RNA–Protein interactions for RNA: ENST00000522574.5

TNIP1-215, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 2

Gene TNIP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-215ENST00000522574 SBNO2Q9Y2G9 1366 aa13.24□□□□□ -0.29
TNIP1-215ENST00000522574 NKTRP30414 1462 aaKnown RBP13.23□□□□□ -0.29
TNIP1-215ENST00000522574 PLEKHH1Q9ULM0 1364 aa13.23□□□□□ -0.29
TNIP1-215ENST00000522574 HIRIP3Q9BW71 556 aaPredicted RBP13.23□□□□□ -0.29
TNIP1-215ENST00000522574 NWD1Q149M9 1564 aa13.23□□□□□ -0.29
TNIP1-215ENST00000522574 TMF1P82094 1093 aa13.22□□□□□ -0.29
TNIP1-215ENST00000522574 PUS7Q96PZ0 661 aaKnown RBP13.22□□□□□ -0.29
TNIP1-215ENST00000522574 C19orf44Q9H6X5 657 aa13.22□□□□□ -0.29
TNIP1-215ENST00000522574 XRN1Q8IZH2 1706 aaKnown RBP13.22□□□□□ -0.29
TNIP1-215ENST00000522574 CPS1P31327 1500 aa13.22□□□□□ -0.29
TNIP1-215ENST00000522574 MINK1Q8N4C8 1332 aaPredicted RBP13.21□□□□□ -0.29
TNIP1-215ENST00000522574 KNDC1Q76NI1 1749 aa13.21□□□□□ -0.3
TNIP1-215ENST00000522574 TMEM94Q12767 1356 aa13.21□□□□□ -0.3
TNIP1-215ENST00000522574 EVC2Q86UK5 1308 aa13.21□□□□□ -0.3
TNIP1-215ENST00000522574 CDCA8Q53HL2 280 aa13.2□□□□□ -0.3
TNIP1-215ENST00000522574 RBM33Q96EV2 1170 aaKnown RBP13.2□□□□□ -0.3
TNIP1-215ENST00000522574 WASLO00401 505 aaPredicted RBP13.2□□□□□ -0.3
TNIP1-215ENST00000522574 TOM1O60784 492 aa13.2□□□□□ -0.3
TNIP1-215ENST00000522574 C14orf37Q86TY3 774 aa13.2□□□□□ -0.3
TNIP1-215ENST00000522574 CDK19Q9BWU1 502 aa13.2□□□□□ -0.3
TNIP1-215ENST00000522574 LRRC7Q96NW7 1537 aa13.19□□□□□ -0.3
TNIP1-215ENST00000522574 ZNF316A6NFI3 1004 aaPredicted RBP13.19□□□□□ -0.3
TNIP1-215ENST00000522574 C11orf95C9JLR9 678 aaPredicted RBP13.18□□□□□ -0.3
TNIP1-215ENST00000522574 ARHGEF28Q8N1W1 1705 aaKnown RBP13.17□□□□□ -0.3
TNIP1-215ENST00000522574 STRCP1A6NGW2 1772 aa13.17□□□□□ -0.3
TNIP1-215ENST00000522574 ATF3P18847 181 aa13.17□□□□□ -0.3
TNIP1-215ENST00000522574 ADGRL3Q9HAR2 1447 aa13.16□□□□□ -0.3
TNIP1-215ENST00000522574 CADPS2Q86UW7 1296 aa13.16□□□□□ -0.3
TNIP1-215ENST00000522574 PHF23Q9BUL5 403 aaPredicted RBP13.16□□□□□ -0.3
TNIP1-215ENST00000522574 SRPK2P78362 688 aaKnown RBP13.15□□□□□ -0.3
TNIP1-215ENST00000522574 MSH6P52701 1360 aa13.15□□□□□ -0.3
TNIP1-215ENST00000522574 NUDT16Q96DE0 195 aaKnown RBP13.14□□□□□ -0.31
TNIP1-215ENST00000522574 CABP2Q9NPB3 220 aa13.14□□□□□ -0.31
TNIP1-215ENST00000522574 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.14□□□□□ -0.31
TNIP1-215ENST00000522574 CCDC61Q9Y6R9 512 aa13.13□□□□□ -0.31
TNIP1-215ENST00000522574 KIF7Q2M1P5 1343 aa13.13□□□□□ -0.31
TNIP1-215ENST00000522574 DCCP43146 1447 aa13.13□□□□□ -0.31
TNIP1-215ENST00000522574 WASHC2AQ641Q2 1341 aa13.12□□□□□ -0.31
TNIP1-215ENST00000522574 QRICH2Q9H0J4 1663 aa13.11□□□□□ -0.31
TNIP1-215ENST00000522574 ATAD2Q6PL18 1390 aa13.11□□□□□ -0.31
TNIP1-215ENST00000522574 CCDC7Q96M83 1385 aa13.11□□□□□ -0.31
TNIP1-215ENST00000522574 PIP4K2BP78356 416 aa13.11□□□□□ -0.31
TNIP1-215ENST00000522574 SLAIN2Q9P270 581 aa13.11□□□□□ -0.31
TNIP1-215ENST00000522574 ADGRB2O60241 1585 aa13.11□□□□□ -0.31
TNIP1-215ENST00000522574 TULP4Q9NRJ4 1543 aa13.1□□□□□ -0.31
TNIP1-215ENST00000522574 PLEKHG3A1L390 1219 aa13.09□□□□□ -0.31
TNIP1-215ENST00000522574 NUTM2FA1L443 756 aa13.09□□□□□ -0.31
TNIP1-215ENST00000522574 CABP1Q9NZU7 370 aa13.09□□□□□ -0.31
TNIP1-215ENST00000522574 ANKARQ7Z5J8 1434 aa13.09□□□□□ -0.31
TNIP1-215ENST00000522574 PRR36Q9H6K5 1346 aa13.09□□□□□ -0.31
TNIP1-215ENST00000522574 CDC42BPGQ6DT37 1551 aa13.08□□□□□ -0.31
TNIP1-215ENST00000522574 POLR3GLQ9BT43 218 aa13.08□□□□□ -0.31
TNIP1-215ENST00000522574 SLC12A5Q9H2X9 1139 aa13.08□□□□□ -0.31
TNIP1-215ENST00000522574 RGS17Q9UGC6 210 aaPredicted RBP13.08□□□□□ -0.31
TNIP1-215ENST00000522574 SCAF1Q9H7N4 1312 aaKnown RBP13.08□□□□□ -0.32
TNIP1-215ENST00000522574 NINLQ9Y2I6 1382 aa13.08□□□□□ -0.32
TNIP1-215ENST00000522574 ESCO1Q5FWF5 840 aa13.07□□□□□ -0.32
TNIP1-215ENST00000522574 TMC1Q8TDI8 760 aa13.07□□□□□ -0.32
TNIP1-215ENST00000522574 ZNF692Q9BU19 519 aaPredicted RBP13.07□□□□□ -0.32
TNIP1-215ENST00000522574 C1orf167Q5SNV9 1468 aa13.06□□□□□ -0.32
TNIP1-215ENST00000522574 NALCNQ8IZF0 1738 aa13.06□□□□□ -0.32
TNIP1-215ENST00000522574 ORAI2Q96SN7 254 aa13.06□□□□□ -0.32
TNIP1-215ENST00000522574 TERF2IPQ9NYB0 399 aa13.06□□□□□ -0.32
TNIP1-215ENST00000522574 PHF8Q9UPP1 1060 aa13.06□□□□□ -0.32
TNIP1-215ENST00000522574 XIRP1Q702N8 1843 aaKnown RBP13.05□□□□□ -0.32
TNIP1-215ENST00000522574 MST1RQ04912 1400 aa13.05□□□□□ -0.32
TNIP1-215ENST00000522574 ATP7BP35670 1465 aa13.04□□□□□ -0.32
TNIP1-215ENST00000522574 DDX10Q13206 875 aaKnown RBP13.04□□□□□ -0.32
TNIP1-215ENST00000522574 PANK3Q9H999 370 aa13.04□□□□□ -0.32
TNIP1-215ENST00000522574 PPIP5K1Q6PFW1 1433 aa13.03□□□□□ -0.32
TNIP1-215ENST00000522574 HDGFL2Q7Z4V5 671 aaPredicted RBP13.03□□□□□ -0.32
TNIP1-215ENST00000522574 NGDNQ8NEJ9 315 aaKnown RBP13.03□□□□□ -0.32
TNIP1-215ENST00000522574 PMFBP1Q8TBY8 1022 aa13.03□□□□□ -0.32
TNIP1-215ENST00000522574 ACEP12821 1306 aa13.03□□□□□ -0.32
TNIP1-215ENST00000522574 FMN2Q9NZ56 1722 aa13.02□□□□□ -0.32
TNIP1-215ENST00000522574 BRINP3Q76B58 766 aa13.02□□□□□ -0.33
TNIP1-215ENST00000522574 POLR3AO14802 1390 aaPredicted RBP13.02□□□□□ -0.33
TNIP1-215ENST00000522574 FOXO3O43524 673 aa13.01□□□□□ -0.33
TNIP1-215ENST00000522574 PSME1Q06323 249 aa13.01□□□□□ -0.33
TNIP1-215ENST00000522574 CARD14Q9BXL6 1004 aa13.01□□□□□ -0.33
TNIP1-215ENST00000522574 ANKRD36BQ8N2N9 1353 aa13.01□□□□□ -0.33
TNIP1-215ENST00000522574 CPSF1Q10570 1443 aaKnown RBP13□□□□□ -0.33
TNIP1-215ENST00000522574 PER1O15534 1290 aaPredicted RBP13□□□□□ -0.33
TNIP1-215ENST00000522574 USP32Q8NFA0 1604 aa12.99□□□□□ -0.33
TNIP1-215ENST00000522574 BRD4O60885 1362 aaPredicted RBP12.98□□□□□ -0.33
TNIP1-215ENST00000522574 NPHP3Q7Z494 1330 aa12.98□□□□□ -0.33
TNIP1-215ENST00000522574 KRT28Q7Z3Y7 464 aa12.98□□□□□ -0.33
TNIP1-215ENST00000522574 KNSTRNQ9Y448 316 aa12.98□□□□□ -0.33
TNIP1-215ENST00000522574 CD163L1Q9NR16 1453 aa12.98□□□□□ -0.33
TNIP1-215ENST00000522574 KTN1Q86UP2 1357 aaKnown RBP12.97□□□□□ -0.33
TNIP1-215ENST00000522574 A0A1W2PP64 1363 aa12.97□□□□□ -0.33
TNIP1-215ENST00000522574 SOS2Q07890 1332 aaPredicted RBP12.95□□□□□ -0.34
TNIP1-215ENST00000522574 TTC21BQ7Z4L5 1316 aa12.95□□□□□ -0.34
TNIP1-215ENST00000522574 TTC21AQ8NDW8 1320 aa12.95□□□□□ -0.34
TNIP1-215ENST00000522574 POTEAQ6S8J7 498 aa12.94□□□□□ -0.34
TNIP1-215ENST00000522574 USP6P35125 1406 aa12.94□□□□□ -0.34
TNIP1-215ENST00000522574 EDC4Q6P2E9 1401 aaKnown RBP12.94□□□□□ -0.34
TNIP1-215ENST00000522574 SSH2Q76I76 1423 aa12.94□□□□□ -0.34
TNIP1-215ENST00000522574 CGNL1Q0VF96 1302 aa12.94□□□□□ -0.34
TNIP1-215ENST00000522574 TOPAZ1Q8N9V7 1692 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms