RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 C19orf44Q9H6X5 657 aa23.73■■□□□ 1.39
SMCO4-204ENST00000527149 CARD11Q9BXL7 1154 aa23.71■■□□□ 1.39
SMCO4-204ENST00000527149 FMN2Q9NZ56 1722 aa23.7■■□□□ 1.39
SMCO4-204ENST00000527149 C14orf37Q86TY3 774 aa23.7■■□□□ 1.38
SMCO4-204ENST00000527149 MST1RQ04912 1400 aa23.69■■□□□ 1.38
SMCO4-204ENST00000527149 SAFB2Q14151 953 aaKnown RBP eCLIP23.68■■□□□ 1.38
SMCO4-204ENST00000527149 POGKQ9P215 609 aa23.68■■□□□ 1.38
SMCO4-204ENST00000527149 UBAP1LF5GYI3 381 aa23.67■■□□□ 1.38
SMCO4-204ENST00000527149 EIF3AQ14152 1382 aaKnown RBP23.66■■□□□ 1.38
SMCO4-204ENST00000527149 CENPJQ9HC77 1338 aaPredicted RBP23.66■■□□□ 1.38
SMCO4-204ENST00000527149 CADPS2Q86UW7 1296 aa23.65■■□□□ 1.38
SMCO4-204ENST00000527149 TULP4Q9NRJ4 1543 aa23.64■■□□□ 1.38
SMCO4-204ENST00000527149 USP32Q8NFA0 1604 aa23.64■■□□□ 1.38
SMCO4-204ENST00000527149 USP47Q96K76 1375 aa23.64■■□□□ 1.37
SMCO4-204ENST00000527149 SBNO2Q9Y2G9 1366 aa23.64■■□□□ 1.37
SMCO4-204ENST00000527149 MINK1Q8N4C8 1332 aaPredicted RBP23.63■■□□□ 1.37
SMCO4-204ENST00000527149 TOM1O60784 492 aa23.63■■□□□ 1.37
SMCO4-204ENST00000527149 ATF3P18847 181 aa23.63■■□□□ 1.37
SMCO4-204ENST00000527149 ROBO1Q9Y6N7 1651 aa23.63■■□□□ 1.37
SMCO4-204ENST00000527149 C1orf167Q5SNV9 1468 aa23.62■■□□□ 1.37
SMCO4-204ENST00000527149 FBXO41Q8TF61 875 aa23.62■■□□□ 1.37
SMCO4-204ENST00000527149 HIRIP3Q9BW71 556 aaPredicted RBP23.61■■□□□ 1.37
SMCO4-204ENST00000527149 SLAIN2Q9P270 581 aa23.59■■□□□ 1.37
SMCO4-204ENST00000527149 RGPD8O14715 1765 aaPredicted RBP23.58■■□□□ 1.37
SMCO4-204ENST00000527149 ANKARQ7Z5J8 1434 aa23.58■■□□□ 1.36
SMCO4-204ENST00000527149 ATP7BP35670 1465 aa23.57■■□□□ 1.36
SMCO4-204ENST00000527149 WASLO00401 505 aaPredicted RBP23.56■■□□□ 1.36
SMCO4-204ENST00000527149 TESK2Q96S53 571 aa23.56■■□□□ 1.36
SMCO4-204ENST00000527149 TOPAZ1Q8N9V7 1692 aa23.56■■□□□ 1.36
SMCO4-204ENST00000527149 PRR36Q9H6K5 1346 aa23.55■■□□□ 1.36
SMCO4-204ENST00000527149 ST20-MTHFSA0A0A6YYL1 179 aa23.54■■□□□ 1.36
SMCO4-204ENST00000527149 NHSL1Q5SYE7 1610 aa23.54■■□□□ 1.36
SMCO4-204ENST00000527149 PIP4K2BP78356 416 aa23.53■■□□□ 1.36
SMCO4-204ENST00000527149 BRINP3Q76B58 766 aa23.53■■□□□ 1.36
SMCO4-204ENST00000527149 AHDC1Q5TGY3 1603 aaPredicted RBP23.52■■□□□ 1.36
SMCO4-204ENST00000527149 ITSN1Q15811 1721 aa23.51■■□□□ 1.35
SMCO4-204ENST00000527149 KIF1AQ12756 1690 aa23.51■■□□□ 1.35
SMCO4-204ENST00000527149 NUTM2FA1L443 756 aa23.5■■□□□ 1.35
SMCO4-204ENST00000527149 CDK19Q9BWU1 502 aa23.5■■□□□ 1.35
SMCO4-204ENST00000527149 ORAI2Q96SN7 254 aa23.49■■□□□ 1.35
SMCO4-204ENST00000527149 SCAF1Q9H7N4 1312 aaKnown RBP23.48■■□□□ 1.35
SMCO4-204ENST00000527149 COL16A1Q07092 1604 aaPredicted RBP23.47■■□□□ 1.35
SMCO4-204ENST00000527149 EVC2Q86UK5 1308 aa23.46■■□□□ 1.35
SMCO4-204ENST00000527149 DISP3Q9P2K9 1392 aa23.45■■□□□ 1.34
SMCO4-204ENST00000527149 HSPA5P11021 654 aaKnown RBP23.45■■□□□ 1.34
SMCO4-204ENST00000527149 EIF4G2P78344 907 aaKnown RBP eCLIP23.44■■□□□ 1.34
SMCO4-204ENST00000527149 ILDR1Q86SU0 546 aaPredicted RBP23.44■■□□□ 1.34
SMCO4-204ENST00000527149 NUDT16Q96DE0 195 aaKnown RBP23.44■■□□□ 1.34
SMCO4-204ENST00000527149 CABP2Q9NPB3 220 aa23.44■■□□□ 1.34
SMCO4-204ENST00000527149 PHLPP1O60346 1717 aa23.44■■□□□ 1.34
SMCO4-204ENST00000527149 ESCO1Q5FWF5 840 aa23.43■■□□□ 1.34
SMCO4-204ENST00000527149 PXDNQ92626 1479 aa23.42■■□□□ 1.34
SMCO4-204ENST00000527149 HSPA1LP34931 641 aa23.41■■□□□ 1.34
SMCO4-204ENST00000527149 SRPK2P78362 688 aaKnown RBP23.41■■□□□ 1.34
SMCO4-204ENST00000527149 PHF8Q9UPP1 1060 aa23.4■■□□□ 1.34
SMCO4-204ENST00000527149 DDX17Q92841 729 aaKnown RBP23.39■■□□□ 1.33
SMCO4-204ENST00000527149 CCDC61Q9Y6R9 512 aa23.39■■□□□ 1.33
SMCO4-204ENST00000527149 PPIP5K1Q6PFW1 1433 aa23.39■■□□□ 1.33
SMCO4-204ENST00000527149 ATAD2Q6PL18 1390 aa23.39■■□□□ 1.33
SMCO4-204ENST00000527149 ZEB1P37275 1124 aaPredicted RBP23.37■■□□□ 1.33
SMCO4-204ENST00000527149 PUS7Q96PZ0 661 aaKnown RBP23.37■■□□□ 1.33
SMCO4-204ENST00000527149 POLR3AO14802 1390 aaPredicted RBP23.37■■□□□ 1.33
SMCO4-204ENST00000527149 TRPM3Q9HCF6 1732 aaPredicted RBP23.36■■□□□ 1.33
SMCO4-204ENST00000527149 SOS2Q07890 1332 aaPredicted RBP23.36■■□□□ 1.33
SMCO4-204ENST00000527149 MYOM1P52179 1685 aa23.36■■□□□ 1.33
SMCO4-204ENST00000527149 PLEKHG3A1L390 1219 aa23.36■■□□□ 1.33
SMCO4-204ENST00000527149 SLC24A1O60721 1099 aa23.36■■□□□ 1.33
SMCO4-204ENST00000527149 NPHP3Q7Z494 1330 aa23.35■■□□□ 1.33
SMCO4-204ENST00000527149 TMF1P82094 1093 aa23.35■■□□□ 1.33
SMCO4-204ENST00000527149 PMFBP1Q8TBY8 1022 aa23.35■■□□□ 1.33
SMCO4-204ENST00000527149 FOXO3O43524 673 aa23.34■■□□□ 1.33
SMCO4-204ENST00000527149 AKAP12Q02952 1782 aa23.34■■□□□ 1.33
SMCO4-204ENST00000527149 CD163L1Q9NR16 1453 aa23.33■■□□□ 1.33
SMCO4-204ENST00000527149 SHPRHQ149N8 1683 aa23.31■■□□□ 1.32
SMCO4-204ENST00000527149 ACEP12821 1306 aa23.31■■□□□ 1.32
SMCO4-204ENST00000527149 MON2Q7Z3U7 1717 aa23.3■■□□□ 1.32
SMCO4-204ENST00000527149 CABP1Q9NZU7 370 aa23.3■■□□□ 1.32
SMCO4-204ENST00000527149 CPSF1Q10570 1443 aaKnown RBP23.3■■□□□ 1.32
SMCO4-204ENST00000527149 NRKQ7Z2Y5 1582 aa23.3■■□□□ 1.32
SMCO4-204ENST00000527149 ALS2Q96Q42 1657 aa23.29■■□□□ 1.32
SMCO4-204ENST00000527149 XPCQ01831 940 aaPredicted RBP23.29■■□□□ 1.32
SMCO4-204ENST00000527149 NINLQ9Y2I6 1382 aa23.28■■□□□ 1.32
SMCO4-204ENST00000527149 C11orf95C9JLR9 678 aaPredicted RBP23.28■■□□□ 1.32
SMCO4-204ENST00000527149 SSH2Q76I76 1423 aa23.27■■□□□ 1.32
SMCO4-204ENST00000527149 SBNO1A3KN83 1393 aa23.27■■□□□ 1.31
SMCO4-204ENST00000527149 COL22A1Q8NFW1 1626 aaPredicted RBP23.26■■□□□ 1.31
SMCO4-204ENST00000527149 USP6P35125 1406 aa23.26■■□□□ 1.31
SMCO4-204ENST00000527149 TNS3Q68CZ2 1445 aa23.26■■□□□ 1.31
SMCO4-204ENST00000527149 NGDNQ8NEJ9 315 aaKnown RBP23.26■■□□□ 1.31
SMCO4-204ENST00000527149 CDCA8Q53HL2 280 aa23.25■■□□□ 1.31
SMCO4-204ENST00000527149 KRT28Q7Z3Y7 464 aa23.25■■□□□ 1.31
SMCO4-204ENST00000527149 PNPLA6Q8IY17 1366 aa23.25■■□□□ 1.31
SMCO4-204ENST00000527149 JCADQ9P266 1359 aa23.25■■□□□ 1.31
SMCO4-204ENST00000527149 SLC12A5Q9H2X9 1139 aa23.24■■□□□ 1.31
SMCO4-204ENST00000527149 SPATA31A3Q5VYP0 1347 aa23.24■■□□□ 1.31
SMCO4-204ENST00000527149 A0A1W2PP64 1363 aa23.23■■□□□ 1.31
SMCO4-204ENST00000527149 LRRC59Q96AG4 307 aaKnown RBP23.22■■□□□ 1.31
SMCO4-204ENST00000527149 PSME1Q06323 249 aa23.21■■□□□ 1.31
SMCO4-204ENST00000527149 KIF7Q2M1P5 1343 aa23.21■■□□□ 1.31
SMCO4-204ENST00000527149 CRYBG1Q9Y4K1 1723 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms