RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 CCDC9Q9Y3X0 531 aaKnown RBP17.31■□□□□ 0.36
CTNNA1-234ENST00000522227 COL22A1Q8NFW1 1626 aaPredicted RBP17.3■□□□□ 0.36
CTNNA1-234ENST00000522227 A0A0G2JS52 829 aa17.3■□□□□ 0.36
CTNNA1-234ENST00000522227 MYT1Q01538 1121 aa17.3■□□□□ 0.36
CTNNA1-234ENST00000522227 VPS8Q8N3P4 1428 aa17.3■□□□□ 0.36
CTNNA1-234ENST00000522227 ANKRD50Q9ULJ7 1429 aa17.3■□□□□ 0.36
CTNNA1-234ENST00000522227 LAMC1P11047 1609 aa17.29■□□□□ 0.36
CTNNA1-234ENST00000522227 MARF1Q9Y4F3 1742 aaKnown RBP17.29■□□□□ 0.36
CTNNA1-234ENST00000522227 EN1Q05925 392 aaPredicted RBP17.28■□□□□ 0.36
CTNNA1-234ENST00000522227 ESCO1Q5FWF5 840 aa17.28■□□□□ 0.36
CTNNA1-234ENST00000522227 KRT27Q7Z3Y8 459 aa17.28■□□□□ 0.36
CTNNA1-234ENST00000522227 E9PCH4 1651 aa17.28■□□□□ 0.36
CTNNA1-234ENST00000522227 FOXO3O43524 673 aa17.26■□□□□ 0.35
CTNNA1-234ENST00000522227 NPHP3Q7Z494 1330 aa17.25■□□□□ 0.35
CTNNA1-234ENST00000522227 NUTM2FA1L443 756 aa17.24■□□□□ 0.35
CTNNA1-234ENST00000522227 FAM50AQ14320 339 aaKnown RBP17.24■□□□□ 0.35
CTNNA1-234ENST00000522227 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.24■□□□□ 0.35
CTNNA1-234ENST00000522227 SLIT2O94813 1529 aa17.23■□□□□ 0.35
CTNNA1-234ENST00000522227 HAP1P54257 671 aaPredicted RBP17.23■□□□□ 0.35
CTNNA1-234ENST00000522227 FAM182BQ5T319 152 aa17.23■□□□□ 0.35
CTNNA1-234ENST00000522227 ROBO2Q9HCK4 1378 aa17.22■□□□□ 0.35
CTNNA1-234ENST00000522227 ADGRL2O95490 1459 aa17.22■□□□□ 0.35
CTNNA1-234ENST00000522227 SPHKAPQ2M3C7 1700 aa17.21■□□□□ 0.35
CTNNA1-234ENST00000522227 PXDNQ92626 1479 aa17.21■□□□□ 0.35
CTNNA1-234ENST00000522227 VPS72Q15906 364 aa17.19■□□□□ 0.34
CTNNA1-234ENST00000522227 EZH2Q15910 746 aaKnown RBP17.18■□□□□ 0.34
CTNNA1-234ENST00000522227 CABLES1Q8TDN4 633 aa17.18■□□□□ 0.34
CTNNA1-234ENST00000522227 APLP2Q06481 763 aa17.17■□□□□ 0.34
CTNNA1-234ENST00000522227 FAM98CQ17RN3 349 aaKnown RBP17.17■□□□□ 0.34
CTNNA1-234ENST00000522227 IQGAP3Q86VI3 1631 aa17.16■□□□□ 0.34
CTNNA1-234ENST00000522227 SENP3-EIF4A1A0A087X0R7 540 aa17.15■□□□□ 0.34
CTNNA1-234ENST00000522227 IFFO2Q5TF58 517 aa17.15■□□□□ 0.34
CTNNA1-234ENST00000522227 NUP155O75694 1391 aa17.15■□□□□ 0.34
CTNNA1-234ENST00000522227 DCAF8L1A6NGE4 600 aa17.14■□□□□ 0.33
CTNNA1-234ENST00000522227 ONECUT3O60422 494 aaPredicted RBP17.14■□□□□ 0.33
CTNNA1-234ENST00000522227 PPP1R1BQ9UD71 204 aaPredicted RBP17.14■□□□□ 0.33
CTNNA1-234ENST00000522227 USP32Q8NFA0 1604 aa17.14■□□□□ 0.33
CTNNA1-234ENST00000522227 SPATA31A3Q5VYP0 1347 aa17.13■□□□□ 0.33
CTNNA1-234ENST00000522227 LMOD2Q6P5Q4 547 aa17.12■□□□□ 0.33
CTNNA1-234ENST00000522227 LRPPRCP42704 1394 aaKnown RBP17.12■□□□□ 0.33
CTNNA1-234ENST00000522227 KRT28Q7Z3Y7 464 aa17.11■□□□□ 0.33
CTNNA1-234ENST00000522227 NEXMIFQ5QGS0 1516 aa17.11■□□□□ 0.33
CTNNA1-234ENST00000522227 PLCH1Q4KWH8 1693 aa17.1■□□□□ 0.33
CTNNA1-234ENST00000522227 LOC105371045A0A1W2PR82 267 aa17.09■□□□□ 0.33
CTNNA1-234ENST00000522227 HFM1A2PYH4 1435 aa17.09■□□□□ 0.33
CTNNA1-234ENST00000522227 RGPD1P0DJD0 1748 aa17.09■□□□□ 0.33
CTNNA1-234ENST00000522227 FAM83GA6ND36 823 aa17.07■□□□□ 0.32
CTNNA1-234ENST00000522227 TRIM37O94972 964 aa17.07■□□□□ 0.32
CTNNA1-234ENST00000522227 NAIPQ13075 1403 aa17.06■□□□□ 0.32
CTNNA1-234ENST00000522227 CAMKK2Q96RR4 588 aa17.06■□□□□ 0.32
CTNNA1-234ENST00000522227 STK26Q9P289 416 aa17.06■□□□□ 0.32
CTNNA1-234ENST00000522227 CDC42BPGQ6DT37 1551 aa17.06■□□□□ 0.32
CTNNA1-234ENST00000522227 APBA3O96018 575 aa17.05■□□□□ 0.32
CTNNA1-234ENST00000522227 WAPLQ7Z5K2 1190 aa17.05■□□□□ 0.32
CTNNA1-234ENST00000522227 ZNF784Q8NCA9 323 aaPredicted RBP17.04■□□□□ 0.32
CTNNA1-234ENST00000522227 BTG4Q9NY30 223 aa17.04■□□□□ 0.32
CTNNA1-234ENST00000522227 CLTCL1P53675 1640 aa17.03■□□□□ 0.32
CTNNA1-234ENST00000522227 VGFO15240 615 aaPredicted RBP17.03■□□□□ 0.32
CTNNA1-234ENST00000522227 TNS1Q9HBL0 1735 aaKnown RBP17.03■□□□□ 0.32
CTNNA1-234ENST00000522227 NWD2Q9ULI1 1742 aa17.03■□□□□ 0.32
CTNNA1-234ENST00000522227 CCDC144AA2RUR9 1427 aa17.03■□□□□ 0.32
CTNNA1-234ENST00000522227 CAMTA1Q9Y6Y1 1673 aa17.02■□□□□ 0.32
CTNNA1-234ENST00000522227 SPON1Q9HCB6 807 aa17.02■□□□□ 0.32
CTNNA1-234ENST00000522227 DISP2A7MBM2 1401 aa17.02■□□□□ 0.31
CTNNA1-234ENST00000522227 ITGAEP38570 1179 aa17.01■□□□□ 0.31
CTNNA1-234ENST00000522227 TNS3Q68CZ2 1445 aa17.01■□□□□ 0.31
CTNNA1-234ENST00000522227 KCNQ2O43526 872 aa16.99■□□□□ 0.31
CTNNA1-234ENST00000522227 PSME1Q06323 249 aa16.99■□□□□ 0.31
CTNNA1-234ENST00000522227 NBPF8Q3BBV2 869 aa16.99■□□□□ 0.31
CTNNA1-234ENST00000522227 NBPF14Q5TI25 921 aa16.99■□□□□ 0.31
CTNNA1-234ENST00000522227 C1QTNF8P60827 252 aa16.97■□□□□ 0.31
CTNNA1-234ENST00000522227 PHF8Q9UPP1 1060 aa16.97■□□□□ 0.31
CTNNA1-234ENST00000522227 PLEKHH1Q9ULM0 1364 aa16.97■□□□□ 0.31
CTNNA1-234ENST00000522227 NINLQ9Y2I6 1382 aa16.97■□□□□ 0.31
CTNNA1-234ENST00000522227 ADGRB2O60241 1585 aa16.97■□□□□ 0.31
CTNNA1-234ENST00000522227 PRAG1Q86YV5 1406 aa16.96■□□□□ 0.31
CTNNA1-234ENST00000522227 KIF1BO60333 1816 aa16.96■□□□□ 0.31
CTNNA1-234ENST00000522227 NRAPQ86VF7 1730 aa16.96■□□□□ 0.3
CTNNA1-234ENST00000522227 ABCA3Q99758 1704 aa16.96■□□□□ 0.3
CTNNA1-234ENST00000522227 SPATA31A5Q5VU36 1347 aa16.96■□□□□ 0.3
CTNNA1-234ENST00000522227 SPATA31A7Q8IWB4 1347 aa16.96■□□□□ 0.3
CTNNA1-234ENST00000522227 KIF1AQ12756 1690 aa16.95■□□□□ 0.3
CTNNA1-234ENST00000522227 FAM196AQ6ZSG2 479 aa16.94■□□□□ 0.3
CTNNA1-234ENST00000522227 FMN2Q9NZ56 1722 aa16.93■□□□□ 0.3
CTNNA1-234ENST00000522227 ARHGEF10O15013 1369 aa16.92■□□□□ 0.3
CTNNA1-234ENST00000522227 ROCK1Q13464 1354 aa16.92■□□□□ 0.3
CTNNA1-234ENST00000522227 TMEM132EQ6IEE7 984 aa16.92■□□□□ 0.3
CTNNA1-234ENST00000522227 NUP188Q5SRE5 1749 aa16.92■□□□□ 0.3
CTNNA1-234ENST00000522227 PARD3Q8TEW0 1356 aa16.91■□□□□ 0.3
CTNNA1-234ENST00000522227 PMFBP1Q8TBY8 1022 aa16.91■□□□□ 0.3
CTNNA1-234ENST00000522227 RGPD8O14715 1765 aaPredicted RBP16.91■□□□□ 0.3
CTNNA1-234ENST00000522227 THSD7AQ9UPZ6 1657 aa16.91■□□□□ 0.3
CTNNA1-234ENST00000522227 SBNO1A3KN83 1393 aa16.9■□□□□ 0.3
CTNNA1-234ENST00000522227 USP35Q9P2H5 1018 aa16.9■□□□□ 0.3
CTNNA1-234ENST00000522227 RREB1Q92766 1687 aa16.89■□□□□ 0.29
CTNNA1-234ENST00000522227 STRN4Q9NRL3 753 aa16.89■□□□□ 0.29
CTNNA1-234ENST00000522227 ADGRF5Q8IZF2 1346 aa16.88■□□□□ 0.29
CTNNA1-234ENST00000522227 COL14A1Q05707 1796 aaKnown RBP16.87■□□□□ 0.29
CTNNA1-234ENST00000522227 SAFB2Q14151 953 aaKnown RBP eCLIP16.87■□□□□ 0.29
CTNNA1-234ENST00000522227 RPGRIP1LQ68CZ1 1315 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms