RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 FAM135BQ49AJ0 1406 aa26■■□□□ 1.75
SMPD1-203ENST00000527275 CHD2O14647 1828 aaKnown RBP25.99■■□□□ 1.75
SMPD1-203ENST00000527275 SLC24A1O60721 1099 aa25.99■■□□□ 1.75
SMPD1-203ENST00000527275 XRN1Q8IZH2 1706 aaKnown RBP25.98■■□□□ 1.75
SMPD1-203ENST00000527275 MINK1Q8N4C8 1332 aaPredicted RBP25.98■■□□□ 1.75
SMPD1-203ENST00000527275 PTCH1Q13635 1447 aa25.96■■□□□ 1.75
SMPD1-203ENST00000527275 ANP32CO43423 234 aa25.95■■□□□ 1.74
SMPD1-203ENST00000527275 CDCA8Q53HL2 280 aa25.93■■□□□ 1.74
SMPD1-203ENST00000527275 EVC2Q86UK5 1308 aa25.92■■□□□ 1.74
SMPD1-203ENST00000527275 TULP4Q9NRJ4 1543 aa25.91■■□□□ 1.74
SMPD1-203ENST00000527275 AEBP2Q6ZN18 517 aaPredicted RBP25.89■■□□□ 1.73
SMPD1-203ENST00000527275 RBM33Q96EV2 1170 aaKnown RBP25.88■■□□□ 1.73
SMPD1-203ENST00000527275 NWD1Q149M9 1564 aa25.88■■□□□ 1.73
SMPD1-203ENST00000527275 DMRT2Q9Y5R5 561 aa25.88■■□□□ 1.73
SMPD1-203ENST00000527275 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.87■■□□□ 1.73
SMPD1-203ENST00000527275 CABP2Q9NPB3 220 aa25.87■■□□□ 1.73
SMPD1-203ENST00000527275 SRPK2P78362 688 aaKnown RBP25.86■■□□□ 1.73
SMPD1-203ENST00000527275 CDK19Q9BWU1 502 aa25.86■■□□□ 1.73
SMPD1-203ENST00000527275 WASLO00401 505 aaPredicted RBP25.83■■□□□ 1.73
SMPD1-203ENST00000527275 STRCP1A6NGW2 1772 aa25.83■■□□□ 1.73
SMPD1-203ENST00000527275 CCER2I3L3R5 266 aa25.83■■□□□ 1.73
SMPD1-203ENST00000527275 PROSER2Q86WR7 435 aaPredicted RBP25.82■■□□□ 1.72
SMPD1-203ENST00000527275 PUS7Q96PZ0 661 aaKnown RBP25.82■■□□□ 1.72
SMPD1-203ENST00000527275 ZNF335Q9H4Z2 1342 aaPredicted RBP25.81■■□□□ 1.72
SMPD1-203ENST00000527275 NKTRP30414 1462 aaKnown RBP25.81■■□□□ 1.72
SMPD1-203ENST00000527275 ADGRB2O60241 1585 aa25.79■■□□□ 1.72
SMPD1-203ENST00000527275 TMC1Q8TDI8 760 aa25.77■■□□□ 1.72
SMPD1-203ENST00000527275 MYOM1P52179 1685 aa25.76■■□□□ 1.72
SMPD1-203ENST00000527275 SLC12A5Q9H2X9 1139 aa25.76■■□□□ 1.71
SMPD1-203ENST00000527275 C14orf37Q86TY3 774 aa25.76■■□□□ 1.71
SMPD1-203ENST00000527275 ATAD2Q6PL18 1390 aa25.75■■□□□ 1.71
SMPD1-203ENST00000527275 PANK3Q9H999 370 aa25.75■■□□□ 1.71
SMPD1-203ENST00000527275 NALCNQ8IZF0 1738 aa25.75■■□□□ 1.71
SMPD1-203ENST00000527275 NUTM2FA1L443 756 aa25.74■■□□□ 1.71
SMPD1-203ENST00000527275 TMEM94Q12767 1356 aa25.74■■□□□ 1.71
SMPD1-203ENST00000527275 ADGRL3Q9HAR2 1447 aa25.74■■□□□ 1.71
SMPD1-203ENST00000527275 NUDT16Q96DE0 195 aaKnown RBP25.72■■□□□ 1.71
SMPD1-203ENST00000527275 PRR36Q9H6K5 1346 aa25.71■■□□□ 1.71
SMPD1-203ENST00000527275 CABP1Q9NZU7 370 aa25.69■■□□□ 1.7
SMPD1-203ENST00000527275 CCDC61Q9Y6R9 512 aa25.69■■□□□ 1.7
SMPD1-203ENST00000527275 ATP7BP35670 1465 aa25.69■■□□□ 1.7
SMPD1-203ENST00000527275 PER1O15534 1290 aaPredicted RBP25.68■■□□□ 1.7
SMPD1-203ENST00000527275 C19orf44Q9H6X5 657 aa25.68■■□□□ 1.7
SMPD1-203ENST00000527275 SCAF1Q9H7N4 1312 aaKnown RBP25.68■■□□□ 1.7
SMPD1-203ENST00000527275 CDC42BPGQ6DT37 1551 aa25.67■■□□□ 1.7
SMPD1-203ENST00000527275 NINLQ9Y2I6 1382 aa25.67■■□□□ 1.7
SMPD1-203ENST00000527275 LRRC7Q96NW7 1537 aa25.67■■□□□ 1.7
SMPD1-203ENST00000527275 NCOA3Q9Y6Q9 1424 aa25.66■■□□□ 1.7
SMPD1-203ENST00000527275 PPIP5K1Q6PFW1 1433 aa25.65■■□□□ 1.7
SMPD1-203ENST00000527275 CARD14Q9BXL6 1004 aa25.64■■□□□ 1.7
SMPD1-203ENST00000527275 USP32Q8NFA0 1604 aa25.64■■□□□ 1.69
SMPD1-203ENST00000527275 FMN2Q9NZ56 1722 aa25.63■■□□□ 1.69
SMPD1-203ENST00000527275 PRKRIP1Q9H875 184 aaPredicted RBP25.63■■□□□ 1.69
SMPD1-203ENST00000527275 ANKRD36BQ8N2N9 1353 aa25.62■■□□□ 1.69
SMPD1-203ENST00000527275 XIRP1Q702N8 1843 aaKnown RBP25.62■■□□□ 1.69
SMPD1-203ENST00000527275 RGPD8O14715 1765 aaPredicted RBP25.61■■□□□ 1.69
SMPD1-203ENST00000527275 CD163L1Q9NR16 1453 aa25.61■■□□□ 1.69
SMPD1-203ENST00000527275 A0A1W2PP64 1363 aa25.61■■□□□ 1.69
SMPD1-203ENST00000527275 CNGB1Q14028 1251 aaPredicted RBP25.61■■□□□ 1.69
SMPD1-203ENST00000527275 TERF2IPQ9NYB0 399 aa25.61■■□□□ 1.69
SMPD1-203ENST00000527275 ANKARQ7Z5J8 1434 aa25.6■■□□□ 1.69
SMPD1-203ENST00000527275 KNSTRNQ9Y448 316 aa25.6■■□□□ 1.69
SMPD1-203ENST00000527275 MSH6P52701 1360 aa25.59■■□□□ 1.69
SMPD1-203ENST00000527275 ATF3P18847 181 aa25.58■■□□□ 1.69
SMPD1-203ENST00000527275 TOPAZ1Q8N9V7 1692 aa25.58■■□□□ 1.69
SMPD1-203ENST00000527275 PLEKHG3A1L390 1219 aa25.56■■□□□ 1.68
SMPD1-203ENST00000527275 HDGFL2Q7Z4V5 671 aaPredicted RBP25.56■■□□□ 1.68
SMPD1-203ENST00000527275 PMFBP1Q8TBY8 1022 aa25.56■■□□□ 1.68
SMPD1-203ENST00000527275 DCCP43146 1447 aa25.56■■□□□ 1.68
SMPD1-203ENST00000527275 NSD3Q9BZ95 1437 aa25.55■■□□□ 1.68
SMPD1-203ENST00000527275 CPSF1Q10570 1443 aaKnown RBP25.55■■□□□ 1.68
SMPD1-203ENST00000527275 CADPS2Q86UW7 1296 aa25.55■■□□□ 1.68
SMPD1-203ENST00000527275 LTBP4Q8N2S1 1624 aa25.55■■□□□ 1.68
SMPD1-203ENST00000527275 ITSN1Q15811 1721 aa25.54■■□□□ 1.68
SMPD1-203ENST00000527275 ACEP12821 1306 aa25.54■■□□□ 1.68
SMPD1-203ENST00000527275 AMER1Q5JTC6 1135 aaPredicted RBP25.54■■□□□ 1.68
SMPD1-203ENST00000527275 GTF3C3Q9Y5Q9 886 aa25.54■■□□□ 1.68
SMPD1-203ENST00000527275 ESCO1Q5FWF5 840 aa25.53■■□□□ 1.68
SMPD1-203ENST00000527275 CC2D1BQ5T0F9 858 aaKnown RBP25.53■■□□□ 1.68
SMPD1-203ENST00000527275 KTN1Q86UP2 1357 aaKnown RBP25.52■■□□□ 1.68
SMPD1-203ENST00000527275 ORAI2Q96SN7 254 aa25.51■■□□□ 1.67
SMPD1-203ENST00000527275 NGDNQ8NEJ9 315 aaKnown RBP25.51■■□□□ 1.67
SMPD1-203ENST00000527275 C1orf167Q5SNV9 1468 aa25.5■■□□□ 1.67
SMPD1-203ENST00000527275 MST1RQ04912 1400 aa25.5■■□□□ 1.67
SMPD1-203ENST00000527275 ZNF692Q9BU19 519 aaPredicted RBP25.5■■□□□ 1.67
SMPD1-203ENST00000527275 PHF8Q9UPP1 1060 aa25.5■■□□□ 1.67
SMPD1-203ENST00000527275 POLR3AO14802 1390 aaPredicted RBP25.48■■□□□ 1.67
SMPD1-203ENST00000527275 CGNL1Q0VF96 1302 aa25.47■■□□□ 1.67
SMPD1-203ENST00000527275 AKAP12Q02952 1782 aa25.47■■□□□ 1.67
SMPD1-203ENST00000527275 CCDC184Q52MB2 194 aa25.46■■□□□ 1.67
SMPD1-203ENST00000527275 NPC1L1Q9UHC9 1359 aa25.46■■□□□ 1.67
SMPD1-203ENST00000527275 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.45■■□□□ 1.67
SMPD1-203ENST00000527275 MON2Q7Z3U7 1717 aa25.45■■□□□ 1.66
SMPD1-203ENST00000527275 USP6P35125 1406 aa25.44■■□□□ 1.66
SMPD1-203ENST00000527275 EDC4Q6P2E9 1401 aaKnown RBP25.44■■□□□ 1.66
SMPD1-203ENST00000527275 SLAIN2Q9P270 581 aa25.43■■□□□ 1.66
SMPD1-203ENST00000527275 FYB1O15117 783 aa25.42■■□□□ 1.66
SMPD1-203ENST00000527275 PARD3Q8TEW0 1356 aa25.42■■□□□ 1.66
SMPD1-203ENST00000527275 FOXO3O43524 673 aa25.42■■□□□ 1.66
SMPD1-203ENST00000527275 RALBP1Q15311 655 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms