RNA–Protein interactions for RNA: ENST00000527363.5

C11orf54-205, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 1,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-205ENST00000527363 DISP2A7MBM2 1401 aa16.53■□□□□ 0.24
C11orf54-205ENST00000527363 NPHP3Q7Z494 1330 aa16.52■□□□□ 0.24
C11orf54-205ENST00000527363 NINLQ9Y2I6 1382 aa16.51■□□□□ 0.23
C11orf54-205ENST00000527363 XRN1Q8IZH2 1706 aaKnown RBP16.51■□□□□ 0.23
C11orf54-205ENST00000527363 ABCC5O15440 1437 aa16.47■□□□□ 0.23
C11orf54-205ENST00000527363 PPP1R1BQ9UD71 204 aaPredicted RBP16.47■□□□□ 0.23
C11orf54-205ENST00000527363 ANKRD30AQ9BXX3 1397 aa16.47■□□□□ 0.23
C11orf54-205ENST00000527363 GCC2Q8IWJ2 1684 aa16.46■□□□□ 0.23
C11orf54-205ENST00000527363 SPON1Q9HCB6 807 aa16.45■□□□□ 0.22
C11orf54-205ENST00000527363 METP08581 1390 aa16.45■□□□□ 0.22
C11orf54-205ENST00000527363 LRPPRCP42704 1394 aaKnown RBP16.45■□□□□ 0.22
C11orf54-205ENST00000527363 PARD3Q8TEW0 1356 aa16.45■□□□□ 0.22
C11orf54-205ENST00000527363 BRWD3Q6RI45 1802 aa16.43■□□□□ 0.22
C11orf54-205ENST00000527363 PTPN23Q9H3S7 1636 aa16.43■□□□□ 0.22
C11orf54-205ENST00000527363 MARF1Q9Y4F3 1742 aaKnown RBP16.42■□□□□ 0.22
C11orf54-205ENST00000527363 CAMKK2Q96RR4 588 aa16.42■□□□□ 0.22
C11orf54-205ENST00000527363 CCDC9Q9Y3X0 531 aaKnown RBP16.42■□□□□ 0.22
C11orf54-205ENST00000527363 MYO5BQ9ULV0 1848 aa16.42■□□□□ 0.22
C11orf54-205ENST00000527363 PXDNQ92626 1479 aa16.42■□□□□ 0.22
C11orf54-205ENST00000527363 EZH2Q15910 746 aaKnown RBP16.41■□□□□ 0.22
C11orf54-205ENST00000527363 ADGRL2O95490 1459 aa16.41■□□□□ 0.22
C11orf54-205ENST00000527363 A0A0G2JS52 829 aa16.4■□□□□ 0.22
C11orf54-205ENST00000527363 MYT1Q01538 1121 aa16.4■□□□□ 0.22
C11orf54-205ENST00000527363 NBPF8Q3BBV2 869 aa16.4■□□□□ 0.22
C11orf54-205ENST00000527363 ESCO1Q5FWF5 840 aa16.4■□□□□ 0.22
C11orf54-205ENST00000527363 NBPF14Q5TI25 921 aa16.4■□□□□ 0.22
C11orf54-205ENST00000527363 KCNQ2O43526 872 aa16.39■□□□□ 0.21
C11orf54-205ENST00000527363 NALCNQ8IZF0 1738 aa16.39■□□□□ 0.21
C11orf54-205ENST00000527363 DAPK1P53355 1430 aa16.38■□□□□ 0.21
C11orf54-205ENST00000527363 FOXO3O43524 673 aa16.38■□□□□ 0.21
C11orf54-205ENST00000527363 RGPD1P0DJD0 1748 aa16.36■□□□□ 0.21
C11orf54-205ENST00000527363 NRXN3Q9Y4C0 1643 aa16.36■□□□□ 0.21
C11orf54-205ENST00000527363 SPATA31A3Q5VYP0 1347 aa16.36■□□□□ 0.21
C11orf54-205ENST00000527363 HAP1P54257 671 aaPredicted RBP16.34■□□□□ 0.21
C11orf54-205ENST00000527363 FAM98CQ17RN3 349 aaKnown RBP16.34■□□□□ 0.21
C11orf54-205ENST00000527363 UTRNP46939 3433 aa16.34■□□□□ 0.21
C11orf54-205ENST00000527363 CROCC2H7BZ55 1655 aa16.34■□□□□ 0.21
C11orf54-205ENST00000527363 CHIC2Q9UKJ5 165 aa16.33■□□□□ 0.2
C11orf54-205ENST00000527363 PRAG1Q86YV5 1406 aa16.33■□□□□ 0.2
C11orf54-205ENST00000527363 ADGRB2O60241 1585 aa16.33■□□□□ 0.2
C11orf54-205ENST00000527363 HFM1A2PYH4 1435 aa16.32■□□□□ 0.2
C11orf54-205ENST00000527363 XPCQ01831 940 aaPredicted RBP16.32■□□□□ 0.2
C11orf54-205ENST00000527363 FAM196AQ6ZSG2 479 aa16.32■□□□□ 0.2
C11orf54-205ENST00000527363 USP32Q8NFA0 1604 aa16.32■□□□□ 0.2
C11orf54-205ENST00000527363 ANKRD50Q9ULJ7 1429 aa16.31■□□□□ 0.2
C11orf54-205ENST00000527363 ROBO2Q9HCK4 1378 aa16.31■□□□□ 0.2
C11orf54-205ENST00000527363 ADRA2BP18089 450 aa16.31■□□□□ 0.2
C11orf54-205ENST00000527363 GIGYF1O75420 1035 aaPredicted RBP16.3■□□□□ 0.2
C11orf54-205ENST00000527363 APBA3O96018 575 aa16.3■□□□□ 0.2
C11orf54-205ENST00000527363 CEP350Q5VT06 3117 aa16.3■□□□□ 0.2
C11orf54-205ENST00000527363 NWD2Q9ULI1 1742 aa16.28■□□□□ 0.2
C11orf54-205ENST00000527363 IQGAP3Q86VI3 1631 aa16.28■□□□□ 0.2
C11orf54-205ENST00000527363 ZNF326Q5BKZ1 582 aaKnown RBP16.28■□□□□ 0.2
C11orf54-205ENST00000527363 CCDC144AA2RUR9 1427 aa16.28■□□□□ 0.2
C11orf54-205ENST00000527363 TRIM37O94972 964 aa16.27■□□□□ 0.2
C11orf54-205ENST00000527363 FAM182BQ5T319 152 aa16.27■□□□□ 0.2
C11orf54-205ENST00000527363 FAM83GA6ND36 823 aa16.25■□□□□ 0.19
C11orf54-205ENST00000527363 KANK4Q5T7N3 995 aaPredicted RBP16.25■□□□□ 0.19
C11orf54-205ENST00000527363 PSME1Q06323 249 aa16.24■□□□□ 0.19
C11orf54-205ENST00000527363 KRT28Q7Z3Y7 464 aa16.24■□□□□ 0.19
C11orf54-205ENST00000527363 CDC42BPGQ6DT37 1551 aa16.24■□□□□ 0.19
C11orf54-205ENST00000527363 TNS1Q9HBL0 1735 aaKnown RBP16.24■□□□□ 0.19
C11orf54-205ENST00000527363 SPATA31A5Q5VU36 1347 aa16.22■□□□□ 0.19
C11orf54-205ENST00000527363 SPATA31A7Q8IWB4 1347 aa16.22■□□□□ 0.19
C11orf54-205ENST00000527363 TNS3Q68CZ2 1445 aa16.21■□□□□ 0.19
C11orf54-205ENST00000527363 CABLES1Q8TDN4 633 aa16.21■□□□□ 0.19
C11orf54-205ENST00000527363 BTG4Q9NY30 223 aa16.21■□□□□ 0.19
C11orf54-205ENST00000527363 ARHGEF10O15013 1369 aa16.21■□□□□ 0.19
C11orf54-205ENST00000527363 CAMTA1Q9Y6Y1 1673 aa16.2■□□□□ 0.18
C11orf54-205ENST00000527363 PLCH1Q4KWH8 1693 aa16.19■□□□□ 0.18
C11orf54-205ENST00000527363 SBNO1A3KN83 1393 aa16.19■□□□□ 0.18
C11orf54-205ENST00000527363 VGFO15240 615 aaPredicted RBP16.19■□□□□ 0.18
C11orf54-205ENST00000527363 E9PCH4 1651 aa16.18■□□□□ 0.18
C11orf54-205ENST00000527363 SYT17Q9BSW7 474 aa16.18■□□□□ 0.18
C11orf54-205ENST00000527363 NEXMIFQ5QGS0 1516 aa16.18■□□□□ 0.18
C11orf54-205ENST00000527363 RREB1Q92766 1687 aa16.17■□□□□ 0.18
C11orf54-205ENST00000527363 RRBP1Q9P2E9 1410 aaKnown RBP16.16■□□□□ 0.18
C11orf54-205ENST00000527363 THSD7AQ9UPZ6 1657 aa16.15■□□□□ 0.18
C11orf54-205ENST00000527363 C11orf95C9JLR9 678 aaPredicted RBP16.15■□□□□ 0.18
C11orf54-205ENST00000527363 NAIPQ13075 1403 aa16.15■□□□□ 0.18
C11orf54-205ENST00000527363 VPS8Q8N3P4 1428 aa16.14■□□□□ 0.17
C11orf54-205ENST00000527363 PTGER2P43116 358 aa16.13■□□□□ 0.17
C11orf54-205ENST00000527363 FHDC1Q9C0D6 1143 aaPredicted RBP16.13■□□□□ 0.17
C11orf54-205ENST00000527363 NUP188Q5SRE5 1749 aa16.13■□□□□ 0.17
C11orf54-205ENST00000527363 KIF1AQ12756 1690 aa16.12■□□□□ 0.17
C11orf54-205ENST00000527363 NUTM2FA1L443 756 aa16.12■□□□□ 0.17
C11orf54-205ENST00000527363 PDE3BQ13370 1112 aa16.12■□□□□ 0.17
C11orf54-205ENST00000527363 SPATA31A1Q5TZJ5 1347 aa16.12■□□□□ 0.17
C11orf54-205ENST00000527363 LMOD2Q6P5Q4 547 aa16.11■□□□□ 0.17
C11orf54-205ENST00000527363 PHF8Q9UPP1 1060 aa16.11■□□□□ 0.17
C11orf54-205ENST00000527363 NRKQ7Z2Y5 1582 aa16.11■□□□□ 0.17
C11orf54-205ENST00000527363 NUP155O75694 1391 aa16.11■□□□□ 0.17
C11orf54-205ENST00000527363 NRAPQ86VF7 1730 aa16.11■□□□□ 0.17
C11orf54-205ENST00000527363 CHD4Q14839 1912 aa16.1■□□□□ 0.17
C11orf54-205ENST00000527363 PLSCR1O15162 318 aa16.09■□□□□ 0.17
C11orf54-205ENST00000527363 RPGRIP1LQ68CZ1 1315 aa16.09■□□□□ 0.17
C11orf54-205ENST00000527363 HSPA6P17066 643 aa16.08■□□□□ 0.16
C11orf54-205ENST00000527363 MAP3K5Q99683 1374 aa16.08■□□□□ 0.16
C11orf54-205ENST00000527363 PLEKHG5O94827 1062 aa16.07■□□□□ 0.16
C11orf54-205ENST00000527363 ZBTB7AO95365 584 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms