RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 GOLGA2Q08379 1002 aa12.82□□□□□ -0.36
SPIDR-224ENST00000524126 KDM2AQ9Y2K7 1162 aa12.82□□□□□ -0.36
SPIDR-224ENST00000524126 COG6Q9Y2V7 657 aa12.82□□□□□ -0.36
SPIDR-224ENST00000524126 VGLL3A8MV65 326 aa12.82□□□□□ -0.36
SPIDR-224ENST00000524126 PER1O15534 1290 aaPredicted RBP12.82□□□□□ -0.36
SPIDR-224ENST00000524126 PANK1Q8TE04 598 aa12.82□□□□□ -0.36
SPIDR-224ENST00000524126 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.82□□□□□ -0.36
SPIDR-224ENST00000524126 ZBTB7CA1YPR0 619 aa12.81□□□□□ -0.36
SPIDR-224ENST00000524126 RSPH4AQ5TD94 716 aa12.81□□□□□ -0.36
SPIDR-224ENST00000524126 ANP32BQ92688 251 aaKnown RBP12.81□□□□□ -0.36
SPIDR-224ENST00000524126 CCDC94Q9BW85 323 aaPredicted RBP12.81□□□□□ -0.36
SPIDR-224ENST00000524126 RTEL1-TNFRSF6BF6WH68 1400 aa12.81□□□□□ -0.36
SPIDR-224ENST00000524126 DYNC1I1O14576 645 aa12.8□□□□□ -0.36
SPIDR-224ENST00000524126 CLUAP1Q96AJ1 413 aa12.8□□□□□ -0.36
SPIDR-224ENST00000524126 C22orf23Q9BZE7 217 aa12.8□□□□□ -0.36
SPIDR-224ENST00000524126 TMEM51Q9NW97 253 aa12.8□□□□□ -0.36
SPIDR-224ENST00000524126 MAST1Q9Y2H9 1570 aa12.8□□□□□ -0.36
SPIDR-224ENST00000524126 ZFYVE16Q7Z3T8 1539 aa12.8□□□□□ -0.36
SPIDR-224ENST00000524126 CBX1P83916 185 aa12.79□□□□□ -0.36
SPIDR-224ENST00000524126 PANK3Q9H999 370 aa12.79□□□□□ -0.36
SPIDR-224ENST00000524126 RALGAPBQ86X10 1494 aa12.79□□□□□ -0.36
SPIDR-224ENST00000524126 FAM135AQ9P2D6 1515 aa12.79□□□□□ -0.36
SPIDR-224ENST00000524126 SLFN5Q08AF3 891 aa12.79□□□□□ -0.36
SPIDR-224ENST00000524126 MTERF4Q7Z6M4 381 aaKnown RBP12.79□□□□□ -0.36
SPIDR-224ENST00000524126 HSCBQ8IWL3 235 aa12.79□□□□□ -0.36
SPIDR-224ENST00000524126 TSC1Q92574 1164 aa12.79□□□□□ -0.36
SPIDR-224ENST00000524126 FOXD4L1Q9NU39 408 aa12.79□□□□□ -0.36
SPIDR-224ENST00000524126 PDZRN3Q9UPQ7 1066 aa12.79□□□□□ -0.36
SPIDR-224ENST00000524126 ZNF521Q96K83 1311 aa12.79□□□□□ -0.36
SPIDR-224ENST00000524126 TSPOAP1O95153 1857 aa12.78□□□□□ -0.36
SPIDR-224ENST00000524126 PLXNC1O60486 1568 aa12.78□□□□□ -0.36
SPIDR-224ENST00000524126 DDIT3P35638 169 aa12.77□□□□□ -0.36
SPIDR-224ENST00000524126 FAM69CQ0P6D2 419 aa12.77□□□□□ -0.36
SPIDR-224ENST00000524126 ZNF500O60304 480 aaPredicted RBP12.77□□□□□ -0.37
SPIDR-224ENST00000524126 CCDC146Q8IYE0 955 aa12.77□□□□□ -0.37
SPIDR-224ENST00000524126 PLCD3Q8N3E9 789 aa12.77□□□□□ -0.37
SPIDR-224ENST00000524126 NOL7Q9UMY1 257 aaKnown RBP12.77□□□□□ -0.37
SPIDR-224ENST00000524126 INSRP06213 1382 aa12.76□□□□□ -0.37
SPIDR-224ENST00000524126 KIF3BO15066 747 aa12.76□□□□□ -0.37
SPIDR-224ENST00000524126 ZBTB22O15209 634 aa12.76□□□□□ -0.37
SPIDR-224ENST00000524126 RGL3Q3MIN7 710 aa12.76□□□□□ -0.37
SPIDR-224ENST00000524126 AMER1Q5JTC6 1135 aaPredicted RBP12.76□□□□□ -0.37
SPIDR-224ENST00000524126 ZNF830Q96NB3 372 aaPredicted RBP12.76□□□□□ -0.37
SPIDR-224ENST00000524126 ATP7AQ04656 1500 aa12.76□□□□□ -0.37
SPIDR-224ENST00000524126 ARAP3Q8WWN8 1544 aa12.76□□□□□ -0.37
SPIDR-224ENST00000524126 IPO4Q8TEX9 1081 aaKnown RBP12.75□□□□□ -0.37
SPIDR-224ENST00000524126 GBP4Q96PP9 640 aa12.75□□□□□ -0.37
SPIDR-224ENST00000524126 PCDHB15Q9Y5E8 787 aa12.75□□□□□ -0.37
SPIDR-224ENST00000524126 DUOX2Q9NRD8 1548 aa12.75□□□□□ -0.37
SPIDR-224ENST00000524126 CGNL1Q0VF96 1302 aa12.75□□□□□ -0.37
SPIDR-224ENST00000524126 TNNT2P45379 298 aaPredicted RBP12.75□□□□□ -0.37
SPIDR-224ENST00000524126 SASS6Q6UVJ0 657 aa12.75□□□□□ -0.37
SPIDR-224ENST00000524126 WDR43Q15061 677 aaKnown RBP eCLIP12.75□□□□□ -0.37
SPIDR-224ENST00000524126 SKOR2Q2VWA4 1001 aaPredicted RBP12.75□□□□□ -0.37
SPIDR-224ENST00000524126 TNNQ9UQP3 1299 aa12.75□□□□□ -0.37
SPIDR-224ENST00000524126 KIDINS220Q9ULH0 1771 aa12.74□□□□□ -0.37
SPIDR-224ENST00000524126 IGSF3O75054 1194 aa12.74□□□□□ -0.37
SPIDR-224ENST00000524126 DMRT2Q9Y5R5 561 aa12.74□□□□□ -0.37
SPIDR-224ENST00000524126 PLA2R1Q13018 1463 aa12.74□□□□□ -0.37
SPIDR-224ENST00000524126 INO80Q9ULG1 1556 aaPredicted RBP12.74□□□□□ -0.37
SPIDR-224ENST00000524126 NCLP19338 710 aaKnown RBP12.74□□□□□ -0.37
SPIDR-224ENST00000524126 RAB3GAP1Q15042 981 aa12.74□□□□□ -0.37
SPIDR-224ENST00000524126 ATP2B3Q16720 1220 aa12.74□□□□□ -0.37
SPIDR-224ENST00000524126 KDM5DQ9BY66 1539 aa12.74□□□□□ -0.37
SPIDR-224ENST00000524126 NCOA3Q9Y6Q9 1424 aa12.73□□□□□ -0.37
SPIDR-224ENST00000524126 PAXIP1Q6ZW49 1069 aaPredicted RBP12.73□□□□□ -0.37
SPIDR-224ENST00000524126 UHRF1BP1Q6BDS2 1440 aa12.73□□□□□ -0.37
SPIDR-224ENST00000524126 UNC13BO14795 1591 aa12.73□□□□□ -0.37
SPIDR-224ENST00000524126 FAM177BA6PVY3 158 aa12.73□□□□□ -0.37
SPIDR-224ENST00000524126 NKTRP30414 1462 aaKnown RBP12.72□□□□□ -0.37
SPIDR-224ENST00000524126 TRMT2AQ8IZ69 625 aaKnown RBP12.72□□□□□ -0.37
SPIDR-224ENST00000524126 ZNF710Q8N1W2 664 aa12.72□□□□□ -0.37
SPIDR-224ENST00000524126 SSFA2P28290 1259 aa12.72□□□□□ -0.37
SPIDR-224ENST00000524126 GTPBP4Q9BZE4 634 aaKnown RBP12.72□□□□□ -0.37
SPIDR-224ENST00000524126 RBSNQ9H1K0 784 aa12.72□□□□□ -0.37
SPIDR-224ENST00000524126 ZKSCAN5Q9Y2L8 839 aa12.72□□□□□ -0.37
SPIDR-224ENST00000524126 DDX49Q9Y6V7 483 aaKnown RBP12.72□□□□□ -0.37
SPIDR-224ENST00000524126 KIF20AO95235 890 aa12.71□□□□□ -0.37
SPIDR-224ENST00000524126 HSP90AB1P08238 724 aaKnown RBP12.71□□□□□ -0.37
SPIDR-224ENST00000524126 TAF7LQ5H9L4 462 aa12.71□□□□□ -0.37
SPIDR-224ENST00000524126 ERBINQ96RT1 1412 aa12.71□□□□□ -0.38
SPIDR-224ENST00000524126 MAPK8IP2Q13387 824 aaPredicted RBP12.7□□□□□ -0.38
SPIDR-224ENST00000524126 GGT6Q6P531 493 aa12.7□□□□□ -0.38
SPIDR-224ENST00000524126 POGZQ7Z3K3 1410 aa12.7□□□□□ -0.38
SPIDR-224ENST00000524126 CFAP65Q6ZU64 1925 aaKnown RBP12.7□□□□□ -0.38
SPIDR-224ENST00000524126 SPDYE4A6NLX3 237 aa12.7□□□□□ -0.38
SPIDR-224ENST00000524126 PDE3AQ14432 1141 aa12.7□□□□□ -0.38
SPIDR-224ENST00000524126 CSPP1Q1MSJ5 1256 aa12.7□□□□□ -0.38
SPIDR-224ENST00000524126 HS1BP3Q53T59 392 aa12.7□□□□□ -0.38
SPIDR-224ENST00000524126 APAF1O14727 1248 aa12.69□□□□□ -0.38
SPIDR-224ENST00000524126 LETM1O95202 739 aaPredicted RBP12.69□□□□□ -0.38
SPIDR-224ENST00000524126 SMC5Q8IY18 1101 aa12.69□□□□□ -0.38
SPIDR-224ENST00000524126 PMFBP1Q8TBY8 1022 aa12.69□□□□□ -0.38
SPIDR-224ENST00000524126 PDLIM2Q96JY6 352 aa12.69□□□□□ -0.38
SPIDR-224ENST00000524126 IQGAP3Q86VI3 1631 aa12.69□□□□□ -0.38
SPIDR-224ENST00000524126 ZNF518AQ6AHZ1 1483 aa12.69□□□□□ -0.38
SPIDR-224ENST00000524126 DISP3Q9P2K9 1392 aa12.69□□□□□ -0.38
SPIDR-224ENST00000524126 RLBP1P12271 317 aa12.69□□□□□ -0.38
SPIDR-224ENST00000524126 MAP3K4Q9Y6R4 1608 aa12.69□□□□□ -0.38
SPIDR-224ENST00000524126 DIP2BQ9P265 1576 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms