RNA–Protein interactions for RNA: ENST00000525148.1

NPAS4-203, Transcript of neuronal PAS domain protein 4, humanhuman

TSL 1 (best)

Gene NPAS4, Length 2,454 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-203ENST00000525148 STAG3Q9UJ98 1225 aa22.71■■□□□ 1.23
NPAS4-203ENST00000525148 CCDC136Q96JN2 1154 aa22.71■■□□□ 1.23
NPAS4-203ENST00000525148 PTPRMP28827 1452 aa22.71■■□□□ 1.23
NPAS4-203ENST00000525148 PRAM1Q96QH2 718 aa22.7■■□□□ 1.22
NPAS4-203ENST00000525148 MINK1Q8N4C8 1332 aaPredicted RBP22.69■■□□□ 1.22
NPAS4-203ENST00000525148 APAF1O14727 1248 aa22.69■■□□□ 1.22
NPAS4-203ENST00000525148 YTHDC2Q9H6S0 1430 aaKnown RBP22.68■■□□□ 1.22
NPAS4-203ENST00000525148 DUSP27Q5VZP5 1158 aa22.67■■□□□ 1.22
NPAS4-203ENST00000525148 PPP6R1Q9UPN7 881 aa22.67■■□□□ 1.22
NPAS4-203ENST00000525148 ALKQ9UM73 1620 aa22.67■■□□□ 1.22
NPAS4-203ENST00000525148 A2ML1A8K2U0 1454 aa22.67■■□□□ 1.22
NPAS4-203ENST00000525148 SPINK5Q9NQ38 1064 aaPredicted RBP22.66■■□□□ 1.22
NPAS4-203ENST00000525148 ARHGEF40Q8TER5 1519 aa22.66■■□□□ 1.22
NPAS4-203ENST00000525148 SPATA31D1Q6ZQQ2 1576 aa22.66■■□□□ 1.22
NPAS4-203ENST00000525148 POLR3AO14802 1390 aaPredicted RBP22.66■■□□□ 1.22
NPAS4-203ENST00000525148 ANKRD36BQ8N2N9 1353 aa22.66■■□□□ 1.22
NPAS4-203ENST00000525148 PUS7Q96PZ0 661 aaKnown RBP22.66■■□□□ 1.22
NPAS4-203ENST00000525148 SRPK2P78362 688 aaKnown RBP22.65■■□□□ 1.22
NPAS4-203ENST00000525148 DMRT2Q9Y5R5 561 aa22.64■■□□□ 1.21
NPAS4-203ENST00000525148 CGNL1Q0VF96 1302 aa22.63■■□□□ 1.21
NPAS4-203ENST00000525148 GOLGA2Q08379 1002 aa22.63■■□□□ 1.21
NPAS4-203ENST00000525148 POGKQ9P215 609 aa22.63■■□□□ 1.21
NPAS4-203ENST00000525148 USP32Q8NFA0 1604 aa22.62■■□□□ 1.21
NPAS4-203ENST00000525148 A0A1W2PP64 1363 aa22.62■■□□□ 1.21
NPAS4-203ENST00000525148 RIMS2Q9UQ26 1411 aa22.61■■□□□ 1.21
NPAS4-203ENST00000525148 MTHFSP49914 203 aa22.61■■□□□ 1.21
NPAS4-203ENST00000525148 SLFN5Q08AF3 891 aa22.61■■□□□ 1.21
NPAS4-203ENST00000525148 SHPRHQ149N8 1683 aa22.61■■□□□ 1.21
NPAS4-203ENST00000525148 C20orf194Q5TEA3 1177 aa22.6■■□□□ 1.21
NPAS4-203ENST00000525148 ZMYM3Q14202 1370 aa22.59■■□□□ 1.21
NPAS4-203ENST00000525148 WAPLQ7Z5K2 1190 aa22.59■■□□□ 1.21
NPAS4-203ENST00000525148 TRMT2AQ8IZ69 625 aaKnown RBP22.57■■□□□ 1.2
NPAS4-203ENST00000525148 CRBNQ96SW2 442 aa22.57■■□□□ 1.2
NPAS4-203ENST00000525148 CDK19Q9BWU1 502 aa22.56■■□□□ 1.2
NPAS4-203ENST00000525148 CD163L1Q9NR16 1453 aa22.56■■□□□ 1.2
NPAS4-203ENST00000525148 GGNBP2Q9H3C7 697 aa22.55■■□□□ 1.2
NPAS4-203ENST00000525148 RRP7AQ9Y3A4 280 aaKnown RBP22.54■■□□□ 1.2
NPAS4-203ENST00000525148 ABCC11Q96J66 1382 aa22.54■■□□□ 1.2
NPAS4-203ENST00000525148 ESF1Q9H501 851 aaKnown RBP22.53■■□□□ 1.2
NPAS4-203ENST00000525148 SETD1AO15047 1707 aaKnown RBP22.52■■□□□ 1.2
NPAS4-203ENST00000525148 ATAD2Q6PL18 1390 aa22.52■■□□□ 1.2
NPAS4-203ENST00000525148 NEUROD2Q15784 382 aa22.51■■□□□ 1.19
NPAS4-203ENST00000525148 CABP1Q9NZU7 370 aa22.51■■□□□ 1.19
NPAS4-203ENST00000525148 NSD2O96028 1365 aa22.51■■□□□ 1.19
NPAS4-203ENST00000525148 METP08581 1390 aa22.51■■□□□ 1.19
NPAS4-203ENST00000525148 FYB1O15117 783 aa22.5■■□□□ 1.19
NPAS4-203ENST00000525148 NRXN3Q9Y4C0 1643 aa22.5■■□□□ 1.19
NPAS4-203ENST00000525148 NINLQ9Y2I6 1382 aa22.5■■□□□ 1.19
NPAS4-203ENST00000525148 WWC1Q8IX03 1113 aa22.5■■□□□ 1.19
NPAS4-203ENST00000525148 MSH5O43196 834 aa22.49■■□□□ 1.19
NPAS4-203ENST00000525148 RUNDC1Q96C34 613 aa22.48■■□□□ 1.19
NPAS4-203ENST00000525148 NLRP1Q9C000 1473 aa22.48■■□□□ 1.19
NPAS4-203ENST00000525148 TCP11L2Q8N4U5 519 aa22.48■■□□□ 1.19
NPAS4-203ENST00000525148 TERF2IPQ9NYB0 399 aa22.48■■□□□ 1.19
NPAS4-203ENST00000525148 IQSEC2Q5JU85 1478 aa22.47■■□□□ 1.19
NPAS4-203ENST00000525148 E9PSI1 815 aa22.46■■□□□ 1.19
NPAS4-203ENST00000525148 CFAP53Q96M91 514 aa22.46■■□□□ 1.19
NPAS4-203ENST00000525148 DLC1Q96QB1 1528 aa22.46■■□□□ 1.19
NPAS4-203ENST00000525148 NKTRP30414 1462 aaKnown RBP22.46■■□□□ 1.19
NPAS4-203ENST00000525148 TNRQ92752 1358 aa22.46■■□□□ 1.19
NPAS4-203ENST00000525148 BCAR3O75815 825 aa22.45■■□□□ 1.18
NPAS4-203ENST00000525148 TXNDC2Q86VQ3 553 aa22.45■■□□□ 1.18
NPAS4-203ENST00000525148 U2AF1L5P0DN76 240 aaPredicted RBP22.43■■□□□ 1.18
NPAS4-203ENST00000525148 U2AF1Q01081 240 aaKnown RBP eCLIP22.43■■□□□ 1.18
NPAS4-203ENST00000525148 SKAP1Q86WV1 359 aa22.43■■□□□ 1.18
NPAS4-203ENST00000525148 FANCIQ9NVI1 1328 aa22.43■■□□□ 1.18
NPAS4-203ENST00000525148 CEBPAP49715 358 aaPredicted RBP22.42■■□□□ 1.18
NPAS4-203ENST00000525148 FBLN1P23142 703 aa22.42■■□□□ 1.18
NPAS4-203ENST00000525148 HDGFL2Q7Z4V5 671 aaPredicted RBP22.42■■□□□ 1.18
NPAS4-203ENST00000525148 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.41■■□□□ 1.18
NPAS4-203ENST00000525148 PHF23Q9BUL5 403 aaPredicted RBP22.41■■□□□ 1.18
NPAS4-203ENST00000525148 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.41■■□□□ 1.18
NPAS4-203ENST00000525148 NCKAP5LQ9HCH0 1330 aa22.41■■□□□ 1.18
NPAS4-203ENST00000525148 NGEFQ8N5V2 710 aa22.4■■□□□ 1.18
NPAS4-203ENST00000525148 COL3A1P02461 1466 aaPredicted RBP22.4■■□□□ 1.18
NPAS4-203ENST00000525148 TMEM2Q9UHN6 1383 aa22.38■■□□□ 1.17
NPAS4-203ENST00000525148 WASLO00401 505 aaPredicted RBP22.37■■□□□ 1.17
NPAS4-203ENST00000525148 U2SURPO15042 1029 aaKnown RBP22.37■■□□□ 1.17
NPAS4-203ENST00000525148 MED14O60244 1454 aa22.37■■□□□ 1.17
NPAS4-203ENST00000525148 UBR1Q8IWV7 1749 aa22.36■■□□□ 1.17
NPAS4-203ENST00000525148 LTKP29376 864 aa22.36■■□□□ 1.17
NPAS4-203ENST00000525148 PLPPR3Q6T4P5 718 aa22.36■■□□□ 1.17
NPAS4-203ENST00000525148 ANKRD26Q9UPS8 1709 aa22.35■■□□□ 1.17
NPAS4-203ENST00000525148 PLEKHF1Q96S99 279 aa22.34■■□□□ 1.17
NPAS4-203ENST00000525148 ZRANB1Q9UGI0 708 aa22.34■■□□□ 1.17
NPAS4-203ENST00000525148 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.33■■□□□ 1.16
NPAS4-203ENST00000525148 PPIP5K1Q6PFW1 1433 aa22.32■■□□□ 1.16
NPAS4-203ENST00000525148 ADAMTS13Q76LX8 1427 aa22.32■■□□□ 1.16
NPAS4-203ENST00000525148 ATP7BP35670 1465 aa22.32■■□□□ 1.16
NPAS4-203ENST00000525148 ROBO2Q9HCK4 1378 aa22.31■■□□□ 1.16
NPAS4-203ENST00000525148 CCDC27Q2M243 656 aa22.31■■□□□ 1.16
NPAS4-203ENST00000525148 WDR63Q8IWG1 891 aa22.31■■□□□ 1.16
NPAS4-203ENST00000525148 NUDT16Q96DE0 195 aaKnown RBP22.31■■□□□ 1.16
NPAS4-203ENST00000525148 KDM2BQ8NHM5 1336 aa22.31■■□□□ 1.16
NPAS4-203ENST00000525148 ADGRB2O60241 1585 aa22.31■■□□□ 1.16
NPAS4-203ENST00000525148 KIF20BQ96Q89 1820 aa22.31■■□□□ 1.16
NPAS4-203ENST00000525148 HDGFP51858 240 aaKnown RBP22.3■■□□□ 1.16
NPAS4-203ENST00000525148 NME9Q86XW9 330 aa22.3■■□□□ 1.16
NPAS4-203ENST00000525148 TECPR2O15040 1411 aa22.3■■□□□ 1.16
NPAS4-203ENST00000525148 CPSF1Q10570 1443 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms