RNA–Protein interactions for RNA: ENST00000522328.1

SH2D4A-205, Transcript of SH2 domain containing 4A, humanhuman

TSL 2

Gene SH2D4A, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-205ENST00000522328 XRN1Q8IZH2 1706 aaKnown RBP10.37□□□□□ -0.75
SH2D4A-205ENST00000522328 PTPRUQ92729 1446 aa10.37□□□□□ -0.75
SH2D4A-205ENST00000522328 NRXN3Q9Y4C0 1643 aa10.36□□□□□ -0.75
SH2D4A-205ENST00000522328 RRBP1Q9P2E9 1410 aaKnown RBP10.36□□□□□ -0.75
SH2D4A-205ENST00000522328 RGL2O15211 777 aa10.36□□□□□ -0.75
SH2D4A-205ENST00000522328 ZNF326Q5BKZ1 582 aaKnown RBP10.36□□□□□ -0.75
SH2D4A-205ENST00000522328 ZBTB47Q9UFB7 747 aaPredicted RBP10.36□□□□□ -0.75
SH2D4A-205ENST00000522328 SHPRHQ149N8 1683 aa10.36□□□□□ -0.75
SH2D4A-205ENST00000522328 MEX3CQ5U5Q3 659 aaKnown RBP10.35□□□□□ -0.75
SH2D4A-205ENST00000522328 ZNF772Q68DY9 489 aaPredicted RBP10.35□□□□□ -0.75
SH2D4A-205ENST00000522328 BRINP3Q76B58 766 aa10.35□□□□□ -0.75
SH2D4A-205ENST00000522328 BBXQ8WY36 941 aaPredicted RBP10.35□□□□□ -0.75
SH2D4A-205ENST00000522328 LRP6O75581 1613 aa10.34□□□□□ -0.75
SH2D4A-205ENST00000522328 PLEKHG5O94827 1062 aa10.34□□□□□ -0.75
SH2D4A-205ENST00000522328 MST1RQ04912 1400 aa10.33□□□□□ -0.76
SH2D4A-205ENST00000522328 NAIPQ13075 1403 aa10.33□□□□□ -0.76
SH2D4A-205ENST00000522328 SETD5Q9C0A6 1442 aa10.33□□□□□ -0.76
SH2D4A-205ENST00000522328 ADGRL3Q9HAR2 1447 aa10.33□□□□□ -0.76
SH2D4A-205ENST00000522328 NEXMIFQ5QGS0 1516 aa10.33□□□□□ -0.76
SH2D4A-205ENST00000522328 ASXL1Q8IXJ9 1541 aa10.33□□□□□ -0.76
SH2D4A-205ENST00000522328 METP08581 1390 aa10.33□□□□□ -0.76
SH2D4A-205ENST00000522328 CLTCL1P53675 1640 aa10.33□□□□□ -0.76
SH2D4A-205ENST00000522328 VGFO15240 615 aaPredicted RBP10.31□□□□□ -0.76
SH2D4A-205ENST00000522328 LRRC59Q96AG4 307 aaKnown RBP10.31□□□□□ -0.76
SH2D4A-205ENST00000522328 NHSL1Q5SYE7 1610 aa10.31□□□□□ -0.76
SH2D4A-205ENST00000522328 HFM1A2PYH4 1435 aa10.31□□□□□ -0.76
SH2D4A-205ENST00000522328 PTCH1Q13635 1447 aa10.31□□□□□ -0.76
SH2D4A-205ENST00000522328 PRAG1Q86YV5 1406 aa10.31□□□□□ -0.76
SH2D4A-205ENST00000522328 RPGRIP1LQ68CZ1 1315 aa10.31□□□□□ -0.76
SH2D4A-205ENST00000522328 KIF1BO60333 1816 aa10.3□□□□□ -0.76
SH2D4A-205ENST00000522328 PPARGC1BQ86YN6 1023 aaKnown RBP10.3□□□□□ -0.76
SH2D4A-205ENST00000522328 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.3□□□□□ -0.76
SH2D4A-205ENST00000522328 CDK12Q9NYV4 1490 aaPredicted RBP10.3□□□□□ -0.76
SH2D4A-205ENST00000522328 CIZ1Q9ULV3 898 aaPredicted RBP10.29□□□□□ -0.76
SH2D4A-205ENST00000522328 SETD1AO15047 1707 aaKnown RBP10.28□□□□□ -0.76
SH2D4A-205ENST00000522328 NALCNQ8IZF0 1738 aa10.28□□□□□ -0.76
SH2D4A-205ENST00000522328 RXRBP28702 533 aa10.28□□□□□ -0.76
SH2D4A-205ENST00000522328 NUTM2BA6NNL0 878 aaPredicted RBP10.27□□□□□ -0.77
SH2D4A-205ENST00000522328 NUTM2EB1AL46 878 aaPredicted RBP10.27□□□□□ -0.77
SH2D4A-205ENST00000522328 NUTM2AQ8IVF1 878 aaPredicted RBP10.27□□□□□ -0.77
SH2D4A-205ENST00000522328 VSIG10Q8N0Z9 540 aa10.27□□□□□ -0.77
SH2D4A-205ENST00000522328 TRIM52Q96A61 297 aa10.27□□□□□ -0.77
SH2D4A-205ENST00000522328 C1orf167Q5SNV9 1468 aa10.27□□□□□ -0.77
SH2D4A-205ENST00000522328 LAMC1P11047 1609 aa10.26□□□□□ -0.77
SH2D4A-205ENST00000522328 AFF2P51816 1311 aa10.26□□□□□ -0.77
SH2D4A-205ENST00000522328 PNPLA6Q8IY17 1366 aa10.26□□□□□ -0.77
SH2D4A-205ENST00000522328 ROBO2Q9HCK4 1378 aa10.25□□□□□ -0.77
SH2D4A-205ENST00000522328 UPF1Q92900 1129 aaKnown RBP eCLIP10.24□□□□□ -0.77
SH2D4A-205ENST00000522328 AKT1S1Q96B36 256 aa10.24□□□□□ -0.77
SH2D4A-205ENST00000522328 RBM42Q9BTD8 480 aaKnown RBP10.24□□□□□ -0.77
SH2D4A-205ENST00000522328 SOS2Q07890 1332 aaPredicted RBP10.24□□□□□ -0.77
SH2D4A-205ENST00000522328 RBM6P78332 1123 aaKnown RBP10.23□□□□□ -0.77
SH2D4A-205ENST00000522328 PAXIP1Q6ZW49 1069 aaPredicted RBP10.23□□□□□ -0.77
SH2D4A-205ENST00000522328 SPDYE1Q8NFV5 336 aaPredicted RBP10.23□□□□□ -0.77
SH2D4A-205ENST00000522328 ACIN1Q9UKV3 1341 aaKnown RBP10.23□□□□□ -0.77
SH2D4A-205ENST00000522328 PPLO60437 1756 aa10.23□□□□□ -0.77
SH2D4A-205ENST00000522328 CCDC144AA2RUR9 1427 aa10.23□□□□□ -0.77
SH2D4A-205ENST00000522328 CDC42BPGQ6DT37 1551 aa10.22□□□□□ -0.77
SH2D4A-205ENST00000522328 C8orf37Q96NL8 207 aa10.22□□□□□ -0.77
SH2D4A-205ENST00000522328 ANKRD30BQ9BXX2 1392 aa10.22□□□□□ -0.77
SH2D4A-205ENST00000522328 NUBP1P53384 320 aa10.21□□□□□ -0.77
SH2D4A-205ENST00000522328 DDX17Q92841 729 aaKnown RBP10.21□□□□□ -0.77
SH2D4A-205ENST00000522328 NGLY1Q96IV0 654 aa10.21□□□□□ -0.77
SH2D4A-205ENST00000522328 QTRT2Q9H974 415 aaKnown RBP10.21□□□□□ -0.77
SH2D4A-205ENST00000522328 NPHP3Q7Z494 1330 aa10.21□□□□□ -0.78
SH2D4A-205ENST00000522328 TECPR2O15040 1411 aa10.21□□□□□ -0.78
SH2D4A-205ENST00000522328 ORAI2Q96SN7 254 aa10.2□□□□□ -0.78
SH2D4A-205ENST00000522328 COL22A1Q8NFW1 1626 aaPredicted RBP10.19□□□□□ -0.78
SH2D4A-205ENST00000522328 RGS12O14924 1447 aa10.19□□□□□ -0.78
SH2D4A-205ENST00000522328 SPATA31E1Q6ZUB1 1445 aa10.19□□□□□ -0.78
SH2D4A-205ENST00000522328 LRPPRCP42704 1394 aaKnown RBP10.19□□□□□ -0.78
SH2D4A-205ENST00000522328 CFAP44Q96MT7 982 aa10.19□□□□□ -0.78
SH2D4A-205ENST00000522328 ABCC11Q96J66 1382 aa10.18□□□□□ -0.78
SH2D4A-205ENST00000522328 ADGRF5Q8IZF2 1346 aa10.18□□□□□ -0.78
SH2D4A-205ENST00000522328 ADAMTS2O95450 1211 aa10.18□□□□□ -0.78
SH2D4A-205ENST00000522328 GSE1Q14687 1217 aa10.18□□□□□ -0.78
SH2D4A-205ENST00000522328 ESCO1Q5FWF5 840 aa10.18□□□□□ -0.78
SH2D4A-205ENST00000522328 FNBP4Q8N3X1 1017 aaPredicted RBP10.18□□□□□ -0.78
SH2D4A-205ENST00000522328 TRPC5Q9UL62 973 aaPredicted RBP10.18□□□□□ -0.78
SH2D4A-205ENST00000522328 KDM2AQ9Y2K7 1162 aa10.18□□□□□ -0.78
SH2D4A-205ENST00000522328 MYOM2P54296 1465 aa10.17□□□□□ -0.78
SH2D4A-205ENST00000522328 KNDC1Q76NI1 1749 aa10.17□□□□□ -0.78
SH2D4A-205ENST00000522328 MPHOSPH9Q99550 1183 aa10.17□□□□□ -0.78
SH2D4A-205ENST00000522328 USP21Q9UK80 565 aa10.17□□□□□ -0.78
SH2D4A-205ENST00000522328 PXDNQ92626 1479 aa10.17□□□□□ -0.78
SH2D4A-205ENST00000522328 PIK3C2GO75747 1445 aa10.16□□□□□ -0.78
SH2D4A-205ENST00000522328 IFT172Q9UG01 1749 aa10.16□□□□□ -0.78
SH2D4A-205ENST00000522328 ATAD2Q6PL18 1390 aa10.16□□□□□ -0.78
SH2D4A-205ENST00000522328 RGL3Q3MIN7 710 aa10.16□□□□□ -0.78
SH2D4A-205ENST00000522328 SPRYD3Q8NCJ5 442 aa10.16□□□□□ -0.78
SH2D4A-205ENST00000522328 RNF25Q96BH1 459 aaPredicted RBP10.16□□□□□ -0.78
SH2D4A-205ENST00000522328 SIRT1Q96EB6 747 aa10.16□□□□□ -0.78
SH2D4A-205ENST00000522328 CREBZFQ9NS37 354 aa10.16□□□□□ -0.78
SH2D4A-205ENST00000522328 MNX1P50219 401 aaPredicted RBP10.15□□□□□ -0.78
SH2D4A-205ENST00000522328 REM2Q8IYK8 340 aaPredicted RBP10.15□□□□□ -0.78
SH2D4A-205ENST00000522328 ATRNO75882 1429 aa10.15□□□□□ -0.79
SH2D4A-205ENST00000522328 FOXO3O43524 673 aa10.14□□□□□ -0.79
SH2D4A-205ENST00000522328 HS6ST3Q8IZP7 471 aa10.14□□□□□ -0.79
SH2D4A-205ENST00000522328 STK26Q9P289 416 aa10.14□□□□□ -0.79
SH2D4A-205ENST00000522328 EP400Q96L91 3159 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms