RNA–Protein interactions for RNA: ENST00000525801.1

ROM1-202, Transcript of retinal outer segment membrane protein 1, humanhuman

TSL 3

Gene ROM1, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-202ENST00000525801 NHSL1Q5SYE7 1610 aa21.8■■□□□ 1.08
ROM1-202ENST00000525801 FOXO3O43524 673 aa21.78■■□□□ 1.08
ROM1-202ENST00000525801 MPHOSPH9Q99550 1183 aa21.78■■□□□ 1.08
ROM1-202ENST00000525801 PTCH1Q13635 1447 aa21.78■■□□□ 1.08
ROM1-202ENST00000525801 SOS2Q07890 1332 aaPredicted RBP21.76■■□□□ 1.07
ROM1-202ENST00000525801 CCDC144AA2RUR9 1427 aa21.75■■□□□ 1.07
ROM1-202ENST00000525801 RGS12O14924 1447 aa21.74■■□□□ 1.07
ROM1-202ENST00000525801 PLEKHH1Q9ULM0 1364 aa21.72■■□□□ 1.07
ROM1-202ENST00000525801 SAFB2Q14151 953 aaKnown RBP eCLIP21.71■■□□□ 1.07
ROM1-202ENST00000525801 TRPC5Q9UL62 973 aaPredicted RBP21.71■■□□□ 1.07
ROM1-202ENST00000525801 NPHP3Q7Z494 1330 aa21.71■■□□□ 1.07
ROM1-202ENST00000525801 CDK12Q9NYV4 1490 aaPredicted RBP21.68■■□□□ 1.06
ROM1-202ENST00000525801 PPLO60437 1756 aa21.68■■□□□ 1.06
ROM1-202ENST00000525801 LMOD2Q6P5Q4 547 aa21.66■■□□□ 1.06
ROM1-202ENST00000525801 LRPPRCP42704 1394 aaKnown RBP21.65■■□□□ 1.06
ROM1-202ENST00000525801 HAP1P54257 671 aaPredicted RBP21.65■■□□□ 1.06
ROM1-202ENST00000525801 CFAP70Q5T0N1 1121 aa21.65■■□□□ 1.06
ROM1-202ENST00000525801 ANKRD30BQ9BXX2 1392 aa21.64■■□□□ 1.06
ROM1-202ENST00000525801 FNBP4Q8N3X1 1017 aaPredicted RBP21.64■■□□□ 1.05
ROM1-202ENST00000525801 KRT28Q7Z3Y7 464 aa21.63■■□□□ 1.05
ROM1-202ENST00000525801 SPATA31E1Q6ZUB1 1445 aa21.63■■□□□ 1.05
ROM1-202ENST00000525801 CABLES1Q8TDN4 633 aa21.61■■□□□ 1.05
ROM1-202ENST00000525801 ATAD2Q6PL18 1390 aa21.61■■□□□ 1.05
ROM1-202ENST00000525801 ABCC11Q96J66 1382 aa21.6■■□□□ 1.05
ROM1-202ENST00000525801 PXDNQ92626 1479 aa21.59■■□□□ 1.05
ROM1-202ENST00000525801 PRAM1Q96QH2 718 aa21.59■■□□□ 1.05
ROM1-202ENST00000525801 YTHDC2Q9H6S0 1430 aaKnown RBP21.59■■□□□ 1.05
ROM1-202ENST00000525801 POGKQ9P215 609 aa21.59■■□□□ 1.05
ROM1-202ENST00000525801 KDM2AQ9Y2K7 1162 aa21.59■■□□□ 1.05
ROM1-202ENST00000525801 CDC42BPGQ6DT37 1551 aa21.58■■□□□ 1.05
ROM1-202ENST00000525801 PRAG1Q86YV5 1406 aa21.58■■□□□ 1.05
ROM1-202ENST00000525801 PMFBP1Q8TBY8 1022 aa21.58■■□□□ 1.05
ROM1-202ENST00000525801 CCDC9Q9Y3X0 531 aaKnown RBP21.58■■□□□ 1.05
ROM1-202ENST00000525801 ATRNO75882 1429 aa21.57■■□□□ 1.04
ROM1-202ENST00000525801 GJD4Q96KN9 370 aaPredicted RBP21.57■■□□□ 1.04
ROM1-202ENST00000525801 C14orf93Q9H972 538 aaKnown RBP21.57■■□□□ 1.04
ROM1-202ENST00000525801 PHF8Q9UPP1 1060 aa21.57■■□□□ 1.04
ROM1-202ENST00000525801 MYOM2P54296 1465 aa21.57■■□□□ 1.04
ROM1-202ENST00000525801 PSME1Q06323 249 aa21.56■■□□□ 1.04
ROM1-202ENST00000525801 HIRIP3Q9BW71 556 aaPredicted RBP21.56■■□□□ 1.04
ROM1-202ENST00000525801 DHX57Q6P158 1386 aaKnown RBP21.56■■□□□ 1.04
ROM1-202ENST00000525801 SPATA31A3Q5VYP0 1347 aa21.55■■□□□ 1.04
ROM1-202ENST00000525801 PIK3C2GO75747 1445 aa21.55■■□□□ 1.04
ROM1-202ENST00000525801 LAMC1P11047 1609 aa21.55■■□□□ 1.04
ROM1-202ENST00000525801 BCL9LQ86UU0 1499 aa21.54■■□□□ 1.04
ROM1-202ENST00000525801 TRAK1Q9UPV9 953 aa21.54■■□□□ 1.04
ROM1-202ENST00000525801 TECPR2O15040 1411 aa21.54■■□□□ 1.04
ROM1-202ENST00000525801 UNC5CLQ8IV45 518 aa21.52■■□□□ 1.04
ROM1-202ENST00000525801 A0A0G2JS52 829 aa21.51■■□□□ 1.03
ROM1-202ENST00000525801 MYT1Q01538 1121 aa21.51■■□□□ 1.03
ROM1-202ENST00000525801 COL22A1Q8NFW1 1626 aaPredicted RBP21.5■■□□□ 1.03
ROM1-202ENST00000525801 MINK1Q8N4C8 1332 aaPredicted RBP21.5■■□□□ 1.03
ROM1-202ENST00000525801 ZRANB1Q9UGI0 708 aa21.49■■□□□ 1.03
ROM1-202ENST00000525801 RAB3GAP2Q9H2M9 1393 aa21.48■■□□□ 1.03
ROM1-202ENST00000525801 DCAF11Q8TEB1 546 aa21.48■■□□□ 1.03
ROM1-202ENST00000525801 IFT172Q9UG01 1749 aa21.47■■□□□ 1.03
ROM1-202ENST00000525801 SIRT1Q96EB6 747 aa21.47■■□□□ 1.03
ROM1-202ENST00000525801 SEPT12Q8IYM1 358 aa21.46■■□□□ 1.03
ROM1-202ENST00000525801 FMN2Q9NZ56 1722 aa21.45■■□□□ 1.02
ROM1-202ENST00000525801 RALGAPBQ86X10 1494 aa21.45■■□□□ 1.02
ROM1-202ENST00000525801 PAK3O75914 559 aaPredicted RBP21.44■■□□□ 1.02
ROM1-202ENST00000525801 TNS3Q68CZ2 1445 aa21.44■■□□□ 1.02
ROM1-202ENST00000525801 DEFB132Q7Z7B7 95 aa21.43■■□□□ 1.02
ROM1-202ENST00000525801 FAM83GA6ND36 823 aa21.42■■□□□ 1.02
ROM1-202ENST00000525801 KNDC1Q76NI1 1749 aa21.42■■□□□ 1.02
ROM1-202ENST00000525801 SRCAPQ6ZRS2 3230 aa21.41■■□□□ 1.02
ROM1-202ENST00000525801 SLIT2O94813 1529 aa21.4■■□□□ 1.02
ROM1-202ENST00000525801 SF3B2Q13435 895 aaKnown RBP21.4■■□□□ 1.02
ROM1-202ENST00000525801 NGDNQ8NEJ9 315 aaKnown RBP21.4■■□□□ 1.02
ROM1-202ENST00000525801 RGPD8O14715 1765 aaPredicted RBP21.4■■□□□ 1.02
ROM1-202ENST00000525801 KIF1AQ12756 1690 aa21.4■■□□□ 1.02
ROM1-202ENST00000525801 VPS72Q15906 364 aa21.39■■□□□ 1.01
ROM1-202ENST00000525801 CCDC125Q86Z20 511 aa21.39■■□□□ 1.01
ROM1-202ENST00000525801 ACIN1Q9UKV3 1341 aaKnown RBP21.38■■□□□ 1.01
ROM1-202ENST00000525801 BTG4Q9NY30 223 aa21.38■■□□□ 1.01
ROM1-202ENST00000525801 EP400Q96L91 3159 aa21.38■■□□□ 1.01
ROM1-202ENST00000525801 NRXN1Q9ULB1 1477 aa21.38■■□□□ 1.01
ROM1-202ENST00000525801 MARF1Q9Y4F3 1742 aaKnown RBP21.38■■□□□ 1.01
ROM1-202ENST00000525801 SBNO1A3KN83 1393 aa21.37■■□□□ 1.01
ROM1-202ENST00000525801 GLI3P10071 1580 aa21.37■■□□□ 1.01
ROM1-202ENST00000525801 FAM98CQ17RN3 349 aaKnown RBP21.37■■□□□ 1.01
ROM1-202ENST00000525801 ARHGEF10O15013 1369 aa21.36■■□□□ 1.01
ROM1-202ENST00000525801 GPRASP1Q5JY77 1395 aa21.36■■□□□ 1.01
ROM1-202ENST00000525801 PRR36Q9H6K5 1346 aa21.36■■□□□ 1.01
ROM1-202ENST00000525801 KRT27Q7Z3Y8 459 aa21.36■■□□□ 1.01
ROM1-202ENST00000525801 USP32Q8NFA0 1604 aa21.36■■□□□ 1.01
ROM1-202ENST00000525801 WASLO00401 505 aaPredicted RBP21.35■■□□□ 1.01
ROM1-202ENST00000525801 FAM182BQ5T319 152 aa21.35■■□□□ 1.01
ROM1-202ENST00000525801 NUTM2GQ5VZR2 741 aa21.35■■□□□ 1.01
ROM1-202ENST00000525801 BLMP54132 1417 aaPredicted RBP21.31■■□□□ 1
ROM1-202ENST00000525801 ANKARQ7Z5J8 1434 aa21.3■■□□□ 1
ROM1-202ENST00000525801 CHRNA2Q15822 529 aa21.29■■□□□ 1
ROM1-202ENST00000525801 NUDT16Q96DE0 195 aaKnown RBP21.29■■□□□ 1
ROM1-202ENST00000525801 PRDM11Q9NQV5 511 aa21.29■■□□□ 1
ROM1-202ENST00000525801 STRN4Q9NRL3 753 aa21.29■■□□□ 1
ROM1-202ENST00000525801 DLC1Q96QB1 1528 aa21.29■■□□□ 1
ROM1-202ENST00000525801 ADGRB1O14514 1584 aa21.28■■□□□ 1
ROM1-202ENST00000525801 PSDA5PKW4 1024 aaPredicted RBP21.28■■□□□ 1
ROM1-202ENST00000525801 ZC3H6P61129 1189 aaKnown RBP21.27■■□□□ 1
ROM1-202ENST00000525801 CDK19Q9BWU1 502 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms