RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 MINK1Q8N4C8 1332 aaPredicted RBP13.08□□□□□ -0.32
SPARC-205ENST00000522348 NINLQ9Y2I6 1382 aa13.07□□□□□ -0.32
SPARC-205ENST00000522348 HSPA2P54652 639 aa13.07□□□□□ -0.32
SPARC-205ENST00000522348 CDK19Q9BWU1 502 aa13.07□□□□□ -0.32
SPARC-205ENST00000522348 CABP2Q9NPB3 220 aa13.07□□□□□ -0.32
SPARC-205ENST00000522348 QRICH2Q9H0J4 1663 aa13.07□□□□□ -0.32
SPARC-205ENST00000522348 SLIT1O75093 1534 aa13.07□□□□□ -0.32
SPARC-205ENST00000522348 METP08581 1390 aa13.07□□□□□ -0.32
SPARC-205ENST00000522348 ARHGAP23Q9P227 1491 aa13.06□□□□□ -0.32
SPARC-205ENST00000522348 ARHGEF28Q8N1W1 1705 aaKnown RBP13.06□□□□□ -0.32
SPARC-205ENST00000522348 WAPLQ7Z5K2 1190 aa13.06□□□□□ -0.32
SPARC-205ENST00000522348 ATAD2Q6PL18 1390 aa13.06□□□□□ -0.32
SPARC-205ENST00000522348 FAM135BQ49AJ0 1406 aa13.05□□□□□ -0.32
SPARC-205ENST00000522348 TERF2IPQ9NYB0 399 aa13.05□□□□□ -0.32
SPARC-205ENST00000522348 GTF3C3Q9Y5Q9 886 aa13.05□□□□□ -0.32
SPARC-205ENST00000522348 LMTK3Q96Q04 1460 aa13.04□□□□□ -0.32
SPARC-205ENST00000522348 PPP2R1AP30153 589 aa13.04□□□□□ -0.32
SPARC-205ENST00000522348 TECPR2O15040 1411 aa13.04□□□□□ -0.32
SPARC-205ENST00000522348 ADAMTS13Q76LX8 1427 aa13.04□□□□□ -0.32
SPARC-205ENST00000522348 WASLO00401 505 aaPredicted RBP13.03□□□□□ -0.32
SPARC-205ENST00000522348 ANKLE2Q86XL3 938 aa13.03□□□□□ -0.32
SPARC-205ENST00000522348 SCAF1Q9H7N4 1312 aaKnown RBP13.03□□□□□ -0.32
SPARC-205ENST00000522348 ANKRD36BQ8N2N9 1353 aa13.03□□□□□ -0.32
SPARC-205ENST00000522348 TULP4Q9NRJ4 1543 aa13.03□□□□□ -0.32
SPARC-205ENST00000522348 NRXN3Q9Y4C0 1643 aa13.02□□□□□ -0.32
SPARC-205ENST00000522348 HDGFL2Q7Z4V5 671 aaPredicted RBP13.02□□□□□ -0.33
SPARC-205ENST00000522348 SLC26A8Q96RN1 970 aa13.02□□□□□ -0.33
SPARC-205ENST00000522348 CGNL1Q0VF96 1302 aa13.02□□□□□ -0.33
SPARC-205ENST00000522348 MED14O60244 1454 aa13.02□□□□□ -0.33
SPARC-205ENST00000522348 MORC1Q86VD1 984 aa13.01□□□□□ -0.33
SPARC-205ENST00000522348 ZBED9Q6R2W3 1325 aa13.01□□□□□ -0.33
SPARC-205ENST00000522348 INSRP06213 1382 aa13.01□□□□□ -0.33
SPARC-205ENST00000522348 MYOM1P52179 1685 aa13.01□□□□□ -0.33
SPARC-205ENST00000522348 SETD1AO15047 1707 aaKnown RBP13□□□□□ -0.33
SPARC-205ENST00000522348 PLEKHH1Q9ULM0 1364 aa13□□□□□ -0.33
SPARC-205ENST00000522348 CABP1Q9NZU7 370 aa13□□□□□ -0.33
SPARC-205ENST00000522348 AMOTL2Q9Y2J4 779 aa13□□□□□ -0.33
SPARC-205ENST00000522348 NSD3Q9BZ95 1437 aa12.99□□□□□ -0.33
SPARC-205ENST00000522348 NSD2O96028 1365 aa12.99□□□□□ -0.33
SPARC-205ENST00000522348 PIK3R4Q99570 1358 aa12.98□□□□□ -0.33
SPARC-205ENST00000522348 DMRT2Q9Y5R5 561 aa12.98□□□□□ -0.33
SPARC-205ENST00000522348 CEP170BQ9Y4F5 1589 aaPredicted RBP12.98□□□□□ -0.33
SPARC-205ENST00000522348 NUDT16Q96DE0 195 aaKnown RBP12.97□□□□□ -0.33
SPARC-205ENST00000522348 CCDC61Q9Y6R9 512 aa12.97□□□□□ -0.33
SPARC-205ENST00000522348 ROBO2Q9HCK4 1378 aa12.96□□□□□ -0.33
SPARC-205ENST00000522348 WDR43Q15061 677 aaKnown RBP eCLIP12.96□□□□□ -0.33
SPARC-205ENST00000522348 ZNF692Q9BU19 519 aaPredicted RBP12.96□□□□□ -0.33
SPARC-205ENST00000522348 DIP2AQ14689 1571 aa12.95□□□□□ -0.34
SPARC-205ENST00000522348 CPS1P31327 1500 aa12.95□□□□□ -0.34
SPARC-205ENST00000522348 SETD1BQ9UPS6 1966 aaKnown RBP12.95□□□□□ -0.34
SPARC-205ENST00000522348 KNDC1Q76NI1 1749 aa12.95□□□□□ -0.34
SPARC-205ENST00000522348 A0A1W2PP64 1363 aa12.94□□□□□ -0.34
SPARC-205ENST00000522348 PTPRUQ92729 1446 aa12.94□□□□□ -0.34
SPARC-205ENST00000522348 FYB1O15117 783 aa12.93□□□□□ -0.34
SPARC-205ENST00000522348 ADAMTS8Q9UP79 889 aa12.93□□□□□ -0.34
SPARC-205ENST00000522348 POLR3AO14802 1390 aaPredicted RBP12.93□□□□□ -0.34
SPARC-205ENST00000522348 NCKAP5LQ9HCH0 1330 aa12.92□□□□□ -0.34
SPARC-205ENST00000522348 USP32Q8NFA0 1604 aa12.92□□□□□ -0.34
SPARC-205ENST00000522348 CFAP53Q96M91 514 aa12.92□□□□□ -0.34
SPARC-205ENST00000522348 ZNF142P52746 1687 aaPredicted RBP12.92□□□□□ -0.34
SPARC-205ENST00000522348 ATP7BP35670 1465 aa12.91□□□□□ -0.34
SPARC-205ENST00000522348 PTCH1Q13635 1447 aa12.91□□□□□ -0.34
SPARC-205ENST00000522348 PLEKHG3A1L390 1219 aa12.91□□□□□ -0.34
SPARC-205ENST00000522348 PDE3BQ13370 1112 aa12.91□□□□□ -0.34
SPARC-205ENST00000522348 CD163L1Q9NR16 1453 aa12.91□□□□□ -0.34
SPARC-205ENST00000522348 PPIP5K1Q6PFW1 1433 aa12.9□□□□□ -0.34
SPARC-205ENST00000522348 CPSF1Q10570 1443 aaKnown RBP12.89□□□□□ -0.35
SPARC-205ENST00000522348 TNNT2P45379 298 aaPredicted RBP12.89□□□□□ -0.35
SPARC-205ENST00000522348 MTHFSP49914 203 aa12.89□□□□□ -0.35
SPARC-205ENST00000522348 NGEFQ8N5V2 710 aa12.89□□□□□ -0.35
SPARC-205ENST00000522348 GGNBP2Q9H3C7 697 aa12.89□□□□□ -0.35
SPARC-205ENST00000522348 NEFLP07196 543 aa12.88□□□□□ -0.35
SPARC-205ENST00000522348 KCNA6P17658 529 aa12.88□□□□□ -0.35
SPARC-205ENST00000522348 BLMP54132 1417 aaPredicted RBP12.88□□□□□ -0.35
SPARC-205ENST00000522348 NPHP4O75161 1426 aaPredicted RBP12.87□□□□□ -0.35
SPARC-205ENST00000522348 EDC4Q6P2E9 1401 aaKnown RBP12.87□□□□□ -0.35
SPARC-205ENST00000522348 PRR36Q9H6K5 1346 aa12.87□□□□□ -0.35
SPARC-205ENST00000522348 ADGRB2O60241 1585 aa12.86□□□□□ -0.35
SPARC-205ENST00000522348 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.86□□□□□ -0.35
SPARC-205ENST00000522348 NUDCQ9Y266 331 aa12.86□□□□□ -0.35
SPARC-205ENST00000522348 SMG6Q86US8 1419 aaKnown RBP12.86□□□□□ -0.35
SPARC-205ENST00000522348 SUPT16HQ9Y5B9 1047 aaKnown RBP12.85□□□□□ -0.35
SPARC-205ENST00000522348 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.85□□□□□ -0.35
SPARC-205ENST00000522348 ACEP12821 1306 aa12.84□□□□□ -0.35
SPARC-205ENST00000522348 COG3Q96JB2 828 aa12.83□□□□□ -0.36
SPARC-205ENST00000522348 STRCQ7RTU9 1775 aa12.83□□□□□ -0.36
SPARC-205ENST00000522348 NUTM2FA1L443 756 aa12.82□□□□□ -0.36
SPARC-205ENST00000522348 SALL2Q9Y467 1007 aaPredicted RBP12.82□□□□□ -0.36
SPARC-205ENST00000522348 XRN1Q8IZH2 1706 aaKnown RBP12.82□□□□□ -0.36
SPARC-205ENST00000522348 CDC42BPGQ6DT37 1551 aa12.81□□□□□ -0.36
SPARC-205ENST00000522348 ANKARQ7Z5J8 1434 aa12.81□□□□□ -0.36
SPARC-205ENST00000522348 FKBP8Q14318 412 aa12.81□□□□□ -0.36
SPARC-205ENST00000522348 NCBP3Q53F19 620 aaKnown RBP12.81□□□□□ -0.36
SPARC-205ENST00000522348 ERICH6BQ5W0A0 696 aa12.81□□□□□ -0.36
SPARC-205ENST00000522348 NGDNQ8NEJ9 315 aaKnown RBP12.81□□□□□ -0.36
SPARC-205ENST00000522348 RUNDC1Q96C34 613 aa12.81□□□□□ -0.36
SPARC-205ENST00000522348 PNNQ9H307 717 aaKnown RBP12.81□□□□□ -0.36
SPARC-205ENST00000522348 TTC21BQ7Z4L5 1316 aa12.81□□□□□ -0.36
SPARC-205ENST00000522348 NME9Q86XW9 330 aa12.8□□□□□ -0.36
SPARC-205ENST00000522348 TTC21AQ8NDW8 1320 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms