDC90B-210ENST00000528149 NRAPQ86VF7 1730 aa16.56■□□□□ 0.24
CCDC90B-210ENST00000528149 EZH2Q15910 746 aaKnown RBP16.56■□□□□ 0.24
CCDC90B-210ENST00000528149 FAM98CQ17RN3 349 aaKnown RBP16.56■□□□□ 0.24
CCDC90B-210ENST00000528149 RGPD8O14715 1765 aaPredicted RBP16.56■□□□□ 0.24
CCDC90B-210ENST00000528149 KIF1AQ12756 1690 aa16.56■□□□□ 0.24
CCDC90B-210ENST00000528149 DLC1Q96QB1 1528 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms