RNA–Protein interactions for RNA: ENST00000524032.5

LAMA4-221, Transcript of laminin subunit alpha 4, humanhuman

TSL 4

Gene LAMA4, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-221ENST00000524032 BRICD5Q6PL45 260 aa12.91□□□□□ -0.34
LAMA4-221ENST00000524032 RNF19BQ6ZMZ0 732 aa12.91□□□□□ -0.34
LAMA4-221ENST00000524032 PCDHGC3Q9UN70 934 aa12.91□□□□□ -0.34
LAMA4-221ENST00000524032 NKX2-3Q8TAU0 364 aa12.9□□□□□ -0.34
LAMA4-221ENST00000524032 SKIV2LQ15477 1246 aaKnown RBP12.89□□□□□ -0.35
LAMA4-221ENST00000524032 C6orf229H3BNL8 230 aa12.88□□□□□ -0.35
LAMA4-221ENST00000524032 TUSC1Q2TAM9 212 aa12.88□□□□□ -0.35
LAMA4-221ENST00000524032 GOPCQ9HD26 462 aa12.88□□□□□ -0.35
LAMA4-221ENST00000524032 POLR3EQ9NVU0 708 aa12.88□□□□□ -0.35
LAMA4-221ENST00000524032 LIMD1Q9UGP4 676 aa12.88□□□□□ -0.35
LAMA4-221ENST00000524032 USB1Q9BQ65 265 aaKnown RBP12.87□□□□□ -0.35
LAMA4-221ENST00000524032 GGCXP38435 758 aa12.86□□□□□ -0.35
LAMA4-221ENST00000524032 MTMR2Q13614 643 aa12.86□□□□□ -0.35
LAMA4-221ENST00000524032 CSPP1Q1MSJ5 1256 aa12.86□□□□□ -0.35
LAMA4-221ENST00000524032 MSS51Q4VC12 460 aa12.86□□□□□ -0.35
LAMA4-221ENST00000524032 RETREG3Q86VR2 466 aa12.86□□□□□ -0.35
LAMA4-221ENST00000524032 A0A0G2JS52 829 aa12.85□□□□□ -0.35
LAMA4-221ENST00000524032 PRPF38BQ5VTL8 546 aaKnown RBP12.85□□□□□ -0.35
LAMA4-221ENST00000524032 SLC6A16Q9GZN6 736 aa12.85□□□□□ -0.35
LAMA4-221ENST00000524032 ZBTB3Q9H5J0 574 aa12.85□□□□□ -0.35
LAMA4-221ENST00000524032 PCDHB15Q9Y5E8 787 aa12.85□□□□□ -0.35
LAMA4-221ENST00000524032 SPDYE5A6NIY4 337 aa12.84□□□□□ -0.35
LAMA4-221ENST00000524032 SYMPKQ92797 1274 aaKnown RBP12.84□□□□□ -0.35
LAMA4-221ENST00000524032 PCMTD1Q96MG8 357 aaPredicted RBP12.83□□□□□ -0.36
LAMA4-221ENST00000524032 ATP1B4Q9UN42 357 aaPredicted RBP12.83□□□□□ -0.36
LAMA4-221ENST00000524032 S1PR4O95977 384 aa12.82□□□□□ -0.36
LAMA4-221ENST00000524032 HRCP23327 699 aa12.81□□□□□ -0.36
LAMA4-221ENST00000524032 PPP1R18Q6NYC8 613 aa12.81□□□□□ -0.36
LAMA4-221ENST00000524032 FAM160A2Q8N612 972 aaPredicted RBP12.81□□□□□ -0.36
LAMA4-221ENST00000524032 QPCTQ16769 361 aa12.8□□□□□ -0.36
LAMA4-221ENST00000524032 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.8□□□□□ -0.36
LAMA4-221ENST00000524032 NUTM2BA6NNL0 878 aaPredicted RBP12.79□□□□□ -0.36
LAMA4-221ENST00000524032 NUTM2EB1AL46 878 aaPredicted RBP12.79□□□□□ -0.36
LAMA4-221ENST00000524032 LILRB3O75022 631 aa12.79□□□□□ -0.36
LAMA4-221ENST00000524032 NUTM2DQ5VT03 806 aaPredicted RBP12.79□□□□□ -0.36
LAMA4-221ENST00000524032 NUTM2AQ8IVF1 878 aaPredicted RBP12.79□□□□□ -0.36
LAMA4-221ENST00000524032 PROCA1Q8NCQ7 364 aaPredicted RBP12.79□□□□□ -0.36
LAMA4-221ENST00000524032 CABLES1Q8TDN4 633 aa12.79□□□□□ -0.36
LAMA4-221ENST00000524032 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.79□□□□□ -0.36
LAMA4-221ENST00000524032 PRDM9Q9NQV7 894 aa12.79□□□□□ -0.36
LAMA4-221ENST00000524032 ZCCHC6Q5VYS8 1495 aaKnown RBP12.78□□□□□ -0.36
LAMA4-221ENST00000524032 PRR7Q8TB68 274 aa12.77□□□□□ -0.37
LAMA4-221ENST00000524032 MMP16P51512 607 aa12.76□□□□□ -0.37
LAMA4-221ENST00000524032 RNF223E7ERA6 249 aa12.75□□□□□ -0.37
LAMA4-221ENST00000524032 DXOO77932 396 aaKnown RBP12.75□□□□□ -0.37
LAMA4-221ENST00000524032 JUNDP17535 347 aa12.75□□□□□ -0.37
LAMA4-221ENST00000524032 ANKLE1Q8NAG6 615 aa12.74□□□□□ -0.37
LAMA4-221ENST00000524032 CFAP99D6REC4 459 aa12.73□□□□□ -0.37
LAMA4-221ENST00000524032 DESI1Q6ICB0 168 aa12.73□□□□□ -0.37
LAMA4-221ENST00000524032 RTL5Q5HYW3 569 aaPredicted RBP12.72□□□□□ -0.37
LAMA4-221ENST00000524032 PPP2R2DQ66LE6 453 aa12.72□□□□□ -0.37
LAMA4-221ENST00000524032 HELBQ8NG08 1087 aaPredicted RBP12.71□□□□□ -0.37
LAMA4-221ENST00000524032 FCF1Q9Y324 198 aaKnown RBP12.71□□□□□ -0.37
LAMA4-221ENST00000524032 PPEF1O14829 653 aaPredicted RBP12.7□□□□□ -0.38
LAMA4-221ENST00000524032 TMEM132AQ24JP5 1023 aa12.7□□□□□ -0.38
LAMA4-221ENST00000524032 TSC1Q92574 1164 aa12.69□□□□□ -0.38
LAMA4-221ENST00000524032 ABCC9O60706 1549 aa12.68□□□□□ -0.38
LAMA4-221ENST00000524032 RGS20O76081 388 aa12.67□□□□□ -0.38
LAMA4-221ENST00000524032 PTPRNQ16849 979 aa12.67□□□□□ -0.38
LAMA4-221ENST00000524032 RFC5P40937 340 aa12.66□□□□□ -0.38
LAMA4-221ENST00000524032 FBXO31Q5XUX0 539 aaPredicted RBP12.66□□□□□ -0.38
LAMA4-221ENST00000524032 NUDT12Q9BQG2 462 aa12.66□□□□□ -0.38
LAMA4-221ENST00000524032 DCAF1Q9Y4B6 1507 aa12.66□□□□□ -0.38
LAMA4-221ENST00000524032 CCNYL3P0C7X3 344 aa12.65□□□□□ -0.38
LAMA4-221ENST00000524032 LYPD8Q6UX82 237 aa12.64□□□□□ -0.39
LAMA4-221ENST00000524032 CCDC24Q8N4L8 307 aa12.63□□□□□ -0.39
LAMA4-221ENST00000524032 PLA2G2CQ5R387 149 aa12.62□□□□□ -0.39
LAMA4-221ENST00000524032 AP1G2O75843 785 aa12.61□□□□□ -0.39
LAMA4-221ENST00000524032 TMEM259Q4ZIN3 620 aa12.6□□□□□ -0.39
LAMA4-221ENST00000524032 PRKD2Q9BZL6 878 aa12.6□□□□□ -0.39
LAMA4-221ENST00000524032 PER1O15534 1290 aaPredicted RBP12.59□□□□□ -0.39
LAMA4-221ENST00000524032 ZBTB24O43167 697 aaPredicted RBP12.59□□□□□ -0.39
LAMA4-221ENST00000524032 V9GY48 417 aaPredicted RBP12.59□□□□□ -0.39
LAMA4-221ENST00000524032 SLC19A1P41440 591 aa12.58□□□□□ -0.4
LAMA4-221ENST00000524032 RPIAP49247 311 aa12.58□□□□□ -0.4
LAMA4-221ENST00000524032 CTDSPL2Q05D32 466 aa12.58□□□□□ -0.4
LAMA4-221ENST00000524032 EVA1BQ9NVM1 165 aa12.58□□□□□ -0.4
LAMA4-221ENST00000524032 USP17L8P0C7I0 530 aa12.57□□□□□ -0.4
LAMA4-221ENST00000524032 MYO15BQ96JP2 1530 aa12.57□□□□□ -0.4
LAMA4-221ENST00000524032 F12P00748 615 aaPredicted RBP12.56□□□□□ -0.4
LAMA4-221ENST00000524032 CTHP32929 405 aa12.56□□□□□ -0.4
LAMA4-221ENST00000524032 KCNH2Q12809 1159 aa12.56□□□□□ -0.4
LAMA4-221ENST00000524032 LIAT1Q6ZQX7 453 aa12.55□□□□□ -0.4
LAMA4-221ENST00000524032 EMID1Q96A84 441 aaPredicted RBP12.55□□□□□ -0.4
LAMA4-221ENST00000524032 TRIM32Q13049 653 aa12.53□□□□□ -0.4
LAMA4-221ENST00000524032 BANK1Q8NDB2 785 aa12.53□□□□□ -0.4
LAMA4-221ENST00000524032 UNC93B1Q9H1C4 597 aa12.53□□□□□ -0.4
LAMA4-221ENST00000524032 MAP10Q9P2G4 905 aa12.53□□□□□ -0.4
LAMA4-221ENST00000524032 SPRYD7Q5W111 196 aa12.52□□□□□ -0.41
LAMA4-221ENST00000524032 PTCRAQ6ISU1 281 aaPredicted RBP12.52□□□□□ -0.41
LAMA4-221ENST00000524032 LRRN4Q8WUT4 740 aa12.52□□□□□ -0.41
LAMA4-221ENST00000524032 CD2BP2O95400 341 aaKnown RBP12.51□□□□□ -0.41
LAMA4-221ENST00000524032 ZNF697Q5TEC3 545 aa12.48□□□□□ -0.41
LAMA4-221ENST00000524032 ZNF598Q86UK7 904 aaKnown RBP12.48□□□□□ -0.41
LAMA4-221ENST00000524032 SOCS7O14512 581 aa12.47□□□□□ -0.41
LAMA4-221ENST00000524032 ARMC2Q8NEN0 867 aa12.47□□□□□ -0.41
LAMA4-221ENST00000524032 HMX1Q9NP08 348 aaPredicted RBP12.47□□□□□ -0.41
LAMA4-221ENST00000524032 NACADO15069 1562 aa12.47□□□□□ -0.41
LAMA4-221ENST00000524032 APBB1O00213 710 aa12.45□□□□□ -0.42
LAMA4-221ENST00000524032 WNT7BP56706 349 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms