RNA–Protein interactions for RNA: ENST00000526493.1

UBASH3B-204, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 3

Gene UBASH3B, Length 1,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-204ENST00000526493 SIRT1Q96EB6 747 aa17.89■□□□□ 0.45
UBASH3B-204ENST00000526493 TBX22Q9Y458 520 aa17.89■□□□□ 0.45
UBASH3B-204ENST00000526493 XRN1Q8IZH2 1706 aaKnown RBP17.89■□□□□ 0.45
UBASH3B-204ENST00000526493 PTPRUQ92729 1446 aa17.89■□□□□ 0.45
UBASH3B-204ENST00000526493 WAPLQ7Z5K2 1190 aa17.88■□□□□ 0.45
UBASH3B-204ENST00000526493 SLC26A8Q96RN1 970 aa17.88■□□□□ 0.45
UBASH3B-204ENST00000526493 CHD2O14647 1828 aaKnown RBP17.87■□□□□ 0.45
UBASH3B-204ENST00000526493 MINK1Q8N4C8 1332 aaPredicted RBP17.87■□□□□ 0.45
UBASH3B-204ENST00000526493 YTHDC1Q96MU7 727 aaKnown RBP17.86■□□□□ 0.45
UBASH3B-204ENST00000526493 KTN1Q86UP2 1357 aaKnown RBP17.86■□□□□ 0.45
UBASH3B-204ENST00000526493 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.86■□□□□ 0.45
UBASH3B-204ENST00000526493 ANKLE2Q86XL3 938 aa17.85■□□□□ 0.45
UBASH3B-204ENST00000526493 PARD3Q8TEW0 1356 aa17.84■□□□□ 0.45
UBASH3B-204ENST00000526493 ROBO2Q9HCK4 1378 aa17.84■□□□□ 0.45
UBASH3B-204ENST00000526493 CNGB1Q14028 1251 aaPredicted RBP17.83■□□□□ 0.44
UBASH3B-204ENST00000526493 CCDC184Q52MB2 194 aa17.83■□□□□ 0.44
UBASH3B-204ENST00000526493 CABP2Q9NPB3 220 aa17.83■□□□□ 0.44
UBASH3B-204ENST00000526493 ADGRB2O60241 1585 aa17.83■□□□□ 0.44
UBASH3B-204ENST00000526493 KDM4FA0A1W2PPD8 638 aa17.82■□□□□ 0.44
UBASH3B-204ENST00000526493 RALBP1Q15311 655 aa17.82■□□□□ 0.44
UBASH3B-204ENST00000526493 USP32Q8NFA0 1604 aa17.82■□□□□ 0.44
UBASH3B-204ENST00000526493 PIK3R4Q99570 1358 aa17.81■□□□□ 0.44
UBASH3B-204ENST00000526493 AMER1Q5JTC6 1135 aaPredicted RBP17.81■□□□□ 0.44
UBASH3B-204ENST00000526493 CDK19Q9BWU1 502 aa17.81■□□□□ 0.44
UBASH3B-204ENST00000526493 CARD14Q9BXL6 1004 aa17.81■□□□□ 0.44
UBASH3B-204ENST00000526493 SLC12A5Q9H2X9 1139 aa17.81■□□□□ 0.44
UBASH3B-204ENST00000526493 PTCH1Q13635 1447 aa17.81■□□□□ 0.44
UBASH3B-204ENST00000526493 ATAD2Q6PL18 1390 aa17.8■□□□□ 0.44
UBASH3B-204ENST00000526493 NPC1L1Q9UHC9 1359 aa17.8■□□□□ 0.44
UBASH3B-204ENST00000526493 SRPK2P78362 688 aaKnown RBP17.8■□□□□ 0.44
UBASH3B-204ENST00000526493 KNSTRNQ9Y448 316 aa17.8■□□□□ 0.44
UBASH3B-204ENST00000526493 NINLQ9Y2I6 1382 aa17.79■□□□□ 0.44
UBASH3B-204ENST00000526493 TMC1Q8TDI8 760 aa17.79■□□□□ 0.44
UBASH3B-204ENST00000526493 AMOTL2Q9Y2J4 779 aa17.79■□□□□ 0.44
UBASH3B-204ENST00000526493 NPHP4O75161 1426 aaPredicted RBP17.79■□□□□ 0.44
UBASH3B-204ENST00000526493 CC2D1BQ5T0F9 858 aaKnown RBP17.78■□□□□ 0.44
UBASH3B-204ENST00000526493 MYBBP1AQ9BQG0 1328 aaKnown RBP17.77■□□□□ 0.44
UBASH3B-204ENST00000526493 ANKRD36BQ8N2N9 1353 aa17.77■□□□□ 0.43
UBASH3B-204ENST00000526493 NSD3Q9BZ95 1437 aa17.76■□□□□ 0.43
UBASH3B-204ENST00000526493 WASLO00401 505 aaPredicted RBP17.76■□□□□ 0.43
UBASH3B-204ENST00000526493 MRS2Q9HD23 443 aa17.76■□□□□ 0.43
UBASH3B-204ENST00000526493 CD163L1Q9NR16 1453 aa17.75■□□□□ 0.43
UBASH3B-204ENST00000526493 TOPAZ1Q8N9V7 1692 aa17.75■□□□□ 0.43
UBASH3B-204ENST00000526493 NCKAP5LQ9HCH0 1330 aa17.74■□□□□ 0.43
UBASH3B-204ENST00000526493 AKAP12Q02952 1782 aa17.74■□□□□ 0.43
UBASH3B-204ENST00000526493 ITSN1Q15811 1721 aa17.74■□□□□ 0.43
UBASH3B-204ENST00000526493 ANKRD26Q9UPS8 1709 aa17.74■□□□□ 0.43
UBASH3B-204ENST00000526493 BRD4O60885 1362 aaPredicted RBP17.74■□□□□ 0.43
UBASH3B-204ENST00000526493 RGPD8O14715 1765 aaPredicted RBP17.73■□□□□ 0.43
UBASH3B-204ENST00000526493 KIF20BQ96Q89 1820 aa17.72■□□□□ 0.43
UBASH3B-204ENST00000526493 NWD1Q149M9 1564 aa17.72■□□□□ 0.43
UBASH3B-204ENST00000526493 A0A1W2PP64 1363 aa17.72■□□□□ 0.43
UBASH3B-204ENST00000526493 CENPBP07199 599 aaPredicted RBP17.72■□□□□ 0.43
UBASH3B-204ENST00000526493 MON2Q7Z3U7 1717 aa17.72■□□□□ 0.43
UBASH3B-204ENST00000526493 NALCNQ8IZF0 1738 aa17.72■□□□□ 0.43
UBASH3B-204ENST00000526493 ATP7BP35670 1465 aa17.71■□□□□ 0.43
UBASH3B-204ENST00000526493 KCNA6P17658 529 aa17.71■□□□□ 0.43
UBASH3B-204ENST00000526493 NLRP13Q86W25 1043 aa17.71■□□□□ 0.43
UBASH3B-204ENST00000526493 FMN2Q9NZ56 1722 aa17.69■□□□□ 0.42
UBASH3B-204ENST00000526493 LMTK3Q96Q04 1460 aa17.69■□□□□ 0.42
UBASH3B-204ENST00000526493 STRCQ7RTU9 1775 aa17.69■□□□□ 0.42
UBASH3B-204ENST00000526493 NUDT16Q96DE0 195 aaKnown RBP17.69■□□□□ 0.42
UBASH3B-204ENST00000526493 CABP1Q9NZU7 370 aa17.69■□□□□ 0.42
UBASH3B-204ENST00000526493 CDC42BPGQ6DT37 1551 aa17.69■□□□□ 0.42
UBASH3B-204ENST00000526493 PPIP5K1Q6PFW1 1433 aa17.68■□□□□ 0.42
UBASH3B-204ENST00000526493 TERF2IPQ9NYB0 399 aa17.68■□□□□ 0.42
UBASH3B-204ENST00000526493 PRR36Q9H6K5 1346 aa17.68■□□□□ 0.42
UBASH3B-204ENST00000526493 PPP2R1AP30153 589 aa17.67■□□□□ 0.42
UBASH3B-204ENST00000526493 STRCP1A6NGW2 1772 aa17.66■□□□□ 0.42
UBASH3B-204ENST00000526493 PNISRQ8TF01 805 aaKnown RBP17.66■□□□□ 0.42
UBASH3B-204ENST00000526493 CGNL1Q0VF96 1302 aa17.66■□□□□ 0.42
UBASH3B-204ENST00000526493 CPSF1Q10570 1443 aaKnown RBP17.65■□□□□ 0.42
UBASH3B-204ENST00000526493 HDGFL2Q7Z4V5 671 aaPredicted RBP17.65■□□□□ 0.42
UBASH3B-204ENST00000526493 FAM9BQ8IZU0 186 aa17.65■□□□□ 0.42
UBASH3B-204ENST00000526493 CCDC61Q9Y6R9 512 aa17.65■□□□□ 0.42
UBASH3B-204ENST00000526493 NSD2O96028 1365 aa17.65■□□□□ 0.42
UBASH3B-204ENST00000526493 HSPA2P54652 639 aa17.64■□□□□ 0.41
UBASH3B-204ENST00000526493 NRKQ7Z2Y5 1582 aa17.62■□□□□ 0.41
UBASH3B-204ENST00000526493 NKTRP30414 1462 aaKnown RBP17.61■□□□□ 0.41
UBASH3B-204ENST00000526493 MORC1Q86VD1 984 aa17.6■□□□□ 0.41
UBASH3B-204ENST00000526493 EDC4Q6P2E9 1401 aaKnown RBP17.6■□□□□ 0.41
UBASH3B-204ENST00000526493 ANKARQ7Z5J8 1434 aa17.59■□□□□ 0.41
UBASH3B-204ENST00000526493 ADGRL3Q9HAR2 1447 aa17.59■□□□□ 0.41
UBASH3B-204ENST00000526493 PLEKHG3A1L390 1219 aa17.59■□□□□ 0.41
UBASH3B-204ENST00000526493 FYB1O15117 783 aa17.58■□□□□ 0.4
UBASH3B-204ENST00000526493 HNRNPUQ00839 825 aaKnown RBP eCLIP17.58■□□□□ 0.4
UBASH3B-204ENST00000526493 NUTM2FA1L443 756 aa17.57■□□□□ 0.4
UBASH3B-204ENST00000526493 SHPRHQ149N8 1683 aa17.56■□□□□ 0.4
UBASH3B-204ENST00000526493 ACEP12821 1306 aa17.55■□□□□ 0.4
UBASH3B-204ENST00000526493 RBM33Q96EV2 1170 aaKnown RBP17.55■□□□□ 0.4
UBASH3B-204ENST00000526493 ZNF692Q9BU19 519 aaPredicted RBP17.55■□□□□ 0.4
UBASH3B-204ENST00000526493 GGNBP2Q9H3C7 697 aa17.55■□□□□ 0.4
UBASH3B-204ENST00000526493 MAP2P11137 1827 aaKnown RBP17.55■□□□□ 0.4
UBASH3B-204ENST00000526493 XIRP1Q702N8 1843 aaKnown RBP17.55■□□□□ 0.4
UBASH3B-204ENST00000526493 POLR3AO14802 1390 aaPredicted RBP17.53■□□□□ 0.4
UBASH3B-204ENST00000526493 INSRP06213 1382 aa17.53■□□□□ 0.4
UBASH3B-204ENST00000526493 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.53■□□□□ 0.4
UBASH3B-204ENST00000526493 USP6P35125 1406 aa17.53■□□□□ 0.4
UBASH3B-204ENST00000526493 TNNT2P45379 298 aaPredicted RBP17.52■□□□□ 0.4
UBASH3B-204ENST00000526493 PROSER2Q86WR7 435 aaPredicted RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms