RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 GPCPD1Q9NPB8 672 aa10.51□□□□□ -0.73
SKP1-211ENST00000523359 SALL2Q9Y467 1007 aaPredicted RBP10.51□□□□□ -0.73
SKP1-211ENST00000523359 HLA-CQ95604 372 aa10.5□□□□□ -0.73
SKP1-211ENST00000523359 REPIN1Q9BWE0 567 aaKnown RBP10.5□□□□□ -0.73
SKP1-211ENST00000523359 TNFRSF10AO00220 468 aa10.49□□□□□ -0.73
SKP1-211ENST00000523359 CLCN1P35523 988 aa10.49□□□□□ -0.73
SKP1-211ENST00000523359 IL27Q8NEV9 243 aa10.48□□□□□ -0.73
SKP1-211ENST00000523359 FAM217BQ9NTX9 383 aaPredicted RBP10.48□□□□□ -0.73
SKP1-211ENST00000523359 GDF9O60383 454 aa10.47□□□□□ -0.73
SKP1-211ENST00000523359 PRR20EP86478 221 aa10.47□□□□□ -0.73
SKP1-211ENST00000523359 PRR20CP86479 221 aa10.47□□□□□ -0.73
SKP1-211ENST00000523359 PRR20DP86480 221 aa10.47□□□□□ -0.73
SKP1-211ENST00000523359 PRR20BP86481 221 aa10.47□□□□□ -0.73
SKP1-211ENST00000523359 PRR20AP86496 221 aa10.47□□□□□ -0.73
SKP1-211ENST00000523359 Q3C1V9 767 aa10.47□□□□□ -0.73
SKP1-211ENST00000523359 MSS51Q4VC12 460 aa10.47□□□□□ -0.73
SKP1-211ENST00000523359 GIGYF2Q6Y7W6 1299 aaKnown RBP10.47□□□□□ -0.73
SKP1-211ENST00000523359 FAM117AQ9C073 453 aa10.46□□□□□ -0.73
SKP1-211ENST00000523359 HOXA2O43364 376 aa10.45□□□□□ -0.74
SKP1-211ENST00000523359 USP46P62068 366 aa10.45□□□□□ -0.74
SKP1-211ENST00000523359 GUCA2AQ02747 115 aa10.45□□□□□ -0.74
SKP1-211ENST00000523359 FOXC1Q12948 553 aa10.45□□□□□ -0.74
SKP1-211ENST00000523359 PKDCCQ504Y2 493 aa10.44□□□□□ -0.74
SKP1-211ENST00000523359 MS4A1P11836 297 aa10.43□□□□□ -0.74
SKP1-211ENST00000523359 RPIAP49247 311 aa10.43□□□□□ -0.74
SKP1-211ENST00000523359 USB1Q9BQ65 265 aaKnown RBP10.43□□□□□ -0.74
SKP1-211ENST00000523359 FAM187AA6NFU0 413 aa10.42□□□□□ -0.74
SKP1-211ENST00000523359 PKD2L1Q9P0L9 805 aa10.42□□□□□ -0.74
SKP1-211ENST00000523359 CD2BP2O95400 341 aaKnown RBP10.41□□□□□ -0.74
SKP1-211ENST00000523359 NUTM1Q86Y26 1132 aa10.41□□□□□ -0.74
SKP1-211ENST00000523359 PLEKHG3A1L390 1219 aa10.4□□□□□ -0.74
SKP1-211ENST00000523359 ZBTB24O43167 697 aaPredicted RBP10.4□□□□□ -0.74
SKP1-211ENST00000523359 DGAT1O75907 488 aa10.4□□□□□ -0.74
SKP1-211ENST00000523359 SSTR3P32745 418 aaPredicted RBP10.4□□□□□ -0.74
SKP1-211ENST00000523359 MMP16P51512 607 aa10.4□□□□□ -0.74
SKP1-211ENST00000523359 DDRGK1Q96HY6 314 aa10.4□□□□□ -0.74
SKP1-211ENST00000523359 SYMPKQ92797 1274 aaKnown RBP10.39□□□□□ -0.75
SKP1-211ENST00000523359 GTF3C3Q9Y5Q9 886 aa10.39□□□□□ -0.75
SKP1-211ENST00000523359 MYT1Q01538 1121 aa10.38□□□□□ -0.75
SKP1-211ENST00000523359 DXOO77932 396 aaKnown RBP10.37□□□□□ -0.75
SKP1-211ENST00000523359 CCDC24Q8N4L8 307 aa10.36□□□□□ -0.75
SKP1-211ENST00000523359 TRIM32Q13049 653 aa10.35□□□□□ -0.75
SKP1-211ENST00000523359 ZNF787Q6DD87 383 aa10.35□□□□□ -0.75
SKP1-211ENST00000523359 FDX1P10109 184 aa10.34□□□□□ -0.75
SKP1-211ENST00000523359 SPIRE2Q8WWL2 714 aa10.34□□□□□ -0.75
SKP1-211ENST00000523359 BEGAINQ9BUH8 593 aa10.34□□□□□ -0.75
SKP1-211ENST00000523359 CYP4X1Q8N118 509 aa10.33□□□□□ -0.76
SKP1-211ENST00000523359 PCDHGC3Q9UN70 934 aa10.33□□□□□ -0.76
SKP1-211ENST00000523359 NDUFV2P19404 249 aa10.32□□□□□ -0.76
SKP1-211ENST00000523359 TOR4AQ9NXH8 423 aa10.32□□□□□ -0.76
SKP1-211ENST00000523359 MOXD2PA6NHM9 499 aa10.31□□□□□ -0.76
SKP1-211ENST00000523359 C6orf229H3BNL8 230 aa10.31□□□□□ -0.76
SKP1-211ENST00000523359 ST8SIA5O15466 376 aa10.31□□□□□ -0.76
SKP1-211ENST00000523359 JUNDP17535 347 aa10.31□□□□□ -0.76
SKP1-211ENST00000523359 RETREG3Q86VR2 466 aa10.31□□□□□ -0.76
SKP1-211ENST00000523359 AAASQ9NRG9 546 aa10.29□□□□□ -0.76
SKP1-211ENST00000523359 TTC24A2A3L6 582 aaPredicted RBP10.28□□□□□ -0.76
SKP1-211ENST00000523359 WNT7AO00755 349 aa10.28□□□□□ -0.76
SKP1-211ENST00000523359 POTECB2RU33 542 aa10.27□□□□□ -0.77
SKP1-211ENST00000523359 MRGPRX2Q96LB1 330 aa10.27□□□□□ -0.77
SKP1-211ENST00000523359 NUDT12Q9BQG2 462 aa10.27□□□□□ -0.77
SKP1-211ENST00000523359 SKOR1P84550 965 aa10.24□□□□□ -0.77
SKP1-211ENST00000523359 SH3D19Q5HYK7 790 aa10.24□□□□□ -0.77
SKP1-211ENST00000523359 PTCRAQ6ISU1 281 aaPredicted RBP10.24□□□□□ -0.77
SKP1-211ENST00000523359 TBC1D2Q9BYX2 928 aa10.24□□□□□ -0.77
SKP1-211ENST00000523359 GOPCQ9HD26 462 aa10.24□□□□□ -0.77
SKP1-211ENST00000523359 AVPP01185 164 aa10.23□□□□□ -0.77
SKP1-211ENST00000523359 SNIP1Q8TAD8 396 aaKnown RBP10.23□□□□□ -0.77
SKP1-211ENST00000523359 RSPH6AQ9H0K4 717 aa10.23□□□□□ -0.77
SKP1-211ENST00000523359 MTMR2Q13614 643 aa10.22□□□□□ -0.77
SKP1-211ENST00000523359 RC3H1Q5TC82 1133 aaKnown RBP10.22□□□□□ -0.77
SKP1-211ENST00000523359 MYSM1Q5VVJ2 828 aa10.22□□□□□ -0.77
SKP1-211ENST00000523359 PRR7Q8TB68 274 aa10.22□□□□□ -0.77
SKP1-211ENST00000523359 PCMTD1Q96MG8 357 aaPredicted RBP10.22□□□□□ -0.77
SKP1-211ENST00000523359 DACH1Q9UI36 760 aa10.22□□□□□ -0.77
SKP1-211ENST00000523359 J3QL48 77 aa10.21□□□□□ -0.77
SKP1-211ENST00000523359 AXIN1O15169 862 aa10.21□□□□□ -0.77
SKP1-211ENST00000523359 SMPD1P17405 629 aa10.21□□□□□ -0.77
SKP1-211ENST00000523359 WNT7BP56706 349 aa10.21□□□□□ -0.77
SKP1-211ENST00000523359 SKIV2LQ15477 1246 aaKnown RBP10.21□□□□□ -0.77
SKP1-211ENST00000523359 ZNF775Q96BV0 537 aaPredicted RBP10.21□□□□□ -0.77
SKP1-211ENST00000523359 POLR3EQ9NVU0 708 aa10.21□□□□□ -0.77
SKP1-211ENST00000523359 CCNYL3P0C7X3 344 aa10.2□□□□□ -0.78
SKP1-211ENST00000523359 RSBN1LQ6PCB5 846 aaPredicted RBP10.2□□□□□ -0.78
SKP1-211ENST00000523359 CRIPAKQ8N1N5 446 aa10.2□□□□□ -0.78
SKP1-211ENST00000523359 DIXDC1Q155Q3 683 aa10.19□□□□□ -0.78
SKP1-211ENST00000523359 ATP1B4Q9UN42 357 aaPredicted RBP10.19□□□□□ -0.78
SKP1-211ENST00000523359 PCDHB15Q9Y5E8 787 aa10.19□□□□□ -0.78
SKP1-211ENST00000523359 PTPRNQ16849 979 aa10.18□□□□□ -0.78
SKP1-211ENST00000523359 CTC1Q2NKJ3 1217 aa10.18□□□□□ -0.78
SKP1-211ENST00000523359 PROCA1Q8NCQ7 364 aaPredicted RBP10.18□□□□□ -0.78
SKP1-211ENST00000523359 SPDYE5A6NIY4 337 aa10.17□□□□□ -0.78
SKP1-211ENST00000523359 CLK2P49760 499 aaKnown RBP10.17□□□□□ -0.78
SKP1-211ENST00000523359 TIMELESSQ9UNS1 1208 aa10.17□□□□□ -0.78
SKP1-211ENST00000523359 SPTLC1O15269 473 aa10.16□□□□□ -0.78
SKP1-211ENST00000523359 GJA5P36382 358 aa10.16□□□□□ -0.78
SKP1-211ENST00000523359 CSPP1Q1MSJ5 1256 aa10.16□□□□□ -0.78
SKP1-211ENST00000523359 UNC93B1Q9H1C4 597 aa10.16□□□□□ -0.78
SKP1-211ENST00000523359 EVA1BQ9NVM1 165 aa10.16□□□□□ -0.78
SKP1-211ENST00000523359 SMCPP49901 116 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms