RNA–Protein interactions for RNA: ENST00000524074.1

PFDN1-207, Transcript of prefoldin subunit 1, humanhuman

TSL 5 BASIC

Gene PFDN1, Length 395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-207ENST00000524074 TRIM6-TRIM34B2RNG4 842 aa14.27□□□□□ -0.13
PFDN1-207ENST00000524074 RIMBP2O15034 1052 aa14.27□□□□□ -0.13
PFDN1-207ENST00000524074 PTPREP23469 700 aa14.27□□□□□ -0.13
PFDN1-207ENST00000524074 SND1Q7KZF4 910 aaKnown RBP eCLIP14.27□□□□□ -0.13
PFDN1-207ENST00000524074 ATG7O95352 703 aa14.26□□□□□ -0.13
PFDN1-207ENST00000524074 LRRN4Q8WUT4 740 aa14.26□□□□□ -0.13
PFDN1-207ENST00000524074 PCDHGC3Q9UN70 934 aa14.26□□□□□ -0.13
PFDN1-207ENST00000524074 AMOTL2Q9Y2J4 779 aa14.26□□□□□ -0.13
PFDN1-207ENST00000524074 UCN2Q96RP3 112 aa14.25□□□□□ -0.13
PFDN1-207ENST00000524074 PSDA5PKW4 1024 aaPredicted RBP14.24□□□□□ -0.13
PFDN1-207ENST00000524074 GUCA2AQ02747 115 aa14.24□□□□□ -0.13
PFDN1-207ENST00000524074 SEMA3FQ13275 785 aa14.23□□□□□ -0.13
PFDN1-207ENST00000524074 CDCA8Q53HL2 280 aa14.23□□□□□ -0.13
PFDN1-207ENST00000524074 ZSWIM6Q9HCJ5 1215 aa14.23□□□□□ -0.13
PFDN1-207ENST00000524074 MYT1LQ9UL68 1186 aa14.23□□□□□ -0.13
PFDN1-207ENST00000524074 SMAPO00193 183 aa14.22□□□□□ -0.13
PFDN1-207ENST00000524074 PRR7Q8TB68 274 aa14.22□□□□□ -0.13
PFDN1-207ENST00000524074 LHX6Q9UPM6 363 aa14.22□□□□□ -0.13
PFDN1-207ENST00000524074 TMEM88BA6NKF7 163 aa14.21□□□□□ -0.13
PFDN1-207ENST00000524074 B4GALNT3Q6L9W6 998 aa14.21□□□□□ -0.13
PFDN1-207ENST00000524074 PNMA1Q8ND90 353 aa14.2□□□□□ -0.14
PFDN1-207ENST00000524074 HLA-CQ95604 372 aa14.2□□□□□ -0.14
PFDN1-207ENST00000524074 MAFBQ9Y5Q3 323 aaPredicted RBP14.2□□□□□ -0.14
PFDN1-207ENST00000524074 CFAP99D6REC4 459 aa14.18□□□□□ -0.14
PFDN1-207ENST00000524074 C6orf229H3BNL8 230 aa14.18□□□□□ -0.14
PFDN1-207ENST00000524074 EPS8L1Q8TE68 723 aa14.18□□□□□ -0.14
PFDN1-207ENST00000524074 GPR153Q6NV75 609 aa14.17□□□□□ -0.14
PFDN1-207ENST00000524074 GRIPAP1Q4V328 841 aa14.16□□□□□ -0.14
PFDN1-207ENST00000524074 IGSF3O75054 1194 aa14.15□□□□□ -0.14
PFDN1-207ENST00000524074 EIF4G2P78344 907 aaKnown RBP eCLIP14.15□□□□□ -0.14
PFDN1-207ENST00000524074 SLF2Q8IX21 1173 aa14.15□□□□□ -0.14
PFDN1-207ENST00000524074 HOXB3P14651 431 aaPredicted RBP14.14□□□□□ -0.15
PFDN1-207ENST00000524074 TBC1D9Q6ZT07 1266 aa14.14□□□□□ -0.15
PFDN1-207ENST00000524074 ATP9BO43861 1147 aa14.13□□□□□ -0.15
PFDN1-207ENST00000524074 SLC10A3P09131 477 aa14.13□□□□□ -0.15
PFDN1-207ENST00000524074 GNEQ9Y223 722 aaKnown RBP14.13□□□□□ -0.15
PFDN1-207ENST00000524074 PROX2Q3B8N5 592 aa14.12□□□□□ -0.15
PFDN1-207ENST00000524074 NR6A1Q15406 480 aa14.11□□□□□ -0.15
PFDN1-207ENST00000524074 SWT1Q5T5J6 900 aaKnown RBP14.11□□□□□ -0.15
PFDN1-207ENST00000524074 LOC105371045A0A1W2PR82 267 aa14.1□□□□□ -0.15
PFDN1-207ENST00000524074 SLC4A3P48751 1232 aa14.1□□□□□ -0.15
PFDN1-207ENST00000524074 KCNH8Q96L42 1107 aa14.08□□□□□ -0.16
PFDN1-207ENST00000524074 CCER1Q8TC90 406 aaPredicted RBP14.07□□□□□ -0.16
PFDN1-207ENST00000524074 HDGFP51858 240 aaKnown RBP14.06□□□□□ -0.16
PFDN1-207ENST00000524074 FUT2Q10981 343 aa14.06□□□□□ -0.16
PFDN1-207ENST00000524074 ELOAQ14241 798 aaKnown RBP14.06□□□□□ -0.16
PFDN1-207ENST00000524074 KIAA1468Q9P260 1216 aa14.06□□□□□ -0.16
PFDN1-207ENST00000524074 KCNK17Q96T54 332 aa14.04□□□□□ -0.16
PFDN1-207ENST00000524074 SHROOM4Q9ULL8 1493 aa14.04□□□□□ -0.16
PFDN1-207ENST00000524074 NR1H3Q13133 447 aa14.03□□□□□ -0.16
PFDN1-207ENST00000524074 KANK4Q5T7N3 995 aaPredicted RBP14.03□□□□□ -0.16
PFDN1-207ENST00000524074 TMEM164Q5U3C3 297 aa14.03□□□□□ -0.16
PFDN1-207ENST00000524074 PER1O15534 1290 aaPredicted RBP14.02□□□□□ -0.17
PFDN1-207ENST00000524074 SYMPKQ92797 1274 aaKnown RBP14.02□□□□□ -0.17
PFDN1-207ENST00000524074 CFHP08603 1231 aa14□□□□□ -0.17
PFDN1-207ENST00000524074 ATP6V1AP38606 617 aa14□□□□□ -0.17
PFDN1-207ENST00000524074 STK32AQ8WU08 396 aa14□□□□□ -0.17
PFDN1-207ENST00000524074 ZMIZ1Q9ULJ6 1067 aa14□□□□□ -0.17
PFDN1-207ENST00000524074 NOVA2Q9UNW9 492 aaKnown RBP14□□□□□ -0.17
PFDN1-207ENST00000524074 POTEIP0CG38 1075 aa13.99□□□□□ -0.17
PFDN1-207ENST00000524074 RETREG3Q86VR2 466 aa13.99□□□□□ -0.17
PFDN1-207ENST00000524074 NFATC2IPQ8NCF5 419 aa13.99□□□□□ -0.17
PFDN1-207ENST00000524074 USP17L3A6NCW0 530 aa13.97□□□□□ -0.17
PFDN1-207ENST00000524074 USP17L4A6NCW7 530 aa13.97□□□□□ -0.17
PFDN1-207ENST00000524074 USP17L2Q6R6M4 530 aa13.97□□□□□ -0.17
PFDN1-207ENST00000524074 USP17L1Q7RTZ2 530 aa13.97□□□□□ -0.17
PFDN1-207ENST00000524074 TXNDC2Q86VQ3 553 aa13.97□□□□□ -0.17
PFDN1-207ENST00000524074 PIK3CDO00329 1044 aa13.96□□□□□ -0.17
PFDN1-207ENST00000524074 ZBED2Q9BTP6 218 aa13.96□□□□□ -0.17
PFDN1-207ENST00000524074 SEPT9Q9UHD8 586 aaPredicted RBP13.96□□□□□ -0.17
PFDN1-207ENST00000524074 RBM47A0AV96 593 aaKnown RBP13.95□□□□□ -0.18
PFDN1-207ENST00000524074 ZBBXA8MT70 800 aa13.95□□□□□ -0.18
PFDN1-207ENST00000524074 FBXO45P0C2W1 286 aa13.95□□□□□ -0.18
PFDN1-207ENST00000524074 SKIP12755 728 aa13.95□□□□□ -0.18
PFDN1-207ENST00000524074 DESI1Q6ICB0 168 aa13.95□□□□□ -0.18
PFDN1-207ENST00000524074 UNCXA6NJT0 531 aa13.93□□□□□ -0.18
PFDN1-207ENST00000524074 USP17L5A8MUK1 530 aa13.93□□□□□ -0.18
PFDN1-207ENST00000524074 ERCC3P19447 782 aa13.93□□□□□ -0.18
PFDN1-207ENST00000524074 ARID4AP29374 1257 aaPredicted RBP13.93□□□□□ -0.18
PFDN1-207ENST00000524074 PLEKHM2Q8IWE5 1019 aa13.93□□□□□ -0.18
PFDN1-207ENST00000524074 RABGEF1Q9UJ41 708 aa13.93□□□□□ -0.18
PFDN1-207ENST00000524074 FAM196BA6NMK8 535 aa13.91□□□□□ -0.18
PFDN1-207ENST00000524074 Q3C1V9 767 aa13.91□□□□□ -0.18
PFDN1-207ENST00000524074 KMT5BQ4FZB7 885 aa13.91□□□□□ -0.18
PFDN1-207ENST00000524074 USP17L15C9J2P7 530 aa13.9□□□□□ -0.18
PFDN1-207ENST00000524074 USP17L10C9JJH3 530 aa13.9□□□□□ -0.18
PFDN1-207ENST00000524074 USP17L13C9JLJ4 530 aa13.9□□□□□ -0.18
PFDN1-207ENST00000524074 USP17L12C9JPN9 530 aa13.9□□□□□ -0.18
PFDN1-207ENST00000524074 USP17L11C9JVI0 530 aa13.9□□□□□ -0.18
PFDN1-207ENST00000524074 USP17L21D6R901 530 aa13.9□□□□□ -0.18
PFDN1-207ENST00000524074 USP17L18D6R9N7 530 aa13.9□□□□□ -0.18
PFDN1-207ENST00000524074 USP17L22D6RA61 530 aa13.9□□□□□ -0.18
PFDN1-207ENST00000524074 USP17L17D6RBQ6 530 aa13.9□□□□□ -0.18
PFDN1-207ENST00000524074 USP17L19D6RCP7 530 aa13.9□□□□□ -0.18
PFDN1-207ENST00000524074 USP17L20D6RJB6 530 aa13.9□□□□□ -0.18
PFDN1-207ENST00000524074 RNF40O75150 1001 aa13.9□□□□□ -0.18
PFDN1-207ENST00000524074 USP17L24Q0WX57 530 aa13.9□□□□□ -0.18
PFDN1-207ENST00000524074 FAM98CQ17RN3 349 aaKnown RBP13.9□□□□□ -0.18
PFDN1-207ENST00000524074 PHLDB3Q6NSJ2 640 aa13.9□□□□□ -0.18
PFDN1-207ENST00000524074 LYPD8Q6UX82 237 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms