RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 NEFMP07197 916 aa15.15■□□□□ 0.02
LINC01001-201ENST00000526704 MLH3Q9UHC1 1453 aa15.15■□□□□ 0.02
LINC01001-201ENST00000526704 USP35Q9P2H5 1018 aa15.15■□□□□ 0.02
LINC01001-201ENST00000526704 TRAK1Q9UPV9 953 aa15.15■□□□□ 0.02
LINC01001-201ENST00000526704 NINLQ9Y2I6 1382 aa15.14■□□□□ 0.01
LINC01001-201ENST00000526704 PPM1GO15355 546 aaPredicted RBP15.14■□□□□ 0.01
LINC01001-201ENST00000526704 WWC1Q8IX03 1113 aa15.14■□□□□ 0.01
LINC01001-201ENST00000526704 C14orf93Q9H972 538 aaKnown RBP15.14■□□□□ 0.01
LINC01001-201ENST00000526704 CHGAP10645 457 aaKnown RBP15.14■□□□□ 0.01
LINC01001-201ENST00000526704 TULP4Q9NRJ4 1543 aa15.13■□□□□ 0.01
LINC01001-201ENST00000526704 RGS3P49796 1198 aa15.13■□□□□ 0.01
LINC01001-201ENST00000526704 NEXMIFQ5QGS0 1516 aa15.13■□□□□ 0.01
LINC01001-201ENST00000526704 MORC1Q86VD1 984 aa15.12■□□□□ 0.01
LINC01001-201ENST00000526704 SLC12A5Q9H2X9 1139 aa15.12■□□□□ 0.01
LINC01001-201ENST00000526704 PDE3AQ14432 1141 aa15.11■□□□□ 0.01
LINC01001-201ENST00000526704 MYO5BQ9ULV0 1848 aa15.11■□□□□ 0.01
LINC01001-201ENST00000526704 CGNL1Q0VF96 1302 aa15.11■□□□□ 0.01
LINC01001-201ENST00000526704 ADGRB2O60241 1585 aa15.1■□□□□ 0.01
LINC01001-201ENST00000526704 IGHDP01880 384 aa15.1■□□□□ 0.01
LINC01001-201ENST00000526704 TMEM132EQ6IEE7 984 aa15.1■□□□□ 0.01
LINC01001-201ENST00000526704 CD109Q6YHK3 1445 aa15.1■□□□□ 0.01
LINC01001-201ENST00000526704 TNNT2P45379 298 aaPredicted RBP15.1■□□□□ 0.01
LINC01001-201ENST00000526704 RUNDC1Q96C34 613 aa15.09■□□□□ 0.01
LINC01001-201ENST00000526704 RPGRIP1LQ68CZ1 1315 aa15.09■□□□□ 0.01
LINC01001-201ENST00000526704 PHF23Q9BUL5 403 aaPredicted RBP15.09■□□□□ 0.01
LINC01001-201ENST00000526704 SLC4A3P48751 1232 aa15.08■□□□□ 0
LINC01001-201ENST00000526704 GGT6Q6P531 493 aa15.08■□□□□ 0
LINC01001-201ENST00000526704 PANK1Q8TE04 598 aa15.08■□□□□ 0
LINC01001-201ENST00000526704 DIP2CQ9Y2E4 1556 aa15.08■□□□□ 0
LINC01001-201ENST00000526704 ANKRD26Q9UPS8 1709 aa15.08■□□□□ 0
LINC01001-201ENST00000526704 CLUAP1Q96AJ1 413 aa15.08■□□□□ 0
LINC01001-201ENST00000526704 RRP7AQ9Y3A4 280 aaKnown RBP15.08■□□□□ 0
LINC01001-201ENST00000526704 TCP11L2Q8N4U5 519 aa15.07■□□□□ 0
LINC01001-201ENST00000526704 COG6Q9Y2V7 657 aa15.07■□□□□ 0
LINC01001-201ENST00000526704 CANXP27824 592 aaKnown RBP15.06■□□□□ 0
LINC01001-201ENST00000526704 NEUROD2Q15784 382 aa15.06■□□□□ 0
LINC01001-201ENST00000526704 ANKRD36BQ8N2N9 1353 aa15.06■□□□□ 0
LINC01001-201ENST00000526704 RARSP54136 660 aaKnown RBP15.05■□□□□ 0
LINC01001-201ENST00000526704 NSD2O96028 1365 aa15.05■□□□□ -0
LINC01001-201ENST00000526704 RICTORQ6R327 1708 aa15.05■□□□□ -0
LINC01001-201ENST00000526704 MTHFSP49914 203 aa15.05■□□□□ -0
LINC01001-201ENST00000526704 WDR63Q8IWG1 891 aa15.04■□□□□ -0
LINC01001-201ENST00000526704 CCDC27Q2M243 656 aa15.03■□□□□ -0
LINC01001-201ENST00000526704 PUS7Q96PZ0 661 aaKnown RBP15.03■□□□□ -0
LINC01001-201ENST00000526704 CLTCQ00610 1675 aaKnown RBP15.03■□□□□ -0
LINC01001-201ENST00000526704 NFKBIBQ15653 356 aa15.03■□□□□ -0
LINC01001-201ENST00000526704 FRAT1Q92837 279 aaPredicted RBP15.03■□□□□ -0
LINC01001-201ENST00000526704 EVC2Q86UK5 1308 aa15.03■□□□□ -0
LINC01001-201ENST00000526704 NLRP1Q9C000 1473 aa15.03■□□□□ -0
LINC01001-201ENST00000526704 USP19O94966 1318 aa15.02■□□□□ -0
LINC01001-201ENST00000526704 MAPK8IP3Q9UPT6 1336 aa15.02■□□□□ -0
LINC01001-201ENST00000526704 DAXXQ9UER7 740 aaPredicted RBP15.02■□□□□ -0
LINC01001-201ENST00000526704 PREX1Q8TCU6 1659 aa15.02□□□□□ -0.01
LINC01001-201ENST00000526704 CFAP53Q96M91 514 aa15.02□□□□□ -0.01
LINC01001-201ENST00000526704 TNNQ9UQP3 1299 aa15.02□□□□□ -0.01
LINC01001-201ENST00000526704 NEO1Q92859 1461 aa15.01□□□□□ -0.01
LINC01001-201ENST00000526704 RLBP1P12271 317 aa15.01□□□□□ -0.01
LINC01001-201ENST00000526704 NUTM2DQ5VT03 806 aaPredicted RBP15.01□□□□□ -0.01
LINC01001-201ENST00000526704 NPM1P06748 294 aaKnown RBP eCLIP15.01□□□□□ -0.01
LINC01001-201ENST00000526704 COL3A1P02461 1466 aaPredicted RBP15.01□□□□□ -0.01
LINC01001-201ENST00000526704 ARHGAP31Q2M1Z3 1444 aa15□□□□□ -0.01
LINC01001-201ENST00000526704 TMEM131LA2VDJ0 1609 aa15□□□□□ -0.01
LINC01001-201ENST00000526704 KIF20BQ96Q89 1820 aa14.99□□□□□ -0.01
LINC01001-201ENST00000526704 A0A1W2PP64 1363 aa14.99□□□□□ -0.01
LINC01001-201ENST00000526704 ABCC11Q96J66 1382 aa14.99□□□□□ -0.01
LINC01001-201ENST00000526704 VGFO15240 615 aaPredicted RBP14.99□□□□□ -0.01
LINC01001-201ENST00000526704 NCBP3Q53F19 620 aaKnown RBP14.99□□□□□ -0.01
LINC01001-201ENST00000526704 CABP2Q9NPB3 220 aa14.99□□□□□ -0.01
LINC01001-201ENST00000526704 ZFYVE9O95405 1425 aa14.98□□□□□ -0.01
LINC01001-201ENST00000526704 AAMPQ13685 434 aa14.98□□□□□ -0.01
LINC01001-201ENST00000526704 BCL2L13Q9BXK5 485 aa14.98□□□□□ -0.01
LINC01001-201ENST00000526704 PTPRMP28827 1452 aa14.98□□□□□ -0.01
LINC01001-201ENST00000526704 PCDHB15Q9Y5E8 787 aa14.98□□□□□ -0.01
LINC01001-201ENST00000526704 SEC24BO95487 1268 aa14.97□□□□□ -0.01
LINC01001-201ENST00000526704 PMFBP1Q8TBY8 1022 aa14.97□□□□□ -0.01
LINC01001-201ENST00000526704 RAPGEF3O95398 923 aa14.96□□□□□ -0.01
LINC01001-201ENST00000526704 U2AF1L5P0DN76 240 aaPredicted RBP14.96□□□□□ -0.01
LINC01001-201ENST00000526704 U2AF1Q01081 240 aaKnown RBP eCLIP14.96□□□□□ -0.01
LINC01001-201ENST00000526704 MYH16Q9H6N6 1097 aa14.96□□□□□ -0.01
LINC01001-201ENST00000526704 ZMYM3Q14202 1370 aa14.96□□□□□ -0.01
LINC01001-201ENST00000526704 ANO8Q9HCE9 1232 aaPredicted RBP14.96□□□□□ -0.01
LINC01001-201ENST00000526704 CD163L1Q9NR16 1453 aa14.95□□□□□ -0.02
LINC01001-201ENST00000526704 SAFB2Q14151 953 aaKnown RBP eCLIP14.95□□□□□ -0.02
LINC01001-201ENST00000526704 GSE1Q14687 1217 aa14.94□□□□□ -0.02
LINC01001-201ENST00000526704 MED14O60244 1454 aa14.94□□□□□ -0.02
LINC01001-201ENST00000526704 IDI1Q13907 227 aa14.94□□□□□ -0.02
LINC01001-201ENST00000526704 IL27Q8NEV9 243 aa14.93□□□□□ -0.02
LINC01001-201ENST00000526704 PLEKHF1Q96S99 279 aa14.93□□□□□ -0.02
LINC01001-201ENST00000526704 PDZRN3Q9UPQ7 1066 aa14.92□□□□□ -0.02
LINC01001-201ENST00000526704 YEATS2Q9ULM3 1422 aa14.92□□□□□ -0.02
LINC01001-201ENST00000526704 MVPQ14764 893 aaKnown RBP14.92□□□□□ -0.02
LINC01001-201ENST00000526704 FRAT2O75474 233 aaPredicted RBP14.91□□□□□ -0.02
LINC01001-201ENST00000526704 TSR2Q969E8 191 aaKnown RBP14.91□□□□□ -0.02
LINC01001-201ENST00000526704 GGNBP2Q9H3C7 697 aa14.91□□□□□ -0.02
LINC01001-201ENST00000526704 STK26Q9P289 416 aa14.91□□□□□ -0.02
LINC01001-201ENST00000526704 SRPK2P78362 688 aaKnown RBP14.9□□□□□ -0.02
LINC01001-201ENST00000526704 ATAD2Q6PL18 1390 aa14.9□□□□□ -0.02
LINC01001-201ENST00000526704 YTHDC2Q9H6S0 1430 aaKnown RBP14.9□□□□□ -0.02
LINC01001-201ENST00000526704 CDC42BPGQ6DT37 1551 aa14.9□□□□□ -0.02
LINC01001-201ENST00000526704 CT47B1P0C2W7 299 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms