RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 ZFYVE16Q7Z3T8 1539 aa13.05□□□□□ -0.32
SPIDR-225ENST00000524141 TRAPPC8Q9Y2L5 1435 aa13.04□□□□□ -0.32
SPIDR-225ENST00000524141 PCDHB15Q9Y5E8 787 aa13.04□□□□□ -0.32
SPIDR-225ENST00000524141 CCDC27Q2M243 656 aa13.04□□□□□ -0.32
SPIDR-225ENST00000524141 SPAG9O60271 1321 aaKnown RBP13.04□□□□□ -0.32
SPIDR-225ENST00000524141 VWDEQ8N2E2 1590 aa13.03□□□□□ -0.32
SPIDR-225ENST00000524141 FSD2A1L4K1 749 aa13.03□□□□□ -0.32
SPIDR-225ENST00000524141 MCM4P33991 863 aa13.03□□□□□ -0.32
SPIDR-225ENST00000524141 KIF1BO60333 1816 aa13.03□□□□□ -0.32
SPIDR-225ENST00000524141 ARAP3Q8WWN8 1544 aa13.02□□□□□ -0.32
SPIDR-225ENST00000524141 USP32Q8NFA0 1604 aa13.02□□□□□ -0.32
SPIDR-225ENST00000524141 TCP11L2Q8N4U5 519 aa13.02□□□□□ -0.32
SPIDR-225ENST00000524141 MYH16Q9H6N6 1097 aa13.02□□□□□ -0.32
SPIDR-225ENST00000524141 RRAGDQ9NQL2 400 aaPredicted RBP13.02□□□□□ -0.32
SPIDR-225ENST00000524141 CHMP5Q9NZZ3 219 aa13.02□□□□□ -0.32
SPIDR-225ENST00000524141 IFT172Q9UG01 1749 aa13.02□□□□□ -0.33
SPIDR-225ENST00000524141 RLBP1P12271 317 aa13.02□□□□□ -0.33
SPIDR-225ENST00000524141 MORC1Q86VD1 984 aa13.02□□□□□ -0.33
SPIDR-225ENST00000524141 CT47B1P0C2W7 299 aaPredicted RBP13.01□□□□□ -0.33
SPIDR-225ENST00000524141 CFAP70Q5T0N1 1121 aa13.01□□□□□ -0.33
SPIDR-225ENST00000524141 ISY1Q9ULR0 285 aaKnown RBP13.01□□□□□ -0.33
SPIDR-225ENST00000524141 NSD3Q9BZ95 1437 aa13.01□□□□□ -0.33
SPIDR-225ENST00000524141 SETBP1Q9Y6X0 1596 aa13□□□□□ -0.33
SPIDR-225ENST00000524141 MVPQ14764 893 aaKnown RBP13□□□□□ -0.33
SPIDR-225ENST00000524141 ADGRL1O94910 1474 aa13□□□□□ -0.33
SPIDR-225ENST00000524141 XRCC6P12956 609 aaKnown RBP eCLIP13□□□□□ -0.33
SPIDR-225ENST00000524141 NEUROD2Q15784 382 aa13□□□□□ -0.33
SPIDR-225ENST00000524141 CFAP53Q96M91 514 aa13□□□□□ -0.33
SPIDR-225ENST00000524141 NRXN1Q9ULB1 1477 aa13□□□□□ -0.33
SPIDR-225ENST00000524141 C22orf23Q9BZE7 217 aa12.99□□□□□ -0.33
SPIDR-225ENST00000524141 DDX11L8A8MPP1 907 aa12.99□□□□□ -0.33
SPIDR-225ENST00000524141 ZNF518AQ6AHZ1 1483 aa12.99□□□□□ -0.33
SPIDR-225ENST00000524141 ZCCHC11Q5TAX3 1644 aaKnown RBP12.99□□□□□ -0.33
SPIDR-225ENST00000524141 MRE11P49959 708 aa12.98□□□□□ -0.33
SPIDR-225ENST00000524141 ZKSCAN2Q63HK3 967 aa12.98□□□□□ -0.33
SPIDR-225ENST00000524141 FTSJ3Q8IY81 847 aaKnown RBP12.98□□□□□ -0.33
SPIDR-225ENST00000524141 CHD1O14646 1710 aa12.98□□□□□ -0.33
SPIDR-225ENST00000524141 CLCN1P35523 988 aa12.98□□□□□ -0.33
SPIDR-225ENST00000524141 RRP7AQ9Y3A4 280 aaKnown RBP12.98□□□□□ -0.33
SPIDR-225ENST00000524141 ZC3H13Q5T200 1668 aaKnown RBP12.98□□□□□ -0.33
SPIDR-225ENST00000524141 ADGRF5Q8IZF2 1346 aa12.97□□□□□ -0.33
SPIDR-225ENST00000524141 TRAK2O60296 914 aa12.97□□□□□ -0.33
SPIDR-225ENST00000524141 DZIP1LQ8IYY4 767 aaKnown RBP12.97□□□□□ -0.33
SPIDR-225ENST00000524141 PNNQ9H307 717 aaKnown RBP12.97□□□□□ -0.33
SPIDR-225ENST00000524141 INO80Q9ULG1 1556 aaPredicted RBP12.97□□□□□ -0.33
SPIDR-225ENST00000524141 HDAC1Q13547 482 aaPredicted RBP12.97□□□□□ -0.33
SPIDR-225ENST00000524141 HSCBQ8IWL3 235 aa12.97□□□□□ -0.33
SPIDR-225ENST00000524141 BCL2L13Q9BXK5 485 aa12.97□□□□□ -0.33
SPIDR-225ENST00000524141 ATP7AQ04656 1500 aa12.96□□□□□ -0.33
SPIDR-225ENST00000524141 ADGRB2O60241 1585 aa12.96□□□□□ -0.33
SPIDR-225ENST00000524141 QRICH2Q9H0J4 1663 aa12.96□□□□□ -0.34
SPIDR-225ENST00000524141 TNNQ9UQP3 1299 aa12.96□□□□□ -0.34
SPIDR-225ENST00000524141 NSD2O96028 1365 aa12.95□□□□□ -0.34
SPIDR-225ENST00000524141 UHRF1BP1LA0JNW5 1464 aa12.95□□□□□ -0.34
SPIDR-225ENST00000524141 EFCAB6Q5THR3 1501 aa12.95□□□□□ -0.34
SPIDR-225ENST00000524141 MFAP1P55081 439 aaKnown RBP12.95□□□□□ -0.34
SPIDR-225ENST00000524141 GLIPR1L2Q4G1C9 344 aa12.94□□□□□ -0.34
SPIDR-225ENST00000524141 DDX19BQ9UMR2 479 aa12.94□□□□□ -0.34
SPIDR-225ENST00000524141 AFAP1Q8N556 730 aa12.94□□□□□ -0.34
SPIDR-225ENST00000524141 GZF1Q9H116 711 aaPredicted RBP12.94□□□□□ -0.34
SPIDR-225ENST00000524141 NCOA3Q9Y6Q9 1424 aa12.94□□□□□ -0.34
SPIDR-225ENST00000524141 MROH2AA6NES4 1674 aa12.94□□□□□ -0.34
SPIDR-225ENST00000524141 UGGT1Q9NYU2 1555 aa12.94□□□□□ -0.34
SPIDR-225ENST00000524141 TNNT2P45379 298 aaPredicted RBP12.93□□□□□ -0.34
SPIDR-225ENST00000524141 MTHFSP49914 203 aa12.93□□□□□ -0.34
SPIDR-225ENST00000524141 SPRYD3Q8NCJ5 442 aa12.93□□□□□ -0.34
SPIDR-225ENST00000524141 ARXQ96QS3 562 aa12.93□□□□□ -0.34
SPIDR-225ENST00000524141 MROH1Q8NDA8 1641 aa12.93□□□□□ -0.34
SPIDR-225ENST00000524141 PTMSP20962 102 aa12.92□□□□□ -0.34
SPIDR-225ENST00000524141 KIF3BO15066 747 aa12.92□□□□□ -0.34
SPIDR-225ENST00000524141 PANK2Q9BZ23 570 aa12.92□□□□□ -0.34
SPIDR-225ENST00000524141 CIZ1Q9ULV3 898 aaPredicted RBP12.92□□□□□ -0.34
SPIDR-225ENST00000524141 FANCAO15360 1455 aa12.92□□□□□ -0.34
SPIDR-225ENST00000524141 ADGRB3O60242 1522 aa12.92□□□□□ -0.34
SPIDR-225ENST00000524141 SMC5Q8IY18 1101 aa12.92□□□□□ -0.34
SPIDR-225ENST00000524141 NAP1L5Q96NT1 182 aaPredicted RBP12.92□□□□□ -0.34
SPIDR-225ENST00000524141 GRPEL1Q9HAV7 217 aa12.92□□□□□ -0.34
SPIDR-225ENST00000524141 SMC4Q9NTJ3 1288 aa12.92□□□□□ -0.34
SPIDR-225ENST00000524141 SNX21Q969T3 373 aa12.91□□□□□ -0.34
SPIDR-225ENST00000524141 PUS7Q96PZ0 661 aaKnown RBP12.91□□□□□ -0.34
SPIDR-225ENST00000524141 ERCC6L2Q5T890 1561 aa12.91□□□□□ -0.34
SPIDR-225ENST00000524141 RBM25P49756 843 aaKnown RBP12.91□□□□□ -0.34
SPIDR-225ENST00000524141 SLC12A5Q9H2X9 1139 aa12.91□□□□□ -0.34
SPIDR-225ENST00000524141 ZNF692Q9BU19 519 aaPredicted RBP12.9□□□□□ -0.34
SPIDR-225ENST00000524141 ABCC11Q96J66 1382 aa12.9□□□□□ -0.34
SPIDR-225ENST00000524141 U2AF1L5P0DN76 240 aaPredicted RBP12.9□□□□□ -0.34
SPIDR-225ENST00000524141 TRIM27P14373 513 aa12.9□□□□□ -0.34
SPIDR-225ENST00000524141 U2AF1Q01081 240 aaKnown RBP eCLIP12.9□□□□□ -0.34
SPIDR-225ENST00000524141 ATF7IPQ6VMQ6 1270 aa12.9□□□□□ -0.34
SPIDR-225ENST00000524141 GBP4Q96PP9 640 aa12.9□□□□□ -0.34
SPIDR-225ENST00000524141 NOS1P29475 1434 aa12.9□□□□□ -0.34
SPIDR-225ENST00000524141 LMTK2Q8IWU2 1503 aa12.9□□□□□ -0.35
SPIDR-225ENST00000524141 DDIT3P35638 169 aa12.89□□□□□ -0.35
SPIDR-225ENST00000524141 SKOR2Q2VWA4 1001 aaPredicted RBP12.89□□□□□ -0.35
SPIDR-225ENST00000524141 ITPRIPQ8IWB1 547 aa12.89□□□□□ -0.35
SPIDR-225ENST00000524141 ABCA9Q8IUA7 1624 aa12.89□□□□□ -0.35
SPIDR-225ENST00000524141 PPLO60437 1756 aa12.89□□□□□ -0.35
SPIDR-225ENST00000524141 PPRC1Q5VV67 1664 aaKnown RBP12.89□□□□□ -0.35
SPIDR-225ENST00000524141 ADGRB1O14514 1584 aa12.88□□□□□ -0.35
SPIDR-225ENST00000524141 ANKRD36BQ8N2N9 1353 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms