RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 SRPK2P78362 688 aaKnown RBP17.22■□□□□ 0.35
PABPC1-219ENST00000522387 TMF1P82094 1093 aa17.22■□□□□ 0.35
PABPC1-219ENST00000522387 CENPBP07199 599 aaPredicted RBP17.22■□□□□ 0.35
PABPC1-219ENST00000522387 KIF7Q2M1P5 1343 aa17.22■□□□□ 0.35
PABPC1-219ENST00000522387 DDX10Q13206 875 aaKnown RBP17.21■□□□□ 0.35
PABPC1-219ENST00000522387 CNGB1Q14028 1251 aaPredicted RBP17.2■□□□□ 0.34
PABPC1-219ENST00000522387 XRN1Q8IZH2 1706 aaKnown RBP17.2■□□□□ 0.34
PABPC1-219ENST00000522387 TECPR2O15040 1411 aa17.2■□□□□ 0.34
PABPC1-219ENST00000522387 CDK19Q9BWU1 502 aa17.2■□□□□ 0.34
PABPC1-219ENST00000522387 CPS1P31327 1500 aa17.19■□□□□ 0.34
PABPC1-219ENST00000522387 TMEM94Q12767 1356 aa17.19■□□□□ 0.34
PABPC1-219ENST00000522387 TMC1Q8TDI8 760 aa17.18■□□□□ 0.34
PABPC1-219ENST00000522387 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.18■□□□□ 0.34
PABPC1-219ENST00000522387 PTCH1Q13635 1447 aa17.17■□□□□ 0.34
PABPC1-219ENST00000522387 FAM135BQ49AJ0 1406 aa17.17■□□□□ 0.34
PABPC1-219ENST00000522387 EVC2Q86UK5 1308 aa17.17■□□□□ 0.34
PABPC1-219ENST00000522387 DLC1Q96QB1 1528 aa17.17■□□□□ 0.34
PABPC1-219ENST00000522387 KNDC1Q76NI1 1749 aa17.17■□□□□ 0.34
PABPC1-219ENST00000522387 CCDC7Q96M83 1385 aa17.16■□□□□ 0.34
PABPC1-219ENST00000522387 WASLO00401 505 aaPredicted RBP17.15■□□□□ 0.34
PABPC1-219ENST00000522387 SIRT1Q96EB6 747 aa17.15■□□□□ 0.34
PABPC1-219ENST00000522387 TULP4Q9NRJ4 1543 aa17.14■□□□□ 0.33
PABPC1-219ENST00000522387 SLC12A5Q9H2X9 1139 aa17.14■□□□□ 0.33
PABPC1-219ENST00000522387 GTF3C3Q9Y5Q9 886 aa17.13■□□□□ 0.33
PABPC1-219ENST00000522387 NWD1Q149M9 1564 aa17.12■□□□□ 0.33
PABPC1-219ENST00000522387 MIER1Q8N108 512 aa17.12■□□□□ 0.33
PABPC1-219ENST00000522387 NALCNQ8IZF0 1738 aa17.11■□□□□ 0.33
PABPC1-219ENST00000522387 SBNO2Q9Y2G9 1366 aa17.11■□□□□ 0.33
PABPC1-219ENST00000522387 LRRC7Q96NW7 1537 aa17.11■□□□□ 0.33
PABPC1-219ENST00000522387 PMFBP1Q8TBY8 1022 aa17.1■□□□□ 0.33
PABPC1-219ENST00000522387 NUDT16Q96DE0 195 aaKnown RBP17.1■□□□□ 0.33
PABPC1-219ENST00000522387 C19orf44Q9H6X5 657 aa17.1■□□□□ 0.33
PABPC1-219ENST00000522387 CABP1Q9NZU7 370 aa17.1■□□□□ 0.33
PABPC1-219ENST00000522387 NKTRP30414 1462 aaKnown RBP17.1■□□□□ 0.33
PABPC1-219ENST00000522387 PRR36Q9H6K5 1346 aa17.1■□□□□ 0.33
PABPC1-219ENST00000522387 ATF3P18847 181 aa17.09■□□□□ 0.33
PABPC1-219ENST00000522387 CDCA8Q53HL2 280 aa17.09■□□□□ 0.33
PABPC1-219ENST00000522387 ADGRL3Q9HAR2 1447 aa17.08■□□□□ 0.32
PABPC1-219ENST00000522387 ESCO1Q5FWF5 840 aa17.07■□□□□ 0.32
PABPC1-219ENST00000522387 PANK3Q9H999 370 aa17.07■□□□□ 0.32
PABPC1-219ENST00000522387 ORAI2Q96SN7 254 aa17.07■□□□□ 0.32
PABPC1-219ENST00000522387 MSH6P52701 1360 aa17.07■□□□□ 0.32
PABPC1-219ENST00000522387 SLC24A1O60721 1099 aa17.06■□□□□ 0.32
PABPC1-219ENST00000522387 XIRP1Q702N8 1843 aaKnown RBP17.06■□□□□ 0.32
PABPC1-219ENST00000522387 RGPD8O14715 1765 aaPredicted RBP17.06■□□□□ 0.32
PABPC1-219ENST00000522387 YTHDC1Q96MU7 727 aaKnown RBP17.05■□□□□ 0.32
PABPC1-219ENST00000522387 CCDC61Q9Y6R9 512 aa17.04■□□□□ 0.32
PABPC1-219ENST00000522387 XPCQ01831 940 aaPredicted RBP17.03■□□□□ 0.32
PABPC1-219ENST00000522387 DDX17Q92841 729 aaKnown RBP17.03■□□□□ 0.32
PABPC1-219ENST00000522387 PPIP5K1Q6PFW1 1433 aa17.03■□□□□ 0.32
PABPC1-219ENST00000522387 LTBP4Q8N2S1 1624 aa17.03■□□□□ 0.32
PABPC1-219ENST00000522387 ATP7BP35670 1465 aa17.02■□□□□ 0.32
PABPC1-219ENST00000522387 PLEKHG5O94827 1062 aa17.02■□□□□ 0.31
PABPC1-219ENST00000522387 CADPS2Q86UW7 1296 aa17.02■□□□□ 0.31
PABPC1-219ENST00000522387 ATAD2Q6PL18 1390 aa17.01■□□□□ 0.31
PABPC1-219ENST00000522387 NGDNQ8NEJ9 315 aaKnown RBP17.01■□□□□ 0.31
PABPC1-219ENST00000522387 ADGRB2O60241 1585 aa17.01■□□□□ 0.31
PABPC1-219ENST00000522387 FOXO3O43524 673 aa17.01■□□□□ 0.31
PABPC1-219ENST00000522387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17■□□□□ 0.31
PABPC1-219ENST00000522387 ACEP12821 1306 aa17■□□□□ 0.31
PABPC1-219ENST00000522387 USP32Q8NFA0 1604 aa17■□□□□ 0.31
PABPC1-219ENST00000522387 PIP4K2BP78356 416 aa16.99■□□□□ 0.31
PABPC1-219ENST00000522387 CARD14Q9BXL6 1004 aa16.99■□□□□ 0.31
PABPC1-219ENST00000522387 SLAIN2Q9P270 581 aa16.99■□□□□ 0.31
PABPC1-219ENST00000522387 MYOM1P52179 1685 aa16.99■□□□□ 0.31
PABPC1-219ENST00000522387 CDC42BPGQ6DT37 1551 aa16.98■□□□□ 0.31
PABPC1-219ENST00000522387 A0A1W2PP64 1363 aa16.98■□□□□ 0.31
PABPC1-219ENST00000522387 CC2D1BQ5T0F9 858 aaKnown RBP16.98■□□□□ 0.31
PABPC1-219ENST00000522387 FMN2Q9NZ56 1722 aa16.98■□□□□ 0.31
PABPC1-219ENST00000522387 PHF8Q9UPP1 1060 aa16.97■□□□□ 0.31
PABPC1-219ENST00000522387 PAK3O75914 559 aaPredicted RBP16.96■□□□□ 0.31
PABPC1-219ENST00000522387 TERF2IPQ9NYB0 399 aa16.96■□□□□ 0.31
PABPC1-219ENST00000522387 C1orf167Q5SNV9 1468 aa16.96■□□□□ 0.31
PABPC1-219ENST00000522387 MST1RQ04912 1400 aa16.96■□□□□ 0.31
PABPC1-219ENST00000522387 HDGFL2Q7Z4V5 671 aaPredicted RBP16.96■□□□□ 0.3
PABPC1-219ENST00000522387 KNSTRNQ9Y448 316 aa16.96■□□□□ 0.3
PABPC1-219ENST00000522387 NCOA3Q9Y6Q9 1424 aa16.95■□□□□ 0.3
PABPC1-219ENST00000522387 PUS7Q96PZ0 661 aaKnown RBP16.95■□□□□ 0.3
PABPC1-219ENST00000522387 KTN1Q86UP2 1357 aaKnown RBP16.94■□□□□ 0.3
PABPC1-219ENST00000522387 CD163L1Q9NR16 1453 aa16.94■□□□□ 0.3
PABPC1-219ENST00000522387 UBAP1LF5GYI3 381 aa16.94■□□□□ 0.3
PABPC1-219ENST00000522387 PER1O15534 1290 aaPredicted RBP16.94■□□□□ 0.3
PABPC1-219ENST00000522387 PSME1Q06323 249 aa16.94■□□□□ 0.3
PABPC1-219ENST00000522387 NUTM2GQ5VZR2 741 aa16.94■□□□□ 0.3
PABPC1-219ENST00000522387 LMOD2Q6P5Q4 547 aa16.94■□□□□ 0.3
PABPC1-219ENST00000522387 BRINP3Q76B58 766 aa16.93■□□□□ 0.3
PABPC1-219ENST00000522387 CERKQ8TCT0 537 aa16.93■□□□□ 0.3
PABPC1-219ENST00000522387 NSD3Q9BZ95 1437 aa16.93■□□□□ 0.3
PABPC1-219ENST00000522387 TNNT2P45379 298 aaPredicted RBP16.93■□□□□ 0.3
PABPC1-219ENST00000522387 ANKRD36BQ8N2N9 1353 aa16.93■□□□□ 0.3
PABPC1-219ENST00000522387 PLEKHG3A1L390 1219 aa16.92■□□□□ 0.3
PABPC1-219ENST00000522387 ANKARQ7Z5J8 1434 aa16.92■□□□□ 0.3
PABPC1-219ENST00000522387 ZRANB1Q9UGI0 708 aa16.92■□□□□ 0.3
PABPC1-219ENST00000522387 DCCP43146 1447 aa16.91■□□□□ 0.3
PABPC1-219ENST00000522387 GGNBP2Q9H3C7 697 aa16.91■□□□□ 0.3
PABPC1-219ENST00000522387 SOX12O15370 315 aa16.9■□□□□ 0.3
PABPC1-219ENST00000522387 NME9Q86XW9 330 aa16.9■□□□□ 0.3
PABPC1-219ENST00000522387 TOPAZ1Q8N9V7 1692 aa16.89■□□□□ 0.29
PABPC1-219ENST00000522387 NINLQ9Y2I6 1382 aa16.89■□□□□ 0.29
PABPC1-219ENST00000522387 TOM1O60784 492 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms