RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 TOM1O60784 492 aa10.1□□□□□ -0.79
VPS11-201ENST00000524454 PRR29P0C7W0 189 aa10.1□□□□□ -0.79
VPS11-201ENST00000524454 TBX22Q9Y458 520 aa10.1□□□□□ -0.79
VPS11-201ENST00000524454 METP08581 1390 aa10.1□□□□□ -0.79
VPS11-201ENST00000524454 SPATA31E1Q6ZUB1 1445 aa10.09□□□□□ -0.79
VPS11-201ENST00000524454 PIP4P2Q8N4L2 257 aa10.09□□□□□ -0.79
VPS11-201ENST00000524454 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.08□□□□□ -0.8
VPS11-201ENST00000524454 HSPA1LP34931 641 aa10.08□□□□□ -0.8
VPS11-201ENST00000524454 FBXO3Q9UK99 471 aa10.08□□□□□ -0.8
VPS11-201ENST00000524454 AMOTL2Q9Y2J4 779 aa10.08□□□□□ -0.8
VPS11-201ENST00000524454 ROBO1Q9Y6N7 1651 aa10.08□□□□□ -0.8
VPS11-201ENST00000524454 ADGRF5Q8IZF2 1346 aa10.07□□□□□ -0.8
VPS11-201ENST00000524454 NALCNQ8IZF0 1738 aa10.07□□□□□ -0.8
VPS11-201ENST00000524454 C14orf37Q86TY3 774 aa10.06□□□□□ -0.8
VPS11-201ENST00000524454 MSH6P52701 1360 aa10.05□□□□□ -0.8
VPS11-201ENST00000524454 PIK3R4Q99570 1358 aa10.05□□□□□ -0.8
VPS11-201ENST00000524454 VGFO15240 615 aaPredicted RBP10.05□□□□□ -0.8
VPS11-201ENST00000524454 DIEXFQ68CQ4 756 aaKnown RBP10.05□□□□□ -0.8
VPS11-201ENST00000524454 ASXL1Q8IXJ9 1541 aa10.05□□□□□ -0.8
VPS11-201ENST00000524454 RPGRIP1LQ68CZ1 1315 aa10.05□□□□□ -0.8
VPS11-201ENST00000524454 SIN3AQ96ST3 1273 aa10.04□□□□□ -0.8
VPS11-201ENST00000524454 CREBZFQ9NS37 354 aa10.04□□□□□ -0.8
VPS11-201ENST00000524454 VASPP50552 380 aaPredicted RBP10.03□□□□□ -0.8
VPS11-201ENST00000524454 ROBO2Q9HCK4 1378 aa10.02□□□□□ -0.8
VPS11-201ENST00000524454 PHLPP1O60346 1717 aa10.02□□□□□ -0.8
VPS11-201ENST00000524454 PIK3C2GO75747 1445 aa10.02□□□□□ -0.81
VPS11-201ENST00000524454 TMEM132EQ6IEE7 984 aa10.02□□□□□ -0.81
VPS11-201ENST00000524454 CHADLQ6NUI6 762 aa10.02□□□□□ -0.81
VPS11-201ENST00000524454 NEUROD1Q13562 356 aa10.01□□□□□ -0.81
VPS11-201ENST00000524454 STK26Q9P289 416 aa10.01□□□□□ -0.81
VPS11-201ENST00000524454 DISP3Q9P2K9 1392 aa10.01□□□□□ -0.81
VPS11-201ENST00000524454 MYOM2P54296 1465 aa10□□□□□ -0.81
VPS11-201ENST00000524454 KNDC1Q76NI1 1749 aa10□□□□□ -0.81
VPS11-201ENST00000524454 PRKAR2AP13861 404 aaKnown RBP10□□□□□ -0.81
VPS11-201ENST00000524454 SLAIN2Q9P270 581 aa10□□□□□ -0.81
VPS11-201ENST00000524454 KDM2AQ9Y2K7 1162 aa10□□□□□ -0.81
VPS11-201ENST00000524454 MED1Q15648 1581 aaPredicted RBP10□□□□□ -0.81
VPS11-201ENST00000524454 LAMC1P11047 1609 aa10□□□□□ -0.81
VPS11-201ENST00000524454 NRXN1Q9ULB1 1477 aa9.99□□□□□ -0.81
VPS11-201ENST00000524454 ATF3P18847 181 aa9.99□□□□□ -0.81
VPS11-201ENST00000524454 CFAP70Q5T0N1 1121 aa9.99□□□□□ -0.81
VPS11-201ENST00000524454 C19orf44Q9H6X5 657 aa9.99□□□□□ -0.81
VPS11-201ENST00000524454 PTCH1Q13635 1447 aa9.99□□□□□ -0.81
VPS11-201ENST00000524454 FAM135BQ49AJ0 1406 aa9.99□□□□□ -0.81
VPS11-201ENST00000524454 ADGRL3Q9HAR2 1447 aa9.99□□□□□ -0.81
VPS11-201ENST00000524454 NCOA3Q9Y6Q9 1424 aa9.99□□□□□ -0.81
VPS11-201ENST00000524454 DCAF11Q8TEB1 546 aa9.98□□□□□ -0.81
VPS11-201ENST00000524454 PLEKHH1Q9ULM0 1364 aa9.98□□□□□ -0.81
VPS11-201ENST00000524454 MST1RQ04912 1400 aa9.98□□□□□ -0.81
VPS11-201ENST00000524454 COL16A1Q07092 1604 aaPredicted RBP9.97□□□□□ -0.81
VPS11-201ENST00000524454 MNX1P50219 401 aaPredicted RBP9.97□□□□□ -0.81
VPS11-201ENST00000524454 WAPLQ7Z5K2 1190 aa9.97□□□□□ -0.81
VPS11-201ENST00000524454 STAC3Q96MF2 364 aa9.97□□□□□ -0.81
VPS11-201ENST00000524454 YTHDC2Q9H6S0 1430 aaKnown RBP9.97□□□□□ -0.81
VPS11-201ENST00000524454 RALGAPBQ86X10 1494 aa9.97□□□□□ -0.81
VPS11-201ENST00000524454 CADPS2Q86UW7 1296 aa9.96□□□□□ -0.82
VPS11-201ENST00000524454 DDX17Q92841 729 aaKnown RBP9.96□□□□□ -0.82
VPS11-201ENST00000524454 LRPPRCP42704 1394 aaKnown RBP9.96□□□□□ -0.82
VPS11-201ENST00000524454 L3MBTL2Q969R5 705 aa9.95□□□□□ -0.82
VPS11-201ENST00000524454 C14orf93Q9H972 538 aaKnown RBP9.95□□□□□ -0.82
VPS11-201ENST00000524454 DCCP43146 1447 aa9.95□□□□□ -0.82
VPS11-201ENST00000524454 PRAG1Q86YV5 1406 aa9.95□□□□□ -0.82
VPS11-201ENST00000524454 NHSL1Q5SYE7 1610 aa9.95□□□□□ -0.82
VPS11-201ENST00000524454 RGPD8O14715 1765 aaPredicted RBP9.95□□□□□ -0.82
VPS11-201ENST00000524454 AHDC1Q5TGY3 1603 aaPredicted RBP9.94□□□□□ -0.82
VPS11-201ENST00000524454 ADGRB1O14514 1584 aa9.94□□□□□ -0.82
VPS11-201ENST00000524454 NUTM2FA1L443 756 aa9.94□□□□□ -0.82
VPS11-201ENST00000524454 SAFB2Q14151 953 aaKnown RBP eCLIP9.94□□□□□ -0.82
VPS11-201ENST00000524454 BRINP3Q76B58 766 aa9.94□□□□□ -0.82
VPS11-201ENST00000524454 MIER1Q8N108 512 aa9.94□□□□□ -0.82
VPS11-201ENST00000524454 FMN2Q9NZ56 1722 aa9.93□□□□□ -0.82
VPS11-201ENST00000524454 CDC42BPGQ6DT37 1551 aa9.93□□□□□ -0.82
VPS11-201ENST00000524454 TECPR2O15040 1411 aa9.93□□□□□ -0.82
VPS11-201ENST00000524454 POTEHQ6S545 545 aa9.93□□□□□ -0.82
VPS11-201ENST00000524454 ILDR2Q71H61 639 aa9.93□□□□□ -0.82
VPS11-201ENST00000524454 PLCD3Q8N3E9 789 aa9.93□□□□□ -0.82
VPS11-201ENST00000524454 ARHGEF28Q8N1W1 1705 aaKnown RBP9.93□□□□□ -0.82
VPS11-201ENST00000524454 C1orf167Q5SNV9 1468 aa9.92□□□□□ -0.82
VPS11-201ENST00000524454 ABCC11Q96J66 1382 aa9.92□□□□□ -0.82
VPS11-201ENST00000524454 IFNLR1Q8IU57 520 aaPredicted RBP9.92□□□□□ -0.82
VPS11-201ENST00000524454 ORAI2Q96SN7 254 aa9.92□□□□□ -0.82
VPS11-201ENST00000524454 SHPRHQ149N8 1683 aa9.91□□□□□ -0.82
VPS11-201ENST00000524454 EIF4G2P78344 907 aaKnown RBP eCLIP9.91□□□□□ -0.82
VPS11-201ENST00000524454 PRAM1Q96QH2 718 aa9.91□□□□□ -0.82
VPS11-201ENST00000524454 TRAK1Q9UPV9 953 aa9.91□□□□□ -0.82
VPS11-201ENST00000524454 FARP1Q9Y4F1 1045 aaPredicted RBP9.9□□□□□ -0.82
VPS11-201ENST00000524454 KIAA1210Q9ULL0 1709 aa9.9□□□□□ -0.83
VPS11-201ENST00000524454 LRP6O75581 1613 aa9.89□□□□□ -0.83
VPS11-201ENST00000524454 GPRASP1Q5JY77 1395 aa9.89□□□□□ -0.83
VPS11-201ENST00000524454 DLC1Q96QB1 1528 aa9.89□□□□□ -0.83
VPS11-201ENST00000524454 HIRIP3Q9BW71 556 aaPredicted RBP9.89□□□□□ -0.83
VPS11-201ENST00000524454 TRPM1Q7Z4N2 1603 aa9.89□□□□□ -0.83
VPS11-201ENST00000524454 USP32Q8NFA0 1604 aa9.89□□□□□ -0.83
VPS11-201ENST00000524454 JCADQ9P266 1359 aa9.88□□□□□ -0.83
VPS11-201ENST00000524454 MINK1Q8N4C8 1332 aaPredicted RBP9.88□□□□□ -0.83
VPS11-201ENST00000524454 XPCQ01831 940 aaPredicted RBP9.88□□□□□ -0.83
VPS11-201ENST00000524454 ESCO1Q5FWF5 840 aa9.88□□□□□ -0.83
VPS11-201ENST00000524454 POGKQ9P215 609 aa9.88□□□□□ -0.83
VPS11-201ENST00000524454 NUTM2BA6NNL0 878 aaPredicted RBP9.87□□□□□ -0.83
VPS11-201ENST00000524454 NUTM2EB1AL46 878 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms