RNA–Protein interactions for RNA: ENST00000526308.2

PCDHB18P-202, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 3,197 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-202ENST00000526308 KDM5AP29375 1690 aaKnown RBP17.42■□□□□ 0.38
PCDHB18P-202ENST00000526308 POLR3AO14802 1390 aaPredicted RBP17.42■□□□□ 0.38
PCDHB18P-202ENST00000526308 AAMPQ13685 434 aa17.42■□□□□ 0.38
PCDHB18P-202ENST00000526308 MCM4P33991 863 aa17.42■□□□□ 0.38
PCDHB18P-202ENST00000526308 ZKSCAN2Q63HK3 967 aa17.41■□□□□ 0.38
PCDHB18P-202ENST00000526308 ITPRIPQ8IWB1 547 aa17.41■□□□□ 0.38
PCDHB18P-202ENST00000526308 WDR63Q8IWG1 891 aa17.41■□□□□ 0.38
PCDHB18P-202ENST00000526308 NAP1L5Q96NT1 182 aaPredicted RBP17.41■□□□□ 0.38
PCDHB18P-202ENST00000526308 SMC4Q9NTJ3 1288 aa17.41■□□□□ 0.38
PCDHB18P-202ENST00000526308 ERVK-7P63135 1459 aa17.4■□□□□ 0.38
PCDHB18P-202ENST00000526308 MVPQ14764 893 aaKnown RBP17.4■□□□□ 0.38
PCDHB18P-202ENST00000526308 DZIP1LQ8IYY4 767 aaKnown RBP17.4■□□□□ 0.38
PCDHB18P-202ENST00000526308 PLCH2O75038 1416 aa17.4■□□□□ 0.38
PCDHB18P-202ENST00000526308 HSCBQ8IWL3 235 aa17.4■□□□□ 0.38
PCDHB18P-202ENST00000526308 TSR2Q969E8 191 aaKnown RBP17.4■□□□□ 0.38
PCDHB18P-202ENST00000526308 XRCC6P12956 609 aaKnown RBP eCLIP17.39■□□□□ 0.37
PCDHB18P-202ENST00000526308 UBE2Q2Q8WVN8 375 aa17.39■□□□□ 0.37
PCDHB18P-202ENST00000526308 PANK2Q9BZ23 570 aa17.39■□□□□ 0.37
PCDHB18P-202ENST00000526308 TRPM2O94759 1503 aa17.39■□□□□ 0.37
PCDHB18P-202ENST00000526308 U2SURPO15042 1029 aaKnown RBP17.38■□□□□ 0.37
PCDHB18P-202ENST00000526308 CHMP5Q9NZZ3 219 aa17.38■□□□□ 0.37
PCDHB18P-202ENST00000526308 MYOM1P52179 1685 aa17.38■□□□□ 0.37
PCDHB18P-202ENST00000526308 NLRP1Q9C000 1473 aa17.38■□□□□ 0.37
PCDHB18P-202ENST00000526308 TRAK2O60296 914 aa17.38■□□□□ 0.37
PCDHB18P-202ENST00000526308 CLTCL1P53675 1640 aa17.37■□□□□ 0.37
PCDHB18P-202ENST00000526308 TMEM132EQ6IEE7 984 aa17.37■□□□□ 0.37
PCDHB18P-202ENST00000526308 PNNQ9H307 717 aaKnown RBP17.36■□□□□ 0.37
PCDHB18P-202ENST00000526308 SPHKAPQ2M3C7 1700 aa17.36■□□□□ 0.37
PCDHB18P-202ENST00000526308 PTPRTO14522 1441 aa17.35■□□□□ 0.37
PCDHB18P-202ENST00000526308 HSP90AA1P07900 732 aaKnown RBP17.34■□□□□ 0.37
PCDHB18P-202ENST00000526308 VIRMAQ69YN4 1812 aaKnown RBP17.34■□□□□ 0.37
PCDHB18P-202ENST00000526308 EXOSC9Q06265 439 aaKnown RBP17.34■□□□□ 0.37
PCDHB18P-202ENST00000526308 SAFB2Q14151 953 aaKnown RBP eCLIP17.33■□□□□ 0.37
PCDHB18P-202ENST00000526308 UGGT1Q9NYU2 1555 aa17.33■□□□□ 0.36
PCDHB18P-202ENST00000526308 NUTM2DQ5VT03 806 aaPredicted RBP17.32■□□□□ 0.36
PCDHB18P-202ENST00000526308 HSP90AB1P08238 724 aaKnown RBP17.31■□□□□ 0.36
PCDHB18P-202ENST00000526308 TRIM27P14373 513 aa17.31■□□□□ 0.36
PCDHB18P-202ENST00000526308 DDX19BQ9UMR2 479 aa17.31■□□□□ 0.36
PCDHB18P-202ENST00000526308 CEP152O94986 1710 aa17.31■□□□□ 0.36
PCDHB18P-202ENST00000526308 ABCC1P33527 1531 aa17.3■□□□□ 0.36
PCDHB18P-202ENST00000526308 FOXD4L1Q9NU39 408 aa17.3■□□□□ 0.36
PCDHB18P-202ENST00000526308 DDX11L8A8MPP1 907 aa17.29■□□□□ 0.36
PCDHB18P-202ENST00000526308 CCDC27Q2M243 656 aa17.29■□□□□ 0.36
PCDHB18P-202ENST00000526308 SSH1Q8WYL5 1049 aa17.29■□□□□ 0.36
PCDHB18P-202ENST00000526308 LNPKQ9C0E8 428 aa17.29■□□□□ 0.36
PCDHB18P-202ENST00000526308 MRE11P49959 708 aa17.29■□□□□ 0.36
PCDHB18P-202ENST00000526308 PHF23Q9BUL5 403 aaPredicted RBP17.29■□□□□ 0.36
PCDHB18P-202ENST00000526308 NOB1Q9ULX3 412 aaKnown RBP17.29■□□□□ 0.36
PCDHB18P-202ENST00000526308 TRIM44Q96DX7 344 aaPredicted RBP17.28■□□□□ 0.36
PCDHB18P-202ENST00000526308 NOS1P29475 1434 aa17.28■□□□□ 0.36
PCDHB18P-202ENST00000526308 FSD2A1L4K1 749 aa17.28■□□□□ 0.36
PCDHB18P-202ENST00000526308 ATF7IPQ6VMQ6 1270 aa17.28■□□□□ 0.36
PCDHB18P-202ENST00000526308 ZMYM3Q14202 1370 aa17.27■□□□□ 0.36
PCDHB18P-202ENST00000526308 TMEM57Q8N5G2 664 aa17.26■□□□□ 0.35
PCDHB18P-202ENST00000526308 GRPEL1Q9HAV7 217 aa17.26■□□□□ 0.35
PCDHB18P-202ENST00000526308 ERCC6L2Q5T890 1561 aa17.26■□□□□ 0.35
PCDHB18P-202ENST00000526308 CABP2Q9NPB3 220 aa17.26■□□□□ 0.35
PCDHB18P-202ENST00000526308 ABCA6Q8N139 1617 aa17.25■□□□□ 0.35
PCDHB18P-202ENST00000526308 RTEL1-TNFRSF6BF6WH68 1400 aa17.25■□□□□ 0.35
PCDHB18P-202ENST00000526308 HDAC1Q13547 482 aaPredicted RBP17.25■□□□□ 0.35
PCDHB18P-202ENST00000526308 MAP3K4Q9Y6R4 1608 aa17.24■□□□□ 0.35
PCDHB18P-202ENST00000526308 GGT6Q6P531 493 aa17.24■□□□□ 0.35
PCDHB18P-202ENST00000526308 GGNBP2Q9H3C7 697 aa17.24■□□□□ 0.35
PCDHB18P-202ENST00000526308 TMPOP42166 694 aaKnown RBP17.24■□□□□ 0.35
PCDHB18P-202ENST00000526308 EVC2Q86UK5 1308 aa17.23■□□□□ 0.35
PCDHB18P-202ENST00000526308 IPO8O15397 1037 aaKnown RBP17.23■□□□□ 0.35
PCDHB18P-202ENST00000526308 GBP4Q96PP9 640 aa17.23■□□□□ 0.35
PCDHB18P-202ENST00000526308 IQSEC2Q5JU85 1478 aa17.23■□□□□ 0.35
PCDHB18P-202ENST00000526308 ZFYVE16Q7Z3T8 1539 aa17.23■□□□□ 0.35
PCDHB18P-202ENST00000526308 ZNF518AQ6AHZ1 1483 aa17.23■□□□□ 0.35
PCDHB18P-202ENST00000526308 CLCN1P35523 988 aa17.23■□□□□ 0.35
PCDHB18P-202ENST00000526308 RIPK4P57078 832 aa17.23■□□□□ 0.35
PCDHB18P-202ENST00000526308 SRPK2P78362 688 aaKnown RBP17.23■□□□□ 0.35
PCDHB18P-202ENST00000526308 SBNO2Q9Y2G9 1366 aa17.23■□□□□ 0.35
PCDHB18P-202ENST00000526308 TET3O43151 1660 aa17.22■□□□□ 0.35
PCDHB18P-202ENST00000526308 CT47B1P0C2W7 299 aaPredicted RBP17.22■□□□□ 0.35
PCDHB18P-202ENST00000526308 MYOM2P54296 1465 aa17.22■□□□□ 0.35
PCDHB18P-202ENST00000526308 STK26Q9P289 416 aa17.22■□□□□ 0.35
PCDHB18P-202ENST00000526308 SHROOM2Q13796 1616 aa17.22■□□□□ 0.35
PCDHB18P-202ENST00000526308 TNPO1Q92973 898 aaKnown RBP17.22■□□□□ 0.35
PCDHB18P-202ENST00000526308 GLIPR1L2Q4G1C9 344 aa17.21■□□□□ 0.35
PCDHB18P-202ENST00000526308 ANKRD45Q5TZF3 282 aa17.21■□□□□ 0.35
PCDHB18P-202ENST00000526308 SMC5Q8IY18 1101 aa17.21■□□□□ 0.35
PCDHB18P-202ENST00000526308 C14orf93Q9H972 538 aaKnown RBP17.2■□□□□ 0.34
PCDHB18P-202ENST00000526308 KIAA1210Q9ULL0 1709 aa17.2■□□□□ 0.34
PCDHB18P-202ENST00000526308 SHPRHQ149N8 1683 aa17.19■□□□□ 0.34
PCDHB18P-202ENST00000526308 ESPNB1AK53 854 aa17.19■□□□□ 0.34
PCDHB18P-202ENST00000526308 CHD1LQ86WJ1 897 aa17.19■□□□□ 0.34
PCDHB18P-202ENST00000526308 KIF16BQ96L93 1317 aa17.18■□□□□ 0.34
PCDHB18P-202ENST00000526308 C1orf115Q9H7X2 142 aa17.18■□□□□ 0.34
PCDHB18P-202ENST00000526308 ATP7AQ04656 1500 aa17.18■□□□□ 0.34
PCDHB18P-202ENST00000526308 PLPPR3Q6T4P5 718 aa17.18■□□□□ 0.34
PCDHB18P-202ENST00000526308 ZBTB40Q9NUA8 1239 aa17.18■□□□□ 0.34
PCDHB18P-202ENST00000526308 TRIM35Q9UPQ4 493 aa17.18■□□□□ 0.34
PCDHB18P-202ENST00000526308 HSP90AA2PQ14568 343 aaPredicted RBP17.18■□□□□ 0.34
PCDHB18P-202ENST00000526308 FANCAO15360 1455 aa17.17■□□□□ 0.34
PCDHB18P-202ENST00000526308 NUCB1Q02818 461 aa17.17■□□□□ 0.34
PCDHB18P-202ENST00000526308 ZCCHC11Q5TAX3 1644 aaKnown RBP17.17■□□□□ 0.34
PCDHB18P-202ENST00000526308 CHD1O14646 1710 aa17.16■□□□□ 0.34
PCDHB18P-202ENST00000526308 KIF1BO60333 1816 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms