RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 KDM2AQ9Y2K7 1162 aa15.06■□□□□ 0
CTNNA1-235ENST00000522730 PTCH1Q13635 1447 aa15.06■□□□□ 0
CTNNA1-235ENST00000522730 XPCQ01831 940 aaPredicted RBP15.05■□□□□ -0
CTNNA1-235ENST00000522730 SAFB2Q14151 953 aaKnown RBP eCLIP15.05■□□□□ -0
CTNNA1-235ENST00000522730 NALCNQ8IZF0 1738 aa15.05■□□□□ -0
CTNNA1-235ENST00000522730 AFF2P51816 1311 aa15.04■□□□□ -0
CTNNA1-235ENST00000522730 NGLY1Q96IV0 654 aa15.04■□□□□ -0
CTNNA1-235ENST00000522730 LRPPRCP42704 1394 aaKnown RBP15.03■□□□□ -0
CTNNA1-235ENST00000522730 PLEKHH1Q9ULM0 1364 aa15.03■□□□□ -0
CTNNA1-235ENST00000522730 FOXO3O43524 673 aa15.03■□□□□ -0
CTNNA1-235ENST00000522730 RXRBP28702 533 aa15.03■□□□□ -0
CTNNA1-235ENST00000522730 C14orf93Q9H972 538 aaKnown RBP15.03■□□□□ -0
CTNNA1-235ENST00000522730 SETD1AO15047 1707 aaKnown RBP15.03■□□□□ -0
CTNNA1-235ENST00000522730 PNPLA6Q8IY17 1366 aa15.01□□□□□ -0.01
CTNNA1-235ENST00000522730 ABCC11Q96J66 1382 aa15.01□□□□□ -0.01
CTNNA1-235ENST00000522730 QTRT2Q9H974 415 aaKnown RBP15.01□□□□□ -0.01
CTNNA1-235ENST00000522730 POGKQ9P215 609 aa15.01□□□□□ -0.01
CTNNA1-235ENST00000522730 DHX57Q6P158 1386 aaKnown RBP15□□□□□ -0.01
CTNNA1-235ENST00000522730 SHPRHQ149N8 1683 aa15□□□□□ -0.01
CTNNA1-235ENST00000522730 SOS2Q07890 1332 aaPredicted RBP15□□□□□ -0.01
CTNNA1-235ENST00000522730 PLEKHG5O94827 1062 aa15□□□□□ -0.01
CTNNA1-235ENST00000522730 DCAF11Q8TEB1 546 aa15□□□□□ -0.01
CTNNA1-235ENST00000522730 PIK3C2GO75747 1445 aa15□□□□□ -0.01
CTNNA1-235ENST00000522730 YTHDC2Q9H6S0 1430 aaKnown RBP15□□□□□ -0.01
CTNNA1-235ENST00000522730 PRAM1Q96QH2 718 aa14.99□□□□□ -0.01
CTNNA1-235ENST00000522730 NHSL1Q5SYE7 1610 aa14.99□□□□□ -0.01
CTNNA1-235ENST00000522730 NPHP3Q7Z494 1330 aa14.98□□□□□ -0.01
CTNNA1-235ENST00000522730 TRAK1Q9UPV9 953 aa14.98□□□□□ -0.01
CTNNA1-235ENST00000522730 PRAG1Q86YV5 1406 aa14.96□□□□□ -0.01
CTNNA1-235ENST00000522730 SIRT1Q96EB6 747 aa14.96□□□□□ -0.01
CTNNA1-235ENST00000522730 LMOD2Q6P5Q4 547 aa14.95□□□□□ -0.02
CTNNA1-235ENST00000522730 KRT28Q7Z3Y7 464 aa14.95□□□□□ -0.02
CTNNA1-235ENST00000522730 USP21Q9UK80 565 aa14.95□□□□□ -0.02
CTNNA1-235ENST00000522730 IFT172Q9UG01 1749 aa14.95□□□□□ -0.02
CTNNA1-235ENST00000522730 TECPR2O15040 1411 aa14.94□□□□□ -0.02
CTNNA1-235ENST00000522730 HRCP23327 699 aa14.94□□□□□ -0.02
CTNNA1-235ENST00000522730 HIRIP3Q9BW71 556 aaPredicted RBP14.94□□□□□ -0.02
CTNNA1-235ENST00000522730 RBM6P78332 1123 aaKnown RBP14.93□□□□□ -0.02
CTNNA1-235ENST00000522730 PHF8Q9UPP1 1060 aa14.93□□□□□ -0.02
CTNNA1-235ENST00000522730 HAP1P54257 671 aaPredicted RBP14.92□□□□□ -0.02
CTNNA1-235ENST00000522730 PSME1Q06323 249 aa14.92□□□□□ -0.02
CTNNA1-235ENST00000522730 MAPK8IP2Q13387 824 aaPredicted RBP14.92□□□□□ -0.02
CTNNA1-235ENST00000522730 PMFBP1Q8TBY8 1022 aa14.92□□□□□ -0.02
CTNNA1-235ENST00000522730 MINK1Q8N4C8 1332 aaPredicted RBP14.92□□□□□ -0.02
CTNNA1-235ENST00000522730 CDC42BPGQ6DT37 1551 aa14.91□□□□□ -0.02
CTNNA1-235ENST00000522730 UPF1Q92900 1129 aaKnown RBP eCLIP14.91□□□□□ -0.02
CTNNA1-235ENST00000522730 MYOM2P54296 1465 aa14.9□□□□□ -0.02
CTNNA1-235ENST00000522730 NCBP3Q53F19 620 aaKnown RBP14.9□□□□□ -0.02
CTNNA1-235ENST00000522730 NRXN1Q9ULB1 1477 aa14.89□□□□□ -0.03
CTNNA1-235ENST00000522730 CABLES1Q8TDN4 633 aa14.89□□□□□ -0.03
CTNNA1-235ENST00000522730 TRPC5Q9UL62 973 aaPredicted RBP14.89□□□□□ -0.03
CTNNA1-235ENST00000522730 FNBP4Q8N3X1 1017 aaPredicted RBP14.88□□□□□ -0.03
CTNNA1-235ENST00000522730 SPATA31A3Q5VYP0 1347 aa14.88□□□□□ -0.03
CTNNA1-235ENST00000522730 PXDNQ92626 1479 aa14.88□□□□□ -0.03
CTNNA1-235ENST00000522730 LAMC1P11047 1609 aa14.86□□□□□ -0.03
CTNNA1-235ENST00000522730 STAC3Q96MF2 364 aa14.86□□□□□ -0.03
CTNNA1-235ENST00000522730 KNDC1Q76NI1 1749 aa14.86□□□□□ -0.03
CTNNA1-235ENST00000522730 FMN2Q9NZ56 1722 aa14.84□□□□□ -0.03
CTNNA1-235ENST00000522730 WASLO00401 505 aaPredicted RBP14.84□□□□□ -0.03
CTNNA1-235ENST00000522730 NGDNQ8NEJ9 315 aaKnown RBP14.84□□□□□ -0.03
CTNNA1-235ENST00000522730 RGS12O14924 1447 aa14.83□□□□□ -0.03
CTNNA1-235ENST00000522730 PAK3O75914 559 aaPredicted RBP14.83□□□□□ -0.04
CTNNA1-235ENST00000522730 CNKSR2Q8WXI2 1034 aa14.83□□□□□ -0.04
CTNNA1-235ENST00000522730 CCDC9Q9Y3X0 531 aaKnown RBP14.82□□□□□ -0.04
CTNNA1-235ENST00000522730 RGPD8O14715 1765 aaPredicted RBP14.82□□□□□ -0.04
CTNNA1-235ENST00000522730 CDK12Q9NYV4 1490 aaPredicted RBP14.82□□□□□ -0.04
CTNNA1-235ENST00000522730 NEUROD1Q13562 356 aa14.81□□□□□ -0.04
CTNNA1-235ENST00000522730 NBPF1Q3BBV0 1214 aa14.81□□□□□ -0.04
CTNNA1-235ENST00000522730 UNC5CLQ8IV45 518 aa14.81□□□□□ -0.04
CTNNA1-235ENST00000522730 GJD4Q96KN9 370 aaPredicted RBP14.81□□□□□ -0.04
CTNNA1-235ENST00000522730 PRR36Q9H6K5 1346 aa14.81□□□□□ -0.04
CTNNA1-235ENST00000522730 ADGRB1O14514 1584 aa14.81□□□□□ -0.04
CTNNA1-235ENST00000522730 CDK19Q9BWU1 502 aa14.8□□□□□ -0.04
CTNNA1-235ENST00000522730 GPRASP1Q5JY77 1395 aa14.8□□□□□ -0.04
CTNNA1-235ENST00000522730 BCL9LQ86UU0 1499 aa14.8□□□□□ -0.04
CTNNA1-235ENST00000522730 DLC1Q96QB1 1528 aa14.8□□□□□ -0.04
CTNNA1-235ENST00000522730 COL22A1Q8NFW1 1626 aaPredicted RBP14.8□□□□□ -0.04
CTNNA1-235ENST00000522730 ATRNO75882 1429 aa14.79□□□□□ -0.04
CTNNA1-235ENST00000522730 TNS3Q68CZ2 1445 aa14.79□□□□□ -0.04
CTNNA1-235ENST00000522730 NUDT16Q96DE0 195 aaKnown RBP14.79□□□□□ -0.04
CTNNA1-235ENST00000522730 SIN3AQ96ST3 1273 aa14.79□□□□□ -0.04
CTNNA1-235ENST00000522730 KIF1AQ12756 1690 aa14.78□□□□□ -0.04
CTNNA1-235ENST00000522730 SBNO1A3KN83 1393 aa14.78□□□□□ -0.04
CTNNA1-235ENST00000522730 NPM3O75607 178 aaKnown RBP14.78□□□□□ -0.04
CTNNA1-235ENST00000522730 ANKARQ7Z5J8 1434 aa14.77□□□□□ -0.04
CTNNA1-235ENST00000522730 EIF3AQ14152 1382 aaKnown RBP14.77□□□□□ -0.04
CTNNA1-235ENST00000522730 FAM83GA6ND36 823 aa14.77□□□□□ -0.05
CTNNA1-235ENST00000522730 ARHGEF10O15013 1369 aa14.76□□□□□ -0.05
CTNNA1-235ENST00000522730 NUTM2GQ5VZR2 741 aa14.76□□□□□ -0.05
CTNNA1-235ENST00000522730 ATAD2Q6PL18 1390 aa14.75□□□□□ -0.05
CTNNA1-235ENST00000522730 A0A0G2JS52 829 aa14.75□□□□□ -0.05
CTNNA1-235ENST00000522730 MYT1Q01538 1121 aa14.75□□□□□ -0.05
CTNNA1-235ENST00000522730 L3MBTL2Q969R5 705 aa14.75□□□□□ -0.05
CTNNA1-235ENST00000522730 SRPK2P78362 688 aaKnown RBP14.74□□□□□ -0.05
CTNNA1-235ENST00000522730 USP32Q8NFA0 1604 aa14.74□□□□□ -0.05
CTNNA1-235ENST00000522730 BTG4Q9NY30 223 aa14.73□□□□□ -0.05
CTNNA1-235ENST00000522730 VPS72Q15906 364 aa14.72□□□□□ -0.05
CTNNA1-235ENST00000522730 SEPT12Q8IYM1 358 aa14.72□□□□□ -0.05
CTNNA1-235ENST00000522730 CABP2Q9NPB3 220 aa14.72□□□□□ -0.05
CTNNA1-235ENST00000522730 CCDC61Q9Y6R9 512 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms