RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 POTEEQ6S8J3 1075 aa6.36□□□□□ -1.39
CSDE1-209ENST00000525132 NGLY1Q96IV0 654 aa6.36□□□□□ -1.39
CSDE1-209ENST00000525132 RNF17Q9BXT8 1623 aaKnown RBP6.36□□□□□ -1.39
CSDE1-209ENST00000525132 ARHGEF12Q9NZN5 1544 aa6.35□□□□□ -1.39
CSDE1-209ENST00000525132 TCOF1Q13428 1488 aaKnown RBP6.35□□□□□ -1.39
CSDE1-209ENST00000525132 SCAF11Q99590 1463 aaKnown RBP6.35□□□□□ -1.39
CSDE1-209ENST00000525132 TRAPPC8Q9Y2L5 1435 aa6.35□□□□□ -1.39
CSDE1-209ENST00000525132 ERBB3P21860 1342 aa6.35□□□□□ -1.39
CSDE1-209ENST00000525132 SPATA31A6Q5VVP1 1343 aa6.35□□□□□ -1.39
CSDE1-209ENST00000525132 PCNTO95613 3336 aa6.35□□□□□ -1.39
CSDE1-209ENST00000525132 ARHGEF40Q8TER5 1519 aa6.35□□□□□ -1.39
CSDE1-209ENST00000525132 PTPRGP23470 1445 aa6.34□□□□□ -1.39
CSDE1-209ENST00000525132 MAP3K9P80192 1104 aa6.34□□□□□ -1.39
CSDE1-209ENST00000525132 PCDHGA10Q9Y5H3 936 aa6.34□□□□□ -1.39
CSDE1-209ENST00000525132 KDM5BQ9UGL1 1544 aa6.34□□□□□ -1.39
CSDE1-209ENST00000525132 WDR7Q9Y4E6 1490 aa6.34□□□□□ -1.4
CSDE1-209ENST00000525132 USP19O94966 1318 aa6.33□□□□□ -1.4
CSDE1-209ENST00000525132 FRMPD1Q5SYB0 1578 aa6.33□□□□□ -1.4
CSDE1-209ENST00000525132 FAM83GA6ND36 823 aa6.33□□□□□ -1.4
CSDE1-209ENST00000525132 SEMA3EO15041 775 aa6.33□□□□□ -1.4
CSDE1-209ENST00000525132 PHF14O94880 888 aa6.33□□□□□ -1.4
CSDE1-209ENST00000525132 OSBPP22059 807 aa6.33□□□□□ -1.4
CSDE1-209ENST00000525132 MLLT3P42568 568 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-209ENST00000525132 SF3B2Q13435 895 aaKnown RBP6.33□□□□□ -1.4
CSDE1-209ENST00000525132 KLRG1Q96E93 195 aa6.33□□□□□ -1.4
CSDE1-209ENST00000525132 ZCCHC6Q5VYS8 1495 aaKnown RBP6.33□□□□□ -1.4
CSDE1-209ENST00000525132 VARS2Q5ST30 1063 aaKnown RBP6.32□□□□□ -1.4
CSDE1-209ENST00000525132 COL26A1Q96A83 441 aa6.32□□□□□ -1.4
CSDE1-209ENST00000525132 RAPGEF2Q9Y4G8 1499 aa6.32□□□□□ -1.4
CSDE1-209ENST00000525132 SHANK3Q9BYB0 1731 aa6.31□□□□□ -1.4
CSDE1-209ENST00000525132 PLA2R1Q13018 1463 aa6.31□□□□□ -1.4
CSDE1-209ENST00000525132 ZNF687Q8N1G0 1237 aa6.31□□□□□ -1.4
CSDE1-209ENST00000525132 SNX27Q96L92 541 aa6.31□□□□□ -1.4
CSDE1-209ENST00000525132 CARMIL2Q6F5E8 1435 aa6.31□□□□□ -1.4
CSDE1-209ENST00000525132 PRDM2Q13029 1718 aa6.3□□□□□ -1.4
CSDE1-209ENST00000525132 HSPA1AP0DMV8 641 aaKnown RBP6.3□□□□□ -1.4
CSDE1-209ENST00000525132 HSPA1BP0DMV9 641 aaKnown RBP6.3□□□□□ -1.4
CSDE1-209ENST00000525132 AKNAQ7Z591 1439 aa6.3□□□□□ -1.4
CSDE1-209ENST00000525132 GPR37O15354 613 aa6.29□□□□□ -1.4
CSDE1-209ENST00000525132 HTRA3P83110 453 aa6.29□□□□□ -1.4
CSDE1-209ENST00000525132 EN1Q05925 392 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-209ENST00000525132 EPAS1Q99814 870 aa6.29□□□□□ -1.4
CSDE1-209ENST00000525132 ADAM33Q9BZ11 813 aa6.29□□□□□ -1.4
CSDE1-209ENST00000525132 BCL2L12Q9HB09 334 aa6.29□□□□□ -1.4
CSDE1-209ENST00000525132 TYW1BQ6NUM6 668 aa6.28□□□□□ -1.4
CSDE1-209ENST00000525132 DDX12PQ92771 950 aa6.28□□□□□ -1.4
CSDE1-209ENST00000525132 C3P01024 1663 aa6.28□□□□□ -1.4
CSDE1-209ENST00000525132 ROBO1Q9Y6N7 1651 aa6.28□□□□□ -1.4
CSDE1-209ENST00000525132 TNRC18O15417 2968 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-209ENST00000525132 CDK13Q14004 1512 aaKnown RBP6.27□□□□□ -1.41
CSDE1-209ENST00000525132 ZNF454Q8N9F8 522 aa6.27□□□□□ -1.41
CSDE1-209ENST00000525132 SLC17A8Q8NDX2 589 aa6.27□□□□□ -1.41
CSDE1-209ENST00000525132 FBXW7Q969H0 707 aa6.27□□□□□ -1.41
CSDE1-209ENST00000525132 ZDHHC16Q969W1 377 aa6.27□□□□□ -1.41
CSDE1-209ENST00000525132 PHLDB1Q86UU1 1377 aa6.27□□□□□ -1.41
CSDE1-209ENST00000525132 PHLPP1O60346 1717 aa6.26□□□□□ -1.41
CSDE1-209ENST00000525132 PBX2P40425 430 aa6.26□□□□□ -1.41
CSDE1-209ENST00000525132 PPP4R3BQ5MIZ7 849 aa6.26□□□□□ -1.41
CSDE1-209ENST00000525132 ABHD8Q96I13 439 aa6.26□□□□□ -1.41
CSDE1-209ENST00000525132 C8orf37Q96NL8 207 aa6.26□□□□□ -1.41
CSDE1-209ENST00000525132 SPON1Q9HCB6 807 aa6.26□□□□□ -1.41
CSDE1-209ENST00000525132 NPDC1Q9NQX5 325 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-209ENST00000525132 UHRF1BP1LA0JNW5 1464 aa6.25□□□□□ -1.41
CSDE1-209ENST00000525132 FGD5Q6ZNL6 1462 aa6.25□□□□□ -1.41
CSDE1-209ENST00000525132 STRCP1A6NGW2 1772 aa6.24□□□□□ -1.41
CSDE1-209ENST00000525132 NBR1Q14596 966 aa6.24□□□□□ -1.41
CSDE1-209ENST00000525132 TSR1Q2NL82 804 aaKnown RBP6.24□□□□□ -1.41
CSDE1-209ENST00000525132 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.24□□□□□ -1.41
CSDE1-209ENST00000525132 TTC13Q8NBP0 860 aa6.24□□□□□ -1.41
CSDE1-209ENST00000525132 SLC4A5Q9BY07 1137 aa6.24□□□□□ -1.41
CSDE1-209ENST00000525132 ZCCHC11Q5TAX3 1644 aaKnown RBP6.24□□□□□ -1.41
CSDE1-209ENST00000525132 ADAMTS12P58397 1594 aa6.23□□□□□ -1.41
CSDE1-209ENST00000525132 CCDC85CA6NKD9 419 aa6.23□□□□□ -1.41
CSDE1-209ENST00000525132 KCNQ2O43526 872 aa6.23□□□□□ -1.41
CSDE1-209ENST00000525132 COL9A1P20849 921 aa6.23□□□□□ -1.41
CSDE1-209ENST00000525132 C6orf132Q5T0Z8 1188 aa6.23□□□□□ -1.41
CSDE1-209ENST00000525132 CDHR5Q9HBB8 845 aa6.23□□□□□ -1.41
CSDE1-209ENST00000525132 GPBP1L1Q9HC44 474 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-209ENST00000525132 GRXCR2A6NFK2 248 aa6.22□□□□□ -1.41
CSDE1-209ENST00000525132 PPP1R3GB7ZBB8 358 aa6.22□□□□□ -1.41
CSDE1-209ENST00000525132 ARHGAP33O14559 1287 aa6.22□□□□□ -1.41
CSDE1-209ENST00000525132 DMRTA1Q5VZB9 504 aa6.22□□□□□ -1.41
CSDE1-209ENST00000525132 ANKRD13DQ6ZTN6 518 aa6.22□□□□□ -1.41
CSDE1-209ENST00000525132 XIRP1Q702N8 1843 aaKnown RBP6.21□□□□□ -1.42
CSDE1-209ENST00000525132 BAG6P46379 1132 aa6.21□□□□□ -1.42
CSDE1-209ENST00000525132 PTGDRQ13258 359 aa6.21□□□□□ -1.42
CSDE1-209ENST00000525132 RBM26Q5T8P6 1007 aaKnown RBP6.21□□□□□ -1.42
CSDE1-209ENST00000525132 ZBED2Q9BTP6 218 aa6.21□□□□□ -1.42
CSDE1-209ENST00000525132 UACAQ9BZF9 1416 aa6.21□□□□□ -1.42
CSDE1-209ENST00000525132 SUPT6HQ7KZ85 1726 aaKnown RBP6.21□□□□□ -1.42
CSDE1-209ENST00000525132 RGS20O76081 388 aa6.2□□□□□ -1.42
CSDE1-209ENST00000525132 PSEN2P49810 448 aa6.2□□□□□ -1.42
CSDE1-209ENST00000525132 LSM11P83369 360 aaKnown RBP eCLIP6.2□□□□□ -1.42
CSDE1-209ENST00000525132 FGD6Q6ZV73 1430 aa6.19□□□□□ -1.42
CSDE1-209ENST00000525132 TK2O00142 265 aa6.19□□□□□ -1.42
CSDE1-209ENST00000525132 HRO43593 1189 aa6.19□□□□□ -1.42
CSDE1-209ENST00000525132 PTPREP23469 700 aa6.19□□□□□ -1.42
CSDE1-209ENST00000525132 PRPF38BQ5VTL8 546 aaKnown RBP6.19□□□□□ -1.42
CSDE1-209ENST00000525132 ZNF526Q8TF50 670 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-209ENST00000525132 BCANQ96GW7 911 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms