RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 AMOTL2Q9Y2J4 779 aa9.31□□□□□ -0.92
CD44-214ENST00000525211 ROBO2Q9HCK4 1378 aa9.31□□□□□ -0.92
CD44-214ENST00000525211 TRAK1Q9UPV9 953 aa9.3□□□□□ -0.92
CD44-214ENST00000525211 LTBP4Q8N2S1 1624 aa9.3□□□□□ -0.92
CD44-214ENST00000525211 RALGAPBQ86X10 1494 aa9.29□□□□□ -0.92
CD44-214ENST00000525211 LRPPRCP42704 1394 aaKnown RBP9.29□□□□□ -0.92
CD44-214ENST00000525211 TIMELESSQ9UNS1 1208 aa9.29□□□□□ -0.92
CD44-214ENST00000525211 YTHDC2Q9H6S0 1430 aaKnown RBP9.29□□□□□ -0.92
CD44-214ENST00000525211 CHD2O14647 1828 aaKnown RBP9.28□□□□□ -0.92
CD44-214ENST00000525211 XRN1Q8IZH2 1706 aaKnown RBP9.28□□□□□ -0.92
CD44-214ENST00000525211 GPRASP1Q5JY77 1395 aa9.28□□□□□ -0.92
CD44-214ENST00000525211 STAC3Q96MF2 364 aa9.28□□□□□ -0.92
CD44-214ENST00000525211 ZNF692Q9BU19 519 aaPredicted RBP9.28□□□□□ -0.92
CD44-214ENST00000525211 DIP2AQ14689 1571 aa9.28□□□□□ -0.92
CD44-214ENST00000525211 NWD1Q149M9 1564 aa9.28□□□□□ -0.92
CD44-214ENST00000525211 ROCK2O75116 1388 aaKnown RBP9.27□□□□□ -0.93
CD44-214ENST00000525211 VASPP50552 380 aaPredicted RBP9.27□□□□□ -0.93
CD44-214ENST00000525211 SAFB2Q14151 953 aaKnown RBP eCLIP9.27□□□□□ -0.93
CD44-214ENST00000525211 HIRIP3Q9BW71 556 aaPredicted RBP9.27□□□□□ -0.93
CD44-214ENST00000525211 LRRC7Q96NW7 1537 aa9.26□□□□□ -0.93
CD44-214ENST00000525211 ABCC11Q96J66 1382 aa9.26□□□□□ -0.93
CD44-214ENST00000525211 KIAA1210Q9ULL0 1709 aa9.26□□□□□ -0.93
CD44-214ENST00000525211 PRAM1Q96QH2 718 aa9.26□□□□□ -0.93
CD44-214ENST00000525211 CARD11Q9BXL7 1154 aa9.26□□□□□ -0.93
CD44-214ENST00000525211 PIK3R4Q99570 1358 aa9.25□□□□□ -0.93
CD44-214ENST00000525211 TECPR2O15040 1411 aa9.25□□□□□ -0.93
CD44-214ENST00000525211 LAMC1P11047 1609 aa9.25□□□□□ -0.93
CD44-214ENST00000525211 SPDYE2BA6NHP3 402 aa9.25□□□□□ -0.93
CD44-214ENST00000525211 SPDYE6P0CI01 402 aa9.25□□□□□ -0.93
CD44-214ENST00000525211 SPDYE2Q495Y8 402 aa9.25□□□□□ -0.93
CD44-214ENST00000525211 PROSER2Q86WR7 435 aaPredicted RBP9.25□□□□□ -0.93
CD44-214ENST00000525211 XIRP1Q702N8 1843 aaKnown RBP9.25□□□□□ -0.93
CD44-214ENST00000525211 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.25□□□□□ -0.93
CD44-214ENST00000525211 TMEM94Q12767 1356 aa9.24□□□□□ -0.93
CD44-214ENST00000525211 HSPA5P11021 654 aaKnown RBP9.24□□□□□ -0.93
CD44-214ENST00000525211 CPS1P31327 1500 aa9.24□□□□□ -0.93
CD44-214ENST00000525211 ARHGEF28Q8N1W1 1705 aaKnown RBP9.23□□□□□ -0.93
CD44-214ENST00000525211 SSUH2Q9Y2M2 353 aa9.23□□□□□ -0.93
CD44-214ENST00000525211 MINK1Q8N4C8 1332 aaPredicted RBP9.23□□□□□ -0.93
CD44-214ENST00000525211 KNDC1Q76NI1 1749 aa9.22□□□□□ -0.93
CD44-214ENST00000525211 ST20-MTHFSA0A0A6YYL1 179 aa9.22□□□□□ -0.93
CD44-214ENST00000525211 C11orf95C9JLR9 678 aaPredicted RBP9.22□□□□□ -0.93
CD44-214ENST00000525211 TESK2Q96S53 571 aa9.22□□□□□ -0.93
CD44-214ENST00000525211 USP47Q96K76 1375 aa9.22□□□□□ -0.93
CD44-214ENST00000525211 PTCH1Q13635 1447 aa9.22□□□□□ -0.93
CD44-214ENST00000525211 DLC1Q96QB1 1528 aa9.21□□□□□ -0.93
CD44-214ENST00000525211 NALCNQ8IZF0 1738 aa9.21□□□□□ -0.94
CD44-214ENST00000525211 DISP3Q9P2K9 1392 aa9.21□□□□□ -0.94
CD44-214ENST00000525211 FAM135BQ49AJ0 1406 aa9.21□□□□□ -0.94
CD44-214ENST00000525211 NKTRP30414 1462 aaKnown RBP9.21□□□□□ -0.94
CD44-214ENST00000525211 NUTM2FA1L443 756 aa9.2□□□□□ -0.94
CD44-214ENST00000525211 SIRT1Q96EB6 747 aa9.2□□□□□ -0.94
CD44-214ENST00000525211 IFNLR1Q8IU57 520 aaPredicted RBP9.19□□□□□ -0.94
CD44-214ENST00000525211 CERKQ8TCT0 537 aa9.19□□□□□ -0.94
CD44-214ENST00000525211 POGKQ9P215 609 aa9.19□□□□□ -0.94
CD44-214ENST00000525211 PRR36Q9H6K5 1346 aa9.19□□□□□ -0.94
CD44-214ENST00000525211 CENPJQ9HC77 1338 aaPredicted RBP9.19□□□□□ -0.94
CD44-214ENST00000525211 TULP4Q9NRJ4 1543 aa9.19□□□□□ -0.94
CD44-214ENST00000525211 ADGRL3Q9HAR2 1447 aa9.18□□□□□ -0.94
CD44-214ENST00000525211 QRICH2Q9H0J4 1663 aa9.17□□□□□ -0.94
CD44-214ENST00000525211 CABP2Q9NPB3 220 aa9.17□□□□□ -0.94
CD44-214ENST00000525211 ZEB1P37275 1124 aaPredicted RBP9.16□□□□□ -0.94
CD44-214ENST00000525211 EIF4G2P78344 907 aaKnown RBP eCLIP9.16□□□□□ -0.94
CD44-214ENST00000525211 DDX17Q92841 729 aaKnown RBP9.16□□□□□ -0.94
CD44-214ENST00000525211 CDK19Q9BWU1 502 aa9.16□□□□□ -0.94
CD44-214ENST00000525211 WASLO00401 505 aaPredicted RBP9.15□□□□□ -0.94
CD44-214ENST00000525211 C14orf37Q86TY3 774 aa9.15□□□□□ -0.94
CD44-214ENST00000525211 ORAI2Q96SN7 254 aa9.15□□□□□ -0.94
CD44-214ENST00000525211 C19orf44Q9H6X5 657 aa9.15□□□□□ -0.94
CD44-214ENST00000525211 USP32Q8NFA0 1604 aa9.15□□□□□ -0.94
CD44-214ENST00000525211 MST1RQ04912 1400 aa9.14□□□□□ -0.95
CD44-214ENST00000525211 ADGRB2O60241 1585 aa9.14□□□□□ -0.95
CD44-214ENST00000525211 NCOA3Q9Y6Q9 1424 aa9.14□□□□□ -0.95
CD44-214ENST00000525211 MSH6P52701 1360 aa9.13□□□□□ -0.95
CD44-214ENST00000525211 RGPD8O14715 1765 aaPredicted RBP9.13□□□□□ -0.95
CD44-214ENST00000525211 FMN2Q9NZ56 1722 aa9.13□□□□□ -0.95
CD44-214ENST00000525211 C1orf167Q5SNV9 1468 aa9.13□□□□□ -0.95
CD44-214ENST00000525211 CDC42BPGQ6DT37 1551 aa9.12□□□□□ -0.95
CD44-214ENST00000525211 NUDT16Q96DE0 195 aaKnown RBP9.12□□□□□ -0.95
CD44-214ENST00000525211 ATP7BP35670 1465 aa9.12□□□□□ -0.95
CD44-214ENST00000525211 EIF3AQ14152 1382 aaKnown RBP9.12□□□□□ -0.95
CD44-214ENST00000525211 SBNO2Q9Y2G9 1366 aa9.12□□□□□ -0.95
CD44-214ENST00000525211 UBAP1LF5GYI3 381 aa9.11□□□□□ -0.95
CD44-214ENST00000525211 PIP4K2BP78356 416 aa9.11□□□□□ -0.95
CD44-214ENST00000525211 BRINP3Q76B58 766 aa9.11□□□□□ -0.95
CD44-214ENST00000525211 PMFBP1Q8TBY8 1022 aa9.11□□□□□ -0.95
CD44-214ENST00000525211 SLC12A5Q9H2X9 1139 aa9.11□□□□□ -0.95
CD44-214ENST00000525211 SLAIN2Q9P270 581 aa9.11□□□□□ -0.95
CD44-214ENST00000525211 KIF7Q2M1P5 1343 aa9.1□□□□□ -0.95
CD44-214ENST00000525211 WASHC2AQ641Q2 1341 aa9.1□□□□□ -0.95
CD44-214ENST00000525211 ATF3P18847 181 aa9.1□□□□□ -0.95
CD44-214ENST00000525211 SRPK2P78362 688 aaKnown RBP9.1□□□□□ -0.95
CD44-214ENST00000525211 XPCQ01831 940 aaPredicted RBP9.1□□□□□ -0.95
CD44-214ENST00000525211 CABP1Q9NZU7 370 aa9.1□□□□□ -0.95
CD44-214ENST00000525211 DCCP43146 1447 aa9.1□□□□□ -0.95
CD44-214ENST00000525211 CD163L1Q9NR16 1453 aa9.09□□□□□ -0.95
CD44-214ENST00000525211 EVC2Q86UK5 1308 aa9.09□□□□□ -0.95
CD44-214ENST00000525211 ESCO1Q5FWF5 840 aa9.09□□□□□ -0.95
CD44-214ENST00000525211 CADPS2Q86UW7 1296 aa9.09□□□□□ -0.95
CD44-214ENST00000525211 POLR3GLQ9BT43 218 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms