RNA–Protein interactions for RNA: ENST00000526131.1

AP004247.2-201, humanhuman

TSL 1 (best) BASIC

Gene AP004247.2, Length 1,890 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004247.2-201ENST00000526131 CENPJQ9HC77 1338 aaPredicted RBP15.63■□□□□ 0.09
AP004247.2-201ENST00000526131 EIF3AQ14152 1382 aaKnown RBP15.62■□□□□ 0.09
AP004247.2-201ENST00000526131 PTCH1Q13635 1447 aa15.62■□□□□ 0.09
AP004247.2-201ENST00000526131 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.62■□□□□ 0.09
AP004247.2-201ENST00000526131 TECPR2O15040 1411 aa15.61■□□□□ 0.09
AP004247.2-201ENST00000526131 HSPA5P11021 654 aaKnown RBP15.61■□□□□ 0.09
AP004247.2-201ENST00000526131 EIF4G2P78344 907 aaKnown RBP eCLIP15.61■□□□□ 0.09
AP004247.2-201ENST00000526131 DLC1Q96QB1 1528 aa15.6■□□□□ 0.09
AP004247.2-201ENST00000526131 POLR3GLQ9BT43 218 aa15.59■□□□□ 0.09
AP004247.2-201ENST00000526131 FAM135BQ49AJ0 1406 aa15.58■□□□□ 0.08
AP004247.2-201ENST00000526131 MSH6P52701 1360 aa15.57■□□□□ 0.08
AP004247.2-201ENST00000526131 SCAF1Q9H7N4 1312 aaKnown RBP15.56■□□□□ 0.08
AP004247.2-201ENST00000526131 ATF3P18847 181 aa15.55■□□□□ 0.08
AP004247.2-201ENST00000526131 CERKQ8TCT0 537 aa15.55■□□□□ 0.08
AP004247.2-201ENST00000526131 ADGRL3Q9HAR2 1447 aa15.55■□□□□ 0.08
AP004247.2-201ENST00000526131 SRPK2P78362 688 aaKnown RBP15.54■□□□□ 0.08
AP004247.2-201ENST00000526131 RGPD8O14715 1765 aaPredicted RBP15.54■□□□□ 0.08
AP004247.2-201ENST00000526131 C19orf44Q9H6X5 657 aa15.54■□□□□ 0.08
AP004247.2-201ENST00000526131 CABP2Q9NPB3 220 aa15.54■□□□□ 0.08
AP004247.2-201ENST00000526131 PIP4K2BP78356 416 aa15.53■□□□□ 0.08
AP004247.2-201ENST00000526131 SIRT1Q96EB6 747 aa15.52■□□□□ 0.08
AP004247.2-201ENST00000526131 CDK19Q9BWU1 502 aa15.52■□□□□ 0.08
AP004247.2-201ENST00000526131 TESK2Q96S53 571 aa15.52■□□□□ 0.07
AP004247.2-201ENST00000526131 TULP4Q9NRJ4 1543 aa15.52■□□□□ 0.07
AP004247.2-201ENST00000526131 DISP3Q9P2K9 1392 aa15.51■□□□□ 0.07
AP004247.2-201ENST00000526131 UBAP1LF5GYI3 381 aa15.51■□□□□ 0.07
AP004247.2-201ENST00000526131 WASLO00401 505 aaPredicted RBP15.5■□□□□ 0.07
AP004247.2-201ENST00000526131 EVC2Q86UK5 1308 aa15.5■□□□□ 0.07
AP004247.2-201ENST00000526131 TMF1P82094 1093 aa15.49■□□□□ 0.07
AP004247.2-201ENST00000526131 CDC42BPGQ6DT37 1551 aa15.49■□□□□ 0.07
AP004247.2-201ENST00000526131 CADPS2Q86UW7 1296 aa15.49■□□□□ 0.07
AP004247.2-201ENST00000526131 FMN2Q9NZ56 1722 aa15.49■□□□□ 0.07
AP004247.2-201ENST00000526131 ADGRB2O60241 1585 aa15.48■□□□□ 0.07
AP004247.2-201ENST00000526131 ESCO1Q5FWF5 840 aa15.48■□□□□ 0.07
AP004247.2-201ENST00000526131 C11orf95C9JLR9 678 aaPredicted RBP15.47■□□□□ 0.07
AP004247.2-201ENST00000526131 PPP4R3CPQ6ZMV5 832 aa15.47■□□□□ 0.07
AP004247.2-201ENST00000526131 PMFBP1Q8TBY8 1022 aa15.47■□□□□ 0.07
AP004247.2-201ENST00000526131 TMC1Q8TDI8 760 aa15.47■□□□□ 0.07
AP004247.2-201ENST00000526131 NCOA3Q9Y6Q9 1424 aa15.47■□□□□ 0.07
AP004247.2-201ENST00000526131 ORAI2Q96SN7 254 aa15.46■□□□□ 0.07
AP004247.2-201ENST00000526131 SLAIN2Q9P270 581 aa15.46■□□□□ 0.07
AP004247.2-201ENST00000526131 PRR36Q9H6K5 1346 aa15.46■□□□□ 0.07
AP004247.2-201ENST00000526131 USP32Q8NFA0 1604 aa15.46■□□□□ 0.06
AP004247.2-201ENST00000526131 TOM1O60784 492 aa15.45■□□□□ 0.06
AP004247.2-201ENST00000526131 DDX17Q92841 729 aaKnown RBP15.45■□□□□ 0.06
AP004247.2-201ENST00000526131 NUDT16Q96DE0 195 aaKnown RBP15.45■□□□□ 0.06
AP004247.2-201ENST00000526131 MST1RQ04912 1400 aa15.45■□□□□ 0.06
AP004247.2-201ENST00000526131 SBNO2Q9Y2G9 1366 aa15.44■□□□□ 0.06
AP004247.2-201ENST00000526131 XPCQ01831 940 aaPredicted RBP15.44■□□□□ 0.06
AP004247.2-201ENST00000526131 DCCP43146 1447 aa15.44■□□□□ 0.06
AP004247.2-201ENST00000526131 C1orf167Q5SNV9 1468 aa15.44■□□□□ 0.06
AP004247.2-201ENST00000526131 ATP7BP35670 1465 aa15.43■□□□□ 0.06
AP004247.2-201ENST00000526131 ROBO1Q9Y6N7 1651 aa15.42■□□□□ 0.06
AP004247.2-201ENST00000526131 PPIP5K1Q6PFW1 1433 aa15.42■□□□□ 0.06
AP004247.2-201ENST00000526131 CABP1Q9NZU7 370 aa15.42■□□□□ 0.06
AP004247.2-201ENST00000526131 ITSN1Q15811 1721 aa15.42■□□□□ 0.06
AP004247.2-201ENST00000526131 KIF7Q2M1P5 1343 aa15.41■□□□□ 0.06
AP004247.2-201ENST00000526131 PLEKHG5O94827 1062 aa15.41■□□□□ 0.06
AP004247.2-201ENST00000526131 FOXO3O43524 673 aa15.4■□□□□ 0.06
AP004247.2-201ENST00000526131 BRINP3Q76B58 766 aa15.4■□□□□ 0.06
AP004247.2-201ENST00000526131 SLC12A5Q9H2X9 1139 aa15.4■□□□□ 0.06
AP004247.2-201ENST00000526131 NGDNQ8NEJ9 315 aaKnown RBP15.4■□□□□ 0.06
AP004247.2-201ENST00000526131 CCDC61Q9Y6R9 512 aa15.4■□□□□ 0.06
AP004247.2-201ENST00000526131 IQSEC2Q5JU85 1478 aa15.39■□□□□ 0.05
AP004247.2-201ENST00000526131 WASHC2AQ641Q2 1341 aa15.39■□□□□ 0.05
AP004247.2-201ENST00000526131 TOPAZ1Q8N9V7 1692 aa15.39■□□□□ 0.05
AP004247.2-201ENST00000526131 CDCA8Q53HL2 280 aa15.39■□□□□ 0.05
AP004247.2-201ENST00000526131 PHF8Q9UPP1 1060 aa15.39■□□□□ 0.05
AP004247.2-201ENST00000526131 CNGB1Q14028 1251 aaPredicted RBP15.38■□□□□ 0.05
AP004247.2-201ENST00000526131 ATAD2Q6PL18 1390 aa15.38■□□□□ 0.05
AP004247.2-201ENST00000526131 SLC24A1O60721 1099 aa15.37■□□□□ 0.05
AP004247.2-201ENST00000526131 MAPK8IP2Q13387 824 aaPredicted RBP15.37■□□□□ 0.05
AP004247.2-201ENST00000526131 ANKARQ7Z5J8 1434 aa15.37■□□□□ 0.05
AP004247.2-201ENST00000526131 MYOM1P52179 1685 aa15.37■□□□□ 0.05
AP004247.2-201ENST00000526131 ACEP12821 1306 aa15.36■□□□□ 0.05
AP004247.2-201ENST00000526131 CCDC7Q96M83 1385 aa15.36■□□□□ 0.05
AP004247.2-201ENST00000526131 ZNF316A6NFI3 1004 aaPredicted RBP15.35■□□□□ 0.05
AP004247.2-201ENST00000526131 PAK3O75914 559 aaPredicted RBP15.35■□□□□ 0.05
AP004247.2-201ENST00000526131 PSME1Q06323 249 aa15.35■□□□□ 0.05
AP004247.2-201ENST00000526131 LMOD2Q6P5Q4 547 aa15.35■□□□□ 0.05
AP004247.2-201ENST00000526131 KIF1AQ12756 1690 aa15.34■□□□□ 0.05
AP004247.2-201ENST00000526131 PHLPP1O60346 1717 aa15.33■□□□□ 0.04
AP004247.2-201ENST00000526131 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.32■□□□□ 0.04
AP004247.2-201ENST00000526131 A0A1W2PP64 1363 aa15.32■□□□□ 0.04
AP004247.2-201ENST00000526131 DDX10Q13206 875 aaKnown RBP15.31■□□□□ 0.04
AP004247.2-201ENST00000526131 NUTM2GQ5VZR2 741 aa15.31■□□□□ 0.04
AP004247.2-201ENST00000526131 HDGFL2Q7Z4V5 671 aaPredicted RBP15.31■□□□□ 0.04
AP004247.2-201ENST00000526131 POTEDQ86YR6 584 aa15.31■□□□□ 0.04
AP004247.2-201ENST00000526131 KTN1Q86UP2 1357 aaKnown RBP15.31■□□□□ 0.04
AP004247.2-201ENST00000526131 AKAP12Q02952 1782 aa15.31■□□□□ 0.04
AP004247.2-201ENST00000526131 KRT28Q7Z3Y7 464 aa15.31■□□□□ 0.04
AP004247.2-201ENST00000526131 PANK3Q9H999 370 aa15.31■□□□□ 0.04
AP004247.2-201ENST00000526131 NPHP3Q7Z494 1330 aa15.31■□□□□ 0.04
AP004247.2-201ENST00000526131 PLEKHG3A1L390 1219 aa15.3■□□□□ 0.04
AP004247.2-201ENST00000526131 TERF2IPQ9NYB0 399 aa15.3■□□□□ 0.04
AP004247.2-201ENST00000526131 NHSL1Q5SYE7 1610 aa15.3■□□□□ 0.04
AP004247.2-201ENST00000526131 CD163L1Q9NR16 1453 aa15.29■□□□□ 0.04
AP004247.2-201ENST00000526131 HSPA1LP34931 641 aa15.29■□□□□ 0.04
AP004247.2-201ENST00000526131 PUS7Q96PZ0 661 aaKnown RBP15.28■□□□□ 0.04
AP004247.2-201ENST00000526131 MON2Q7Z3U7 1717 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms