RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 IQGAP3Q86VI3 1631 aa21.25■□□□□ 0.99
SSRP1-203ENST00000526696 SLIT2O94813 1529 aa21.24■□□□□ 0.99
SSRP1-203ENST00000526696 SF3B2Q13435 895 aaKnown RBP21.23■□□□□ 0.99
SSRP1-203ENST00000526696 UNC5CLQ8IV45 518 aa21.23■□□□□ 0.99
SSRP1-203ENST00000526696 PXDNQ92626 1479 aa21.23■□□□□ 0.99
SSRP1-203ENST00000526696 SEPT12Q8IYM1 358 aa21.21■□□□□ 0.99
SSRP1-203ENST00000526696 ROBO2Q9HCK4 1378 aa21.21■□□□□ 0.99
SSRP1-203ENST00000526696 XPCQ01831 940 aaPredicted RBP21.19■□□□□ 0.98
SSRP1-203ENST00000526696 NPHP3Q7Z494 1330 aa21.16■□□□□ 0.98
SSRP1-203ENST00000526696 NEXMIFQ5QGS0 1516 aa21.15■□□□□ 0.98
SSRP1-203ENST00000526696 YY1P25490 414 aa21.15■□□□□ 0.98
SSRP1-203ENST00000526696 ZNF326Q5BKZ1 582 aaKnown RBP21.14■□□□□ 0.97
SSRP1-203ENST00000526696 FOXO3O43524 673 aa21.13■□□□□ 0.97
SSRP1-203ENST00000526696 ONECUT3O60422 494 aaPredicted RBP21.13■□□□□ 0.97
SSRP1-203ENST00000526696 KRT27Q7Z3Y8 459 aa21.13■□□□□ 0.97
SSRP1-203ENST00000526696 BAG6P46379 1132 aa21.12■□□□□ 0.97
SSRP1-203ENST00000526696 R3HDM1Q15032 1099 aaKnown RBP21.12■□□□□ 0.97
SSRP1-203ENST00000526696 ESCO1Q5FWF5 840 aa21.12■□□□□ 0.97
SSRP1-203ENST00000526696 USP32Q8NFA0 1604 aa21.11■□□□□ 0.97
SSRP1-203ENST00000526696 EN1Q05925 392 aaPredicted RBP21.1■□□□□ 0.97
SSRP1-203ENST00000526696 VPS72Q15906 364 aa21.1■□□□□ 0.97
SSRP1-203ENST00000526696 PRAG1Q86YV5 1406 aa21.1■□□□□ 0.97
SSRP1-203ENST00000526696 FAM50AQ14320 339 aaKnown RBP21.08■□□□□ 0.97
SSRP1-203ENST00000526696 NUP155O75694 1391 aa21.07■□□□□ 0.96
SSRP1-203ENST00000526696 CDC42BPGQ6DT37 1551 aa21.06■□□□□ 0.96
SSRP1-203ENST00000526696 PLCH1Q4KWH8 1693 aa21.05■□□□□ 0.96
SSRP1-203ENST00000526696 HFM1A2PYH4 1435 aa21.05■□□□□ 0.96
SSRP1-203ENST00000526696 SPATA31A3Q5VYP0 1347 aa21.04■□□□□ 0.96
SSRP1-203ENST00000526696 CLTCL1P53675 1640 aa21.04■□□□□ 0.96
SSRP1-203ENST00000526696 RGPD1P0DJD0 1748 aa21.03■□□□□ 0.96
SSRP1-203ENST00000526696 NWD2Q9ULI1 1742 aa21.03■□□□□ 0.96
SSRP1-203ENST00000526696 LOC105371045A0A1W2PR82 267 aa21.02■□□□□ 0.96
SSRP1-203ENST00000526696 CCDC9Q9Y3X0 531 aaKnown RBP21.01■□□□□ 0.95
SSRP1-203ENST00000526696 NUTM2FA1L443 756 aa21■□□□□ 0.95
SSRP1-203ENST00000526696 FAM182BQ5T319 152 aa21■□□□□ 0.95
SSRP1-203ENST00000526696 CABLES1Q8TDN4 633 aa21■□□□□ 0.95
SSRP1-203ENST00000526696 DISP2A7MBM2 1401 aa21■□□□□ 0.95
SSRP1-203ENST00000526696 TNS1Q9HBL0 1735 aaKnown RBP21■□□□□ 0.95
SSRP1-203ENST00000526696 LRPPRCP42704 1394 aaKnown RBP20.99■□□□□ 0.95
SSRP1-203ENST00000526696 EZH2Q15910 746 aaKnown RBP20.98■□□□□ 0.95
SSRP1-203ENST00000526696 NAIPQ13075 1403 aa20.97■□□□□ 0.95
SSRP1-203ENST00000526696 APLP2Q06481 763 aa20.97■□□□□ 0.95
SSRP1-203ENST00000526696 ABCA3Q99758 1704 aa20.96■□□□□ 0.95
SSRP1-203ENST00000526696 FAM98CQ17RN3 349 aaKnown RBP20.96■□□□□ 0.95
SSRP1-203ENST00000526696 ROCK1Q13464 1354 aa20.96■□□□□ 0.95
SSRP1-203ENST00000526696 NRAPQ86VF7 1730 aa20.95■□□□□ 0.94
SSRP1-203ENST00000526696 KIF1BO60333 1816 aa20.95■□□□□ 0.94
SSRP1-203ENST00000526696 A0A0G2JS52 829 aa20.95■□□□□ 0.94
SSRP1-203ENST00000526696 MYT1Q01538 1121 aa20.95■□□□□ 0.94
SSRP1-203ENST00000526696 FAM83GA6ND36 823 aa20.93■□□□□ 0.94
SSRP1-203ENST00000526696 PLEKHG5O94827 1062 aa20.93■□□□□ 0.94
SSRP1-203ENST00000526696 KRT28Q7Z3Y7 464 aa20.93■□□□□ 0.94
SSRP1-203ENST00000526696 CAMKK2Q96RR4 588 aa20.93■□□□□ 0.94
SSRP1-203ENST00000526696 CCDC144AA2RUR9 1427 aa20.93■□□□□ 0.94
SSRP1-203ENST00000526696 VGFO15240 615 aaPredicted RBP20.91■□□□□ 0.94
SSRP1-203ENST00000526696 KIF1AQ12756 1690 aa20.91■□□□□ 0.94
SSRP1-203ENST00000526696 TNS3Q68CZ2 1445 aa20.91■□□□□ 0.94
SSRP1-203ENST00000526696 FMN2Q9NZ56 1722 aa20.9■□□□□ 0.94
SSRP1-203ENST00000526696 HAP1P54257 671 aaPredicted RBP20.9■□□□□ 0.94
SSRP1-203ENST00000526696 WAPLQ7Z5K2 1190 aa20.9■□□□□ 0.94
SSRP1-203ENST00000526696 UTRNP46939 3433 aa20.88■□□□□ 0.93
SSRP1-203ENST00000526696 RGPD8O14715 1765 aaPredicted RBP20.88■□□□□ 0.93
SSRP1-203ENST00000526696 IFFO2Q5TF58 517 aa20.88■□□□□ 0.93
SSRP1-203ENST00000526696 PLEKHH1Q9ULM0 1364 aa20.87■□□□□ 0.93
SSRP1-203ENST00000526696 THSD7AQ9UPZ6 1657 aa20.87■□□□□ 0.93
SSRP1-203ENST00000526696 CAMTA1Q9Y6Y1 1673 aa20.87■□□□□ 0.93
SSRP1-203ENST00000526696 PPLO60437 1756 aa20.86■□□□□ 0.93
SSRP1-203ENST00000526696 RREB1Q92766 1687 aa20.85■□□□□ 0.93
SSRP1-203ENST00000526696 NUP188Q5SRE5 1749 aa20.84■□□□□ 0.93
SSRP1-203ENST00000526696 BTG4Q9NY30 223 aa20.84■□□□□ 0.93
SSRP1-203ENST00000526696 TECPR2O15040 1411 aa20.84■□□□□ 0.93
SSRP1-203ENST00000526696 TRIM37O94972 964 aa20.83■□□□□ 0.93
SSRP1-203ENST00000526696 SPATA31A5Q5VU36 1347 aa20.82■□□□□ 0.92
SSRP1-203ENST00000526696 SPATA31A7Q8IWB4 1347 aa20.82■□□□□ 0.92
SSRP1-203ENST00000526696 ADGRB2O60241 1585 aa20.82■□□□□ 0.92
SSRP1-203ENST00000526696 ZNF784Q8NCA9 323 aaPredicted RBP20.82■□□□□ 0.92
SSRP1-203ENST00000526696 STK26Q9P289 416 aa20.82■□□□□ 0.92
SSRP1-203ENST00000526696 SBNO1A3KN83 1393 aa20.82■□□□□ 0.92
SSRP1-203ENST00000526696 NINLQ9Y2I6 1382 aa20.8■□□□□ 0.92
SSRP1-203ENST00000526696 RPGRIP1LQ68CZ1 1315 aa20.79■□□□□ 0.92
SSRP1-203ENST00000526696 SENP3-EIF4A1A0A087X0R7 540 aa20.79■□□□□ 0.92
SSRP1-203ENST00000526696 PSME1Q06323 249 aa20.79■□□□□ 0.92
SSRP1-203ENST00000526696 LMOD2Q6P5Q4 547 aa20.79■□□□□ 0.92
SSRP1-203ENST00000526696 PHF8Q9UPP1 1060 aa20.79■□□□□ 0.92
SSRP1-203ENST00000526696 PARD3Q8TEW0 1356 aa20.79■□□□□ 0.92
SSRP1-203ENST00000526696 COL14A1Q05707 1796 aaKnown RBP20.78■□□□□ 0.92
SSRP1-203ENST00000526696 ARHGEF10O15013 1369 aa20.78■□□□□ 0.92
SSRP1-203ENST00000526696 APBA3O96018 575 aa20.78■□□□□ 0.92
SSRP1-203ENST00000526696 NRXN1Q9ULB1 1477 aa20.77■□□□□ 0.92
SSRP1-203ENST00000526696 SPON1Q9HCB6 807 aa20.77■□□□□ 0.92
SSRP1-203ENST00000526696 PPP1R1BQ9UD71 204 aaPredicted RBP20.77■□□□□ 0.92
SSRP1-203ENST00000526696 KNDC1Q76NI1 1749 aa20.77■□□□□ 0.92
SSRP1-203ENST00000526696 IFT172Q9UG01 1749 aa20.77■□□□□ 0.92
SSRP1-203ENST00000526696 KCNQ2O43526 872 aa20.76■□□□□ 0.91
SSRP1-203ENST00000526696 ADGRF5Q8IZF2 1346 aa20.76■□□□□ 0.91
SSRP1-203ENST00000526696 ABCC11Q96J66 1382 aa20.75■□□□□ 0.91
SSRP1-203ENST00000526696 FAM196AQ6ZSG2 479 aa20.75■□□□□ 0.91
SSRP1-203ENST00000526696 DCAF8L1A6NGE4 600 aa20.74■□□□□ 0.91
SSRP1-203ENST00000526696 ITGAEP38570 1179 aa20.74■□□□□ 0.91
SSRP1-203ENST00000526696 TMEM132EQ6IEE7 984 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms