RNA–Protein interactions for RNA: ENST00000523647.1

SMARCE1P4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 4, humanhuman

BASIC

Gene SMARCE1P4, Length 241 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P4-201ENST00000523647 PLA2G2EQ9NZK7 142 aa8.93□□□□□ -0.98
SMARCE1P4-201ENST00000523647 RNF19BQ6ZMZ0 732 aa8.92□□□□□ -0.98
SMARCE1P4-201ENST00000523647 FMNL1O95466 1100 aaPredicted RBP8.91□□□□□ -0.98
SMARCE1P4-201ENST00000523647 ADH1BP00325 375 aa8.91□□□□□ -0.98
SMARCE1P4-201ENST00000523647 POLR3EQ9NVU0 708 aa8.91□□□□□ -0.98
SMARCE1P4-201ENST00000523647 PRPF38BQ5VTL8 546 aaKnown RBP8.9□□□□□ -0.98
SMARCE1P4-201ENST00000523647 NKX2-3Q8TAU0 364 aa8.9□□□□□ -0.98
SMARCE1P4-201ENST00000523647 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.9□□□□□ -0.98
SMARCE1P4-201ENST00000523647 PCDHB15Q9Y5E8 787 aa8.9□□□□□ -0.98
SMARCE1P4-201ENST00000523647 SPSB2Q99619 263 aa8.89□□□□□ -0.99
SMARCE1P4-201ENST00000523647 MTMR2Q13614 643 aa8.88□□□□□ -0.99
SMARCE1P4-201ENST00000523647 QPCTQ16769 361 aa8.88□□□□□ -0.99
SMARCE1P4-201ENST00000523647 MSS51Q4VC12 460 aa8.88□□□□□ -0.99
SMARCE1P4-201ENST00000523647 RETREG3Q86VR2 466 aa8.88□□□□□ -0.99
SMARCE1P4-201ENST00000523647 PROCA1Q8NCQ7 364 aaPredicted RBP8.88□□□□□ -0.99
SMARCE1P4-201ENST00000523647 SYMPKQ92797 1274 aaKnown RBP8.88□□□□□ -0.99
SMARCE1P4-201ENST00000523647 ARXQ96QS3 562 aa8.88□□□□□ -0.99
SMARCE1P4-201ENST00000523647 C6orf229H3BNL8 230 aa8.87□□□□□ -0.99
SMARCE1P4-201ENST00000523647 LILRB3O75022 631 aa8.87□□□□□ -0.99
SMARCE1P4-201ENST00000523647 HRCP23327 699 aa8.87□□□□□ -0.99
SMARCE1P4-201ENST00000523647 FAM160A2Q8N612 972 aaPredicted RBP8.87□□□□□ -0.99
SMARCE1P4-201ENST00000523647 USB1Q9BQ65 265 aaKnown RBP8.87□□□□□ -0.99
SMARCE1P4-201ENST00000523647 ZBTB3Q9H5J0 574 aa8.87□□□□□ -0.99
SMARCE1P4-201ENST00000523647 SPDYE5A6NIY4 337 aa8.86□□□□□ -0.99
SMARCE1P4-201ENST00000523647 CSPP1Q1MSJ5 1256 aa8.86□□□□□ -0.99
SMARCE1P4-201ENST00000523647 CABLES1Q8TDN4 633 aa8.86□□□□□ -0.99
SMARCE1P4-201ENST00000523647 PCMTD1Q96MG8 357 aaPredicted RBP8.86□□□□□ -0.99
SMARCE1P4-201ENST00000523647 TMEM132AQ24JP5 1023 aa8.85□□□□□ -0.99
SMARCE1P4-201ENST00000523647 A0A0G2JS52 829 aa8.84□□□□□ -0.99
SMARCE1P4-201ENST00000523647 FBXO31Q5XUX0 539 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1P4-201ENST00000523647 PPP2R2DQ66LE6 453 aa8.84□□□□□ -0.99
SMARCE1P4-201ENST00000523647 SLC6A16Q9GZN6 736 aa8.84□□□□□ -0.99
SMARCE1P4-201ENST00000523647 PRDM9Q9NQV7 894 aa8.84□□□□□ -0.99
SMARCE1P4-201ENST00000523647 S1PR4O95977 384 aa8.83□□□□□ -1
SMARCE1P4-201ENST00000523647 MMP16P51512 607 aa8.83□□□□□ -1
SMARCE1P4-201ENST00000523647 CFAP99D6REC4 459 aa8.82□□□□□ -1
SMARCE1P4-201ENST00000523647 DXOO77932 396 aaKnown RBP8.82□□□□□ -1
SMARCE1P4-201ENST00000523647 RTL5Q5HYW3 569 aaPredicted RBP8.82□□□□□ -1
SMARCE1P4-201ENST00000523647 DESI1Q6ICB0 168 aa8.82□□□□□ -1
SMARCE1P4-201ENST00000523647 PRR7Q8TB68 274 aa8.82□□□□□ -1
SMARCE1P4-201ENST00000523647 JUNDP17535 347 aa8.81□□□□□ -1
SMARCE1P4-201ENST00000523647 PPP1R18Q6NYC8 613 aa8.81□□□□□ -1
SMARCE1P4-201ENST00000523647 NUTM2BA6NNL0 878 aaPredicted RBP8.8□□□□□ -1
SMARCE1P4-201ENST00000523647 NUTM2EB1AL46 878 aaPredicted RBP8.8□□□□□ -1
SMARCE1P4-201ENST00000523647 GGCXP38435 758 aa8.8□□□□□ -1
SMARCE1P4-201ENST00000523647 NUTM2DQ5VT03 806 aaPredicted RBP8.8□□□□□ -1
SMARCE1P4-201ENST00000523647 NUTM2AQ8IVF1 878 aaPredicted RBP8.8□□□□□ -1
SMARCE1P4-201ENST00000523647 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.8□□□□□ -1
SMARCE1P4-201ENST00000523647 RNF223E7ERA6 249 aa8.79□□□□□ -1
SMARCE1P4-201ENST00000523647 RFC5P40937 340 aa8.78□□□□□ -1
SMARCE1P4-201ENST00000523647 ANKLE1Q8NAG6 615 aa8.78□□□□□ -1
SMARCE1P4-201ENST00000523647 ATP1B4Q9UN42 357 aaPredicted RBP8.77□□□□□ -1.01
SMARCE1P4-201ENST00000523647 TIMELESSQ9UNS1 1208 aa8.77□□□□□ -1.01
SMARCE1P4-201ENST00000523647 PTPRNQ16849 979 aa8.76□□□□□ -1.01
SMARCE1P4-201ENST00000523647 PPEF1O14829 653 aaPredicted RBP8.75□□□□□ -1.01
SMARCE1P4-201ENST00000523647 LYPD8Q6UX82 237 aa8.75□□□□□ -1.01
SMARCE1P4-201ENST00000523647 HELBQ8NG08 1087 aaPredicted RBP8.75□□□□□ -1.01
SMARCE1P4-201ENST00000523647 FCF1Q9Y324 198 aaKnown RBP8.75□□□□□ -1.01
SMARCE1P4-201ENST00000523647 PLA2G2CQ5R387 149 aa8.73□□□□□ -1.01
SMARCE1P4-201ENST00000523647 NUDT12Q9BQG2 462 aa8.73□□□□□ -1.01
SMARCE1P4-201ENST00000523647 PER1O15534 1290 aaPredicted RBP8.72□□□□□ -1.01
SMARCE1P4-201ENST00000523647 CCNYL3P0C7X3 344 aa8.72□□□□□ -1.01
SMARCE1P4-201ENST00000523647 TMEM259Q4ZIN3 620 aa8.72□□□□□ -1.01
SMARCE1P4-201ENST00000523647 TSC1Q92574 1164 aa8.72□□□□□ -1.01
SMARCE1P4-201ENST00000523647 AP1G2O75843 785 aa8.71□□□□□ -1.02
SMARCE1P4-201ENST00000523647 F12P00748 615 aaPredicted RBP8.71□□□□□ -1.02
SMARCE1P4-201ENST00000523647 CTDSPL2Q05D32 466 aa8.71□□□□□ -1.02
SMARCE1P4-201ENST00000523647 EMID1Q96A84 441 aaPredicted RBP8.71□□□□□ -1.02
SMARCE1P4-201ENST00000523647 RGS20O76081 388 aa8.7□□□□□ -1.02
SMARCE1P4-201ENST00000523647 USP17L8P0C7I0 530 aa8.7□□□□□ -1.02
SMARCE1P4-201ENST00000523647 BANK1Q8NDB2 785 aa8.69□□□□□ -1.02
SMARCE1P4-201ENST00000523647 EVA1BQ9NVM1 165 aa8.69□□□□□ -1.02
SMARCE1P4-201ENST00000523647 LRRN4Q8WUT4 740 aa8.68□□□□□ -1.02
SMARCE1P4-201ENST00000523647 SOCS7O14512 581 aa8.67□□□□□ -1.02
SMARCE1P4-201ENST00000523647 KCNH2Q12809 1159 aa8.67□□□□□ -1.02
SMARCE1P4-201ENST00000523647 LIAT1Q6ZQX7 453 aa8.67□□□□□ -1.02
SMARCE1P4-201ENST00000523647 CCDC24Q8N4L8 307 aa8.67□□□□□ -1.02
SMARCE1P4-201ENST00000523647 MAP10Q9P2G4 905 aa8.67□□□□□ -1.02
SMARCE1P4-201ENST00000523647 RPIAP49247 311 aa8.66□□□□□ -1.02
SMARCE1P4-201ENST00000523647 PTCRAQ6ISU1 281 aaPredicted RBP8.66□□□□□ -1.02
SMARCE1P4-201ENST00000523647 HMX1Q9NP08 348 aaPredicted RBP8.66□□□□□ -1.02
SMARCE1P4-201ENST00000523647 V9GY48 417 aaPredicted RBP8.66□□□□□ -1.02
SMARCE1P4-201ENST00000523647 PRKD2Q9BZL6 878 aa8.65□□□□□ -1.02
SMARCE1P4-201ENST00000523647 SLC19A1P41440 591 aa8.64□□□□□ -1.03
SMARCE1P4-201ENST00000523647 UNC93B1Q9H1C4 597 aa8.64□□□□□ -1.03
SMARCE1P4-201ENST00000523647 CTHP32929 405 aa8.63□□□□□ -1.03
SMARCE1P4-201ENST00000523647 TRIM32Q13049 653 aa8.63□□□□□ -1.03
SMARCE1P4-201ENST00000523647 MTMR14Q8NCE2 650 aa8.63□□□□□ -1.03
SMARCE1P4-201ENST00000523647 GJD4Q96KN9 370 aaPredicted RBP8.63□□□□□ -1.03
SMARCE1P4-201ENST00000523647 ZBTB24O43167 697 aaPredicted RBP8.62□□□□□ -1.03
SMARCE1P4-201ENST00000523647 MCM6Q14566 821 aa8.62□□□□□ -1.03
SMARCE1P4-201ENST00000523647 SPRYD7Q5W111 196 aa8.62□□□□□ -1.03
SMARCE1P4-201ENST00000523647 TRIM34Q9BYJ4 488 aa8.62□□□□□ -1.03
SMARCE1P4-201ENST00000523647 SNRKQ9NRH2 765 aa8.62□□□□□ -1.03
SMARCE1P4-201ENST00000523647 NR6A1Q15406 480 aa8.61□□□□□ -1.03
SMARCE1P4-201ENST00000523647 ERICH6Q7L0X2 663 aa8.6□□□□□ -1.03
SMARCE1P4-201ENST00000523647 EPS8L1Q8TE68 723 aa8.6□□□□□ -1.03
SMARCE1P4-201ENST00000523647 ZNF598Q86UK7 904 aaKnown RBP8.59□□□□□ -1.03
SMARCE1P4-201ENST00000523647 HOMEZQ8IX15 550 aa8.59□□□□□ -1.03
SMARCE1P4-201ENST00000523647 CD2BP2O95400 341 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms