RNA–Protein interactions for RNA: ENST00000526396.3

TRIM49D2-201, Transcript of tripartite motif containing 49D2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM49D2, Length 1,411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D2-201ENST00000526396 MKRN4PQ13434 485 aaPredicted RBP12.66□□□□□ -0.38
TRIM49D2-201ENST00000526396 TIMELESSQ9UNS1 1208 aa12.66□□□□□ -0.38
TRIM49D2-201ENST00000526396 LRRC7Q96NW7 1537 aa12.66□□□□□ -0.38
TRIM49D2-201ENST00000526396 NKTRP30414 1462 aaKnown RBP12.65□□□□□ -0.38
TRIM49D2-201ENST00000526396 ROCK2O75116 1388 aaKnown RBP12.65□□□□□ -0.38
TRIM49D2-201ENST00000526396 PLEKHH1Q9ULM0 1364 aa12.65□□□□□ -0.38
TRIM49D2-201ENST00000526396 CPS1P31327 1500 aa12.65□□□□□ -0.38
TRIM49D2-201ENST00000526396 XIRP1Q702N8 1843 aaKnown RBP12.65□□□□□ -0.39
TRIM49D2-201ENST00000526396 KNDC1Q76NI1 1749 aa12.64□□□□□ -0.39
TRIM49D2-201ENST00000526396 TRAK1Q9UPV9 953 aa12.64□□□□□ -0.39
TRIM49D2-201ENST00000526396 TECPR2O15040 1411 aa12.64□□□□□ -0.39
TRIM49D2-201ENST00000526396 WAPLQ7Z5K2 1190 aa12.63□□□□□ -0.39
TRIM49D2-201ENST00000526396 PTCH1Q13635 1447 aa12.63□□□□□ -0.39
TRIM49D2-201ENST00000526396 TMEM94Q12767 1356 aa12.63□□□□□ -0.39
TRIM49D2-201ENST00000526396 GPRASP1Q5JY77 1395 aa12.63□□□□□ -0.39
TRIM49D2-201ENST00000526396 ABCC11Q96J66 1382 aa12.63□□□□□ -0.39
TRIM49D2-201ENST00000526396 DSG3P32926 999 aa12.62□□□□□ -0.39
TRIM49D2-201ENST00000526396 ARHGEF28Q8N1W1 1705 aaKnown RBP12.62□□□□□ -0.39
TRIM49D2-201ENST00000526396 PROSER2Q86WR7 435 aaPredicted RBP12.62□□□□□ -0.39
TRIM49D2-201ENST00000526396 ZBTB12Q9Y330 459 aaPredicted RBP12.62□□□□□ -0.39
TRIM49D2-201ENST00000526396 NALCNQ8IZF0 1738 aa12.61□□□□□ -0.39
TRIM49D2-201ENST00000526396 SAFB2Q14151 953 aaKnown RBP eCLIP12.61□□□□□ -0.39
TRIM49D2-201ENST00000526396 PRAM1Q96QH2 718 aa12.61□□□□□ -0.39
TRIM49D2-201ENST00000526396 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.6□□□□□ -0.39
TRIM49D2-201ENST00000526396 DLC1Q96QB1 1528 aa12.6□□□□□ -0.39
TRIM49D2-201ENST00000526396 CARD11Q9BXL7 1154 aa12.6□□□□□ -0.39
TRIM49D2-201ENST00000526396 FAM135BQ49AJ0 1406 aa12.58□□□□□ -0.39
TRIM49D2-201ENST00000526396 SPDYE4A6NLX3 237 aa12.58□□□□□ -0.4
TRIM49D2-201ENST00000526396 CERKQ8TCT0 537 aa12.57□□□□□ -0.4
TRIM49D2-201ENST00000526396 HIRIP3Q9BW71 556 aaPredicted RBP12.56□□□□□ -0.4
TRIM49D2-201ENST00000526396 ADGRL3Q9HAR2 1447 aa12.56□□□□□ -0.4
TRIM49D2-201ENST00000526396 QRICH2Q9H0J4 1663 aa12.56□□□□□ -0.4
TRIM49D2-201ENST00000526396 C14orf37Q86TY3 774 aa12.55□□□□□ -0.4
TRIM49D2-201ENST00000526396 POGKQ9P215 609 aa12.55□□□□□ -0.4
TRIM49D2-201ENST00000526396 MINK1Q8N4C8 1332 aaPredicted RBP12.55□□□□□ -0.4
TRIM49D2-201ENST00000526396 USP47Q96K76 1375 aa12.55□□□□□ -0.4
TRIM49D2-201ENST00000526396 CENPJQ9HC77 1338 aaPredicted RBP12.54□□□□□ -0.4
TRIM49D2-201ENST00000526396 SIRT1Q96EB6 747 aa12.54□□□□□ -0.4
TRIM49D2-201ENST00000526396 ADGRB2O60241 1585 aa12.52□□□□□ -0.4
TRIM49D2-201ENST00000526396 CDC42BPGQ6DT37 1551 aa12.52□□□□□ -0.4
TRIM49D2-201ENST00000526396 TULP4Q9NRJ4 1543 aa12.52□□□□□ -0.4
TRIM49D2-201ENST00000526396 NCOA3Q9Y6Q9 1424 aa12.52□□□□□ -0.41
TRIM49D2-201ENST00000526396 MSH6P52701 1360 aa12.52□□□□□ -0.41
TRIM49D2-201ENST00000526396 ST20-MTHFSA0A0A6YYL1 179 aa12.52□□□□□ -0.41
TRIM49D2-201ENST00000526396 IQSEC2Q5JU85 1478 aa12.51□□□□□ -0.41
TRIM49D2-201ENST00000526396 EIF3AQ14152 1382 aaKnown RBP12.51□□□□□ -0.41
TRIM49D2-201ENST00000526396 NUTM2FA1L443 756 aa12.51□□□□□ -0.41
TRIM49D2-201ENST00000526396 C19orf44Q9H6X5 657 aa12.51□□□□□ -0.41
TRIM49D2-201ENST00000526396 HSPA5P11021 654 aaKnown RBP12.5□□□□□ -0.41
TRIM49D2-201ENST00000526396 TESK2Q96S53 571 aa12.5□□□□□ -0.41
TRIM49D2-201ENST00000526396 DCCP43146 1447 aa12.5□□□□□ -0.41
TRIM49D2-201ENST00000526396 MST1RQ04912 1400 aa12.5□□□□□ -0.41
TRIM49D2-201ENST00000526396 FMN2Q9NZ56 1722 aa12.49□□□□□ -0.41
TRIM49D2-201ENST00000526396 USP32Q8NFA0 1604 aa12.49□□□□□ -0.41
TRIM49D2-201ENST00000526396 UBAP1LF5GYI3 381 aa12.48□□□□□ -0.41
TRIM49D2-201ENST00000526396 DISP3Q9P2K9 1392 aa12.48□□□□□ -0.41
TRIM49D2-201ENST00000526396 PRR36Q9H6K5 1346 aa12.48□□□□□ -0.41
TRIM49D2-201ENST00000526396 ATF3P18847 181 aa12.47□□□□□ -0.41
TRIM49D2-201ENST00000526396 WASLO00401 505 aaPredicted RBP12.46□□□□□ -0.41
TRIM49D2-201ENST00000526396 PIP4K2BP78356 416 aa12.46□□□□□ -0.41
TRIM49D2-201ENST00000526396 CABP2Q9NPB3 220 aa12.46□□□□□ -0.41
TRIM49D2-201ENST00000526396 ATP7BP35670 1465 aa12.46□□□□□ -0.41
TRIM49D2-201ENST00000526396 C1orf167Q5SNV9 1468 aa12.46□□□□□ -0.41
TRIM49D2-201ENST00000526396 ZEB1P37275 1124 aaPredicted RBP12.45□□□□□ -0.42
TRIM49D2-201ENST00000526396 EIF4G2P78344 907 aaKnown RBP eCLIP12.45□□□□□ -0.42
TRIM49D2-201ENST00000526396 CADPS2Q86UW7 1296 aa12.45□□□□□ -0.42
TRIM49D2-201ENST00000526396 CDK19Q9BWU1 502 aa12.45□□□□□ -0.42
TRIM49D2-201ENST00000526396 SLAIN2Q9P270 581 aa12.45□□□□□ -0.42
TRIM49D2-201ENST00000526396 SBNO2Q9Y2G9 1366 aa12.45□□□□□ -0.42
TRIM49D2-201ENST00000526396 RGPD8O14715 1765 aaPredicted RBP12.45□□□□□ -0.42
TRIM49D2-201ENST00000526396 ORAI2Q96SN7 254 aa12.45□□□□□ -0.42
TRIM49D2-201ENST00000526396 ROBO1Q9Y6N7 1651 aa12.44□□□□□ -0.42
TRIM49D2-201ENST00000526396 TOPAZ1Q8N9V7 1692 aa12.43□□□□□ -0.42
TRIM49D2-201ENST00000526396 C11orf95C9JLR9 678 aaPredicted RBP12.43□□□□□ -0.42
TRIM49D2-201ENST00000526396 SRPK2P78362 688 aaKnown RBP12.43□□□□□ -0.42
TRIM49D2-201ENST00000526396 BRINP3Q76B58 766 aa12.43□□□□□ -0.42
TRIM49D2-201ENST00000526396 DDX17Q92841 729 aaKnown RBP12.43□□□□□ -0.42
TRIM49D2-201ENST00000526396 TOM1O60784 492 aa12.42□□□□□ -0.42
TRIM49D2-201ENST00000526396 ANKARQ7Z5J8 1434 aa12.42□□□□□ -0.42
TRIM49D2-201ENST00000526396 EVC2Q86UK5 1308 aa12.42□□□□□ -0.42
TRIM49D2-201ENST00000526396 ESCO1Q5FWF5 840 aa12.41□□□□□ -0.42
TRIM49D2-201ENST00000526396 NUDT16Q96DE0 195 aaKnown RBP12.41□□□□□ -0.42
TRIM49D2-201ENST00000526396 PMFBP1Q8TBY8 1022 aa12.39□□□□□ -0.43
TRIM49D2-201ENST00000526396 PPIP5K1Q6PFW1 1433 aa12.38□□□□□ -0.43
TRIM49D2-201ENST00000526396 XPCQ01831 940 aaPredicted RBP12.38□□□□□ -0.43
TRIM49D2-201ENST00000526396 MYOM1P52179 1685 aa12.38□□□□□ -0.43
TRIM49D2-201ENST00000526396 TMF1P82094 1093 aa12.37□□□□□ -0.43
TRIM49D2-201ENST00000526396 PHF8Q9UPP1 1060 aa12.37□□□□□ -0.43
TRIM49D2-201ENST00000526396 ITSN1Q15811 1721 aa12.37□□□□□ -0.43
TRIM49D2-201ENST00000526396 NHSL1Q5SYE7 1610 aa12.37□□□□□ -0.43
TRIM49D2-201ENST00000526396 FOXO3O43524 673 aa12.37□□□□□ -0.43
TRIM49D2-201ENST00000526396 FBXO41Q8TF61 875 aa12.37□□□□□ -0.43
TRIM49D2-201ENST00000526396 POLR3GLQ9BT43 218 aa12.37□□□□□ -0.43
TRIM49D2-201ENST00000526396 CABP1Q9NZU7 370 aa12.37□□□□□ -0.43
TRIM49D2-201ENST00000526396 AHDC1Q5TGY3 1603 aaPredicted RBP12.36□□□□□ -0.43
TRIM49D2-201ENST00000526396 KIF1AQ12756 1690 aa12.36□□□□□ -0.43
TRIM49D2-201ENST00000526396 CD163L1Q9NR16 1453 aa12.36□□□□□ -0.43
TRIM49D2-201ENST00000526396 FBXO3Q9UK99 471 aa12.36□□□□□ -0.43
TRIM49D2-201ENST00000526396 CCDC61Q9Y6R9 512 aa12.36□□□□□ -0.43
TRIM49D2-201ENST00000526396 KIF7Q2M1P5 1343 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms