RNA–Protein interactions for RNA: ENST00000527028.5

PDZD3-206, Transcript of PDZ domain containing 3, humanhuman

TSL 2

Gene PDZD3, Length 2,522 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-206ENST00000527028 CFAP70Q5T0N1 1121 aa23.75■■□□□ 1.39
PDZD3-206ENST00000527028 MROH1Q8NDA8 1641 aa23.75■■□□□ 1.39
PDZD3-206ENST00000527028 WDR63Q8IWG1 891 aa23.75■■□□□ 1.39
PDZD3-206ENST00000527028 RUNDC1Q96C34 613 aa23.75■■□□□ 1.39
PDZD3-206ENST00000527028 UPF2Q9HAU5 1272 aaKnown RBP23.75■■□□□ 1.39
PDZD3-206ENST00000527028 ZC3H13Q5T200 1668 aaKnown RBP23.75■■□□□ 1.39
PDZD3-206ENST00000527028 CCDC27Q2M243 656 aa23.73■■□□□ 1.39
PDZD3-206ENST00000527028 ANTXR1Q9H6X2 564 aa23.73■■□□□ 1.39
PDZD3-206ENST00000527028 EFCAB6Q5THR3 1501 aa23.73■■□□□ 1.39
PDZD3-206ENST00000527028 TBC1D32Q96NH3 1257 aa23.72■■□□□ 1.39
PDZD3-206ENST00000527028 MROH2AA6NES4 1674 aa23.72■■□□□ 1.39
PDZD3-206ENST00000527028 AFAP1Q8N556 730 aa23.71■■□□□ 1.39
PDZD3-206ENST00000527028 ABCA9Q8IUA7 1624 aa23.71■■□□□ 1.39
PDZD3-206ENST00000527028 ADGRF5Q8IZF2 1346 aa23.71■■□□□ 1.39
PDZD3-206ENST00000527028 NSD3Q9BZ95 1437 aa23.7■■□□□ 1.38
PDZD3-206ENST00000527028 UGGT1Q9NYU2 1555 aa23.69■■□□□ 1.38
PDZD3-206ENST00000527028 L1TD1Q5T7N2 865 aaKnown RBP23.69■■□□□ 1.38
PDZD3-206ENST00000527028 ZNF518AQ6AHZ1 1483 aa23.68■■□□□ 1.38
PDZD3-206ENST00000527028 MORC1Q86VD1 984 aa23.67■■□□□ 1.38
PDZD3-206ENST00000527028 RWDD1Q9H446 243 aaPredicted RBP23.67■■□□□ 1.38
PDZD3-206ENST00000527028 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.67■■□□□ 1.38
PDZD3-206ENST00000527028 PCDHB15Q9Y5E8 787 aa23.67■■□□□ 1.38
PDZD3-206ENST00000527028 ADGRL1O94910 1474 aa23.67■■□□□ 1.38
PDZD3-206ENST00000527028 QRICH2Q9H0J4 1663 aa23.67■■□□□ 1.38
PDZD3-206ENST00000527028 POGKQ9P215 609 aa23.67■■□□□ 1.38
PDZD3-206ENST00000527028 ADGRB3O60242 1522 aa23.67■■□□□ 1.38
PDZD3-206ENST00000527028 LMTK2Q8IWU2 1503 aa23.67■■□□□ 1.38
PDZD3-206ENST00000527028 TCP11L2Q8N4U5 519 aa23.66■■□□□ 1.38
PDZD3-206ENST00000527028 FANCAO15360 1455 aa23.66■■□□□ 1.38
PDZD3-206ENST00000527028 RSPH6AQ9H0K4 717 aa23.65■■□□□ 1.38
PDZD3-206ENST00000527028 PDZRN3Q9UPQ7 1066 aa23.65■■□□□ 1.38
PDZD3-206ENST00000527028 SLKQ9H2G2 1235 aaPredicted RBP23.64■■□□□ 1.38
PDZD3-206ENST00000527028 ADGRB2O60241 1585 aa23.64■■□□□ 1.37
PDZD3-206ENST00000527028 RLBP1P12271 317 aa23.64■■□□□ 1.37
PDZD3-206ENST00000527028 PPRC1Q5VV67 1664 aaKnown RBP23.63■■□□□ 1.37
PDZD3-206ENST00000527028 KIF3BO15066 747 aa23.63■■□□□ 1.37
PDZD3-206ENST00000527028 CT47B1P0C2W7 299 aaPredicted RBP23.62■■□□□ 1.37
PDZD3-206ENST00000527028 TBC1D2Q9BYX2 928 aa23.62■■□□□ 1.37
PDZD3-206ENST00000527028 MYH16Q9H6N6 1097 aa23.62■■□□□ 1.37
PDZD3-206ENST00000527028 PPLO60437 1756 aa23.61■■□□□ 1.37
PDZD3-206ENST00000527028 CFAP53Q96M91 514 aa23.61■■□□□ 1.37
PDZD3-206ENST00000527028 ADGRB1O14514 1584 aa23.6■■□□□ 1.37
PDZD3-206ENST00000527028 NSD2O96028 1365 aa23.6■■□□□ 1.37
PDZD3-206ENST00000527028 MVPQ14764 893 aaKnown RBP23.6■■□□□ 1.37
PDZD3-206ENST00000527028 NEUROD2Q15784 382 aa23.59■■□□□ 1.37
PDZD3-206ENST00000527028 PUS7Q96PZ0 661 aaKnown RBP23.59■■□□□ 1.37
PDZD3-206ENST00000527028 NOS1P29475 1434 aa23.58■■□□□ 1.37
PDZD3-206ENST00000527028 RRP7AQ9Y3A4 280 aaKnown RBP23.58■■□□□ 1.37
PDZD3-206ENST00000527028 ZKSCAN2Q63HK3 967 aa23.55■■□□□ 1.36
PDZD3-206ENST00000527028 TNNQ9UQP3 1299 aa23.55■■□□□ 1.36
PDZD3-206ENST00000527028 C14orf93Q9H972 538 aaKnown RBP23.55■■□□□ 1.36
PDZD3-206ENST00000527028 MTHFSP49914 203 aa23.54■■□□□ 1.36
PDZD3-206ENST00000527028 SLC12A5Q9H2X9 1139 aa23.54■■□□□ 1.36
PDZD3-206ENST00000527028 KIDINS220Q9ULH0 1771 aa23.52■■□□□ 1.36
PDZD3-206ENST00000527028 HDAC1Q13547 482 aaPredicted RBP23.52■■□□□ 1.36
PDZD3-206ENST00000527028 DZIP1LQ8IYY4 767 aaKnown RBP23.52■■□□□ 1.36
PDZD3-206ENST00000527028 BCL2L13Q9BXK5 485 aa23.52■■□□□ 1.35
PDZD3-206ENST00000527028 FSD2A1L4K1 749 aa23.51■■□□□ 1.35
PDZD3-206ENST00000527028 MCM4P33991 863 aa23.51■■□□□ 1.35
PDZD3-206ENST00000527028 ANKRD36BQ8N2N9 1353 aa23.51■■□□□ 1.35
PDZD3-206ENST00000527028 TNNT2P45379 298 aaPredicted RBP23.5■■□□□ 1.35
PDZD3-206ENST00000527028 FTSJ3Q8IY81 847 aaKnown RBP23.5■■□□□ 1.35
PDZD3-206ENST00000527028 CHMP5Q9NZZ3 219 aa23.5■■□□□ 1.35
PDZD3-206ENST00000527028 C22orf23Q9BZE7 217 aa23.5■■□□□ 1.35
PDZD3-206ENST00000527028 RPGRIP1LQ68CZ1 1315 aa23.49■■□□□ 1.35
PDZD3-206ENST00000527028 TRAK1Q9UPV9 953 aa23.49■■□□□ 1.35
PDZD3-206ENST00000527028 GOLGA6L3A6NEY3 463 aa23.48■■□□□ 1.35
PDZD3-206ENST00000527028 DDX19BQ9UMR2 479 aa23.47■■□□□ 1.35
PDZD3-206ENST00000527028 ARHGEF28Q8N1W1 1705 aaKnown RBP23.46■■□□□ 1.35
PDZD3-206ENST00000527028 GLI2P10070 1586 aa23.46■■□□□ 1.35
PDZD3-206ENST00000527028 TULP4Q9NRJ4 1543 aa23.45■■□□□ 1.34
PDZD3-206ENST00000527028 U2AF1L5P0DN76 240 aaPredicted RBP23.44■■□□□ 1.34
PDZD3-206ENST00000527028 U2AF1Q01081 240 aaKnown RBP eCLIP23.44■■□□□ 1.34
PDZD3-206ENST00000527028 SMC5Q8IY18 1101 aa23.44■■□□□ 1.34
PDZD3-206ENST00000527028 UBE2Q2Q8WVN8 375 aa23.44■■□□□ 1.34
PDZD3-206ENST00000527028 EVC2Q86UK5 1308 aa23.43■■□□□ 1.34
PDZD3-206ENST00000527028 ABCC11Q96J66 1382 aa23.43■■□□□ 1.34
PDZD3-206ENST00000527028 RRAGDQ9NQL2 400 aaPredicted RBP23.43■■□□□ 1.34
PDZD3-206ENST00000527028 NCOA3Q9Y6Q9 1424 aa23.43■■□□□ 1.34
PDZD3-206ENST00000527028 IL16Q14005 1332 aa23.43■■□□□ 1.34
PDZD3-206ENST00000527028 EIF5BO60841 1220 aaKnown RBP23.43■■□□□ 1.34
PDZD3-206ENST00000527028 NPATQ14207 1427 aa23.43■■□□□ 1.34
PDZD3-206ENST00000527028 XRCC6P12956 609 aaKnown RBP eCLIP23.42■■□□□ 1.34
PDZD3-206ENST00000527028 ISY1Q9ULR0 285 aaKnown RBP23.42■■□□□ 1.34
PDZD3-206ENST00000527028 TRIM27P14373 513 aa23.41■■□□□ 1.34
PDZD3-206ENST00000527028 SMC4Q9NTJ3 1288 aa23.41■■□□□ 1.34
PDZD3-206ENST00000527028 ATF7IPQ6VMQ6 1270 aa23.4■■□□□ 1.34
PDZD3-206ENST00000527028 COL3A1P02461 1466 aaPredicted RBP23.4■■□□□ 1.34
PDZD3-206ENST00000527028 DDX11L8A8MPP1 907 aa23.4■■□□□ 1.34
PDZD3-206ENST00000527028 MFAP1P55081 439 aaKnown RBP23.4■■□□□ 1.34
PDZD3-206ENST00000527028 CD109Q6YHK3 1445 aa23.4■■□□□ 1.34
PDZD3-206ENST00000527028 HECW2Q9P2P5 1572 aa23.39■■□□□ 1.34
PDZD3-206ENST00000527028 ANKRD26Q9UPS8 1709 aa23.39■■□□□ 1.34
PDZD3-206ENST00000527028 HSCBQ8IWL3 235 aa23.39■■□□□ 1.33
PDZD3-206ENST00000527028 PLEKHF1Q96S99 279 aa23.39■■□□□ 1.33
PDZD3-206ENST00000527028 TRAK2O60296 914 aa23.38■■□□□ 1.33
PDZD3-206ENST00000527028 RBM25P49756 843 aaKnown RBP23.37■■□□□ 1.33
PDZD3-206ENST00000527028 EXOSC9Q06265 439 aaKnown RBP23.37■■□□□ 1.33
PDZD3-206ENST00000527028 MRE11P49959 708 aa23.37■■□□□ 1.33
PDZD3-206ENST00000527028 SNX21Q969T3 373 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms