RNA–Protein interactions for RNA: ENST00000524152.5

MSC-AS1-210, MSC antisense RNA 1, humanhuman

TSL 4

Gene MSC-AS1, Length 571 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-210ENST00000524152 UPF1Q92900 1129 aaKnown RBP eCLIP14.1□□□□□ -0.15
MSC-AS1-210ENST00000524152 LAMC1P11047 1609 aa14.09□□□□□ -0.15
MSC-AS1-210ENST00000524152 STK26Q9P289 416 aa14.09□□□□□ -0.15
MSC-AS1-210ENST00000524152 TECPR2O15040 1411 aa14.08□□□□□ -0.15
MSC-AS1-210ENST00000524152 RBM6P78332 1123 aaKnown RBP14.08□□□□□ -0.16
MSC-AS1-210ENST00000524152 ESCO1Q5FWF5 840 aa14.08□□□□□ -0.16
MSC-AS1-210ENST00000524152 NGLY1Q96IV0 654 aa14.08□□□□□ -0.16
MSC-AS1-210ENST00000524152 QTRT2Q9H974 415 aaKnown RBP14.08□□□□□ -0.16
MSC-AS1-210ENST00000524152 NPHP3Q7Z494 1330 aa14.08□□□□□ -0.16
MSC-AS1-210ENST00000524152 CDC42BPGQ6DT37 1551 aa14.08□□□□□ -0.16
MSC-AS1-210ENST00000524152 LRPPRCP42704 1394 aaKnown RBP14.08□□□□□ -0.16
MSC-AS1-210ENST00000524152 ACIN1Q9UKV3 1341 aaKnown RBP14.07□□□□□ -0.16
MSC-AS1-210ENST00000524152 ABCC11Q96J66 1382 aa14.07□□□□□ -0.16
MSC-AS1-210ENST00000524152 PIK3C2GO75747 1445 aa14.07□□□□□ -0.16
MSC-AS1-210ENST00000524152 WAPLQ7Z5K2 1190 aa14.06□□□□□ -0.16
MSC-AS1-210ENST00000524152 TMEM132EQ6IEE7 984 aa14.05□□□□□ -0.16
MSC-AS1-210ENST00000524152 RGS12O14924 1447 aa14.05□□□□□ -0.16
MSC-AS1-210ENST00000524152 FOXO3O43524 673 aa14.04□□□□□ -0.16
MSC-AS1-210ENST00000524152 USP21Q9UK80 565 aa14.04□□□□□ -0.16
MSC-AS1-210ENST00000524152 PLEKHH1Q9ULM0 1364 aa14.04□□□□□ -0.16
MSC-AS1-210ENST00000524152 FNBP4Q8N3X1 1017 aaPredicted RBP14.03□□□□□ -0.16
MSC-AS1-210ENST00000524152 YTHDC2Q9H6S0 1430 aaKnown RBP14.03□□□□□ -0.16
MSC-AS1-210ENST00000524152 PXDNQ92626 1479 aa14.03□□□□□ -0.16
MSC-AS1-210ENST00000524152 MYOM2P54296 1465 aa14.02□□□□□ -0.16
MSC-AS1-210ENST00000524152 NUTM2FA1L443 756 aa14.02□□□□□ -0.17
MSC-AS1-210ENST00000524152 XPCQ01831 940 aaPredicted RBP14.02□□□□□ -0.17
MSC-AS1-210ENST00000524152 TRPC5Q9UL62 973 aaPredicted RBP14.02□□□□□ -0.17
MSC-AS1-210ENST00000524152 C14orf93Q9H972 538 aaKnown RBP14.01□□□□□ -0.17
MSC-AS1-210ENST00000524152 IFT172Q9UG01 1749 aa14.01□□□□□ -0.17
MSC-AS1-210ENST00000524152 COL22A1Q8NFW1 1626 aaPredicted RBP14.01□□□□□ -0.17
MSC-AS1-210ENST00000524152 SIRT1Q96EB6 747 aa14□□□□□ -0.17
MSC-AS1-210ENST00000524152 NRXN1Q9ULB1 1477 aa13.99□□□□□ -0.17
MSC-AS1-210ENST00000524152 ATRNO75882 1429 aa13.98□□□□□ -0.17
MSC-AS1-210ENST00000524152 KNDC1Q76NI1 1749 aa13.98□□□□□ -0.17
MSC-AS1-210ENST00000524152 CFAP70Q5T0N1 1121 aa13.98□□□□□ -0.17
MSC-AS1-210ENST00000524152 DHX57Q6P158 1386 aaKnown RBP13.97□□□□□ -0.17
MSC-AS1-210ENST00000524152 RAB3GAP2Q9H2M9 1393 aa13.97□□□□□ -0.17
MSC-AS1-210ENST00000524152 ATAD2Q6PL18 1390 aa13.96□□□□□ -0.17
MSC-AS1-210ENST00000524152 SPATA31A3Q5VYP0 1347 aa13.96□□□□□ -0.17
MSC-AS1-210ENST00000524152 BCL9LQ86UU0 1499 aa13.96□□□□□ -0.17
MSC-AS1-210ENST00000524152 KRT28Q7Z3Y7 464 aa13.95□□□□□ -0.18
MSC-AS1-210ENST00000524152 PRAM1Q96QH2 718 aa13.95□□□□□ -0.18
MSC-AS1-210ENST00000524152 SAFB2Q14151 953 aaKnown RBP eCLIP13.94□□□□□ -0.18
MSC-AS1-210ENST00000524152 FMN2Q9NZ56 1722 aa13.94□□□□□ -0.18
MSC-AS1-210ENST00000524152 PHF8Q9UPP1 1060 aa13.94□□□□□ -0.18
MSC-AS1-210ENST00000524152 GJD4Q96KN9 370 aaPredicted RBP13.93□□□□□ -0.18
MSC-AS1-210ENST00000524152 KIF1AQ12756 1690 aa13.93□□□□□ -0.18
MSC-AS1-210ENST00000524152 PSME1Q06323 249 aa13.92□□□□□ -0.18
MSC-AS1-210ENST00000524152 POGKQ9P215 609 aa13.92□□□□□ -0.18
MSC-AS1-210ENST00000524152 TNS3Q68CZ2 1445 aa13.91□□□□□ -0.18
MSC-AS1-210ENST00000524152 DLC1Q96QB1 1528 aa13.91□□□□□ -0.18
MSC-AS1-210ENST00000524152 UNC5CLQ8IV45 518 aa13.91□□□□□ -0.18
MSC-AS1-210ENST00000524152 HAP1P54257 671 aaPredicted RBP13.9□□□□□ -0.18
MSC-AS1-210ENST00000524152 SBNO1A3KN83 1393 aa13.9□□□□□ -0.18
MSC-AS1-210ENST00000524152 SLIT2O94813 1529 aa13.9□□□□□ -0.19
MSC-AS1-210ENST00000524152 ANKARQ7Z5J8 1434 aa13.9□□□□□ -0.19
MSC-AS1-210ENST00000524152 ADGRB1O14514 1584 aa13.89□□□□□ -0.19
MSC-AS1-210ENST00000524152 ARHGEF10O15013 1369 aa13.88□□□□□ -0.19
MSC-AS1-210ENST00000524152 CABLES1Q8TDN4 633 aa13.88□□□□□ -0.19
MSC-AS1-210ENST00000524152 TRAK1Q9UPV9 953 aa13.88□□□□□ -0.19
MSC-AS1-210ENST00000524152 RALGAPBQ86X10 1494 aa13.87□□□□□ -0.19
MSC-AS1-210ENST00000524152 USP32Q8NFA0 1604 aa13.87□□□□□ -0.19
MSC-AS1-210ENST00000524152 LMOD2Q6P5Q4 547 aa13.87□□□□□ -0.19
MSC-AS1-210ENST00000524152 PMFBP1Q8TBY8 1022 aa13.87□□□□□ -0.19
MSC-AS1-210ENST00000524152 DCAF11Q8TEB1 546 aa13.87□□□□□ -0.19
MSC-AS1-210ENST00000524152 STAC3Q96MF2 364 aa13.87□□□□□ -0.19
MSC-AS1-210ENST00000524152 HIRIP3Q9BW71 556 aaPredicted RBP13.87□□□□□ -0.19
MSC-AS1-210ENST00000524152 KDM2AQ9Y2K7 1162 aa13.87□□□□□ -0.19
MSC-AS1-210ENST00000524152 MARF1Q9Y4F3 1742 aaKnown RBP13.87□□□□□ -0.19
MSC-AS1-210ENST00000524152 EIF3AQ14152 1382 aaKnown RBP13.86□□□□□ -0.19
MSC-AS1-210ENST00000524152 PLEKHG5O94827 1062 aa13.86□□□□□ -0.19
MSC-AS1-210ENST00000524152 HRCP23327 699 aa13.86□□□□□ -0.19
MSC-AS1-210ENST00000524152 CCDC125Q86Z20 511 aa13.86□□□□□ -0.19
MSC-AS1-210ENST00000524152 ADGRB2O60241 1585 aa13.86□□□□□ -0.19
MSC-AS1-210ENST00000524152 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.85□□□□□ -0.19
MSC-AS1-210ENST00000524152 VPS72Q15906 364 aa13.85□□□□□ -0.19
MSC-AS1-210ENST00000524152 MINK1Q8N4C8 1332 aaPredicted RBP13.85□□□□□ -0.19
MSC-AS1-210ENST00000524152 WASLO00401 505 aaPredicted RBP13.84□□□□□ -0.19
MSC-AS1-210ENST00000524152 PRR36Q9H6K5 1346 aa13.84□□□□□ -0.19
MSC-AS1-210ENST00000524152 GPRASP1Q5JY77 1395 aa13.83□□□□□ -0.19
MSC-AS1-210ENST00000524152 GLI3P10071 1580 aa13.83□□□□□ -0.19
MSC-AS1-210ENST00000524152 RGPD8O14715 1765 aaPredicted RBP13.83□□□□□ -0.2
MSC-AS1-210ENST00000524152 TULP4Q9NRJ4 1543 aa13.82□□□□□ -0.2
MSC-AS1-210ENST00000524152 SEPT12Q8IYM1 358 aa13.82□□□□□ -0.2
MSC-AS1-210ENST00000524152 ZRANB1Q9UGI0 708 aa13.82□□□□□ -0.2
MSC-AS1-210ENST00000524152 FAM83GA6ND36 823 aa13.81□□□□□ -0.2
MSC-AS1-210ENST00000524152 CCDC9Q9Y3X0 531 aaKnown RBP13.81□□□□□ -0.2
MSC-AS1-210ENST00000524152 ONECUT3O60422 494 aaPredicted RBP13.8□□□□□ -0.2
MSC-AS1-210ENST00000524152 NGDNQ8NEJ9 315 aaKnown RBP13.8□□□□□ -0.2
MSC-AS1-210ENST00000524152 BLMP54132 1417 aaPredicted RBP13.8□□□□□ -0.2
MSC-AS1-210ENST00000524152 BTG4Q9NY30 223 aa13.78□□□□□ -0.2
MSC-AS1-210ENST00000524152 NWD2Q9ULI1 1742 aa13.78□□□□□ -0.2
MSC-AS1-210ENST00000524152 PAK3O75914 559 aaPredicted RBP13.77□□□□□ -0.21
MSC-AS1-210ENST00000524152 PLCH1Q4KWH8 1693 aa13.77□□□□□ -0.21
MSC-AS1-210ENST00000524152 KRT27Q7Z3Y8 459 aa13.77□□□□□ -0.21
MSC-AS1-210ENST00000524152 NUDT16Q96DE0 195 aaKnown RBP13.77□□□□□ -0.21
MSC-AS1-210ENST00000524152 ABCA3Q99758 1704 aa13.77□□□□□ -0.21
MSC-AS1-210ENST00000524152 TRPM3Q9HCF6 1732 aaPredicted RBP13.77□□□□□ -0.21
MSC-AS1-210ENST00000524152 ATP7BP35670 1465 aa13.76□□□□□ -0.21
MSC-AS1-210ENST00000524152 A0A0G2JS52 829 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms