RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 PROM2Q8N271 834 aa14.24□□□□□ -0.13
TRAPPC9-212ENST00000521944 MYOM3Q5VTT5 1437 aa14.24□□□□□ -0.13
TRAPPC9-212ENST00000521944 KANK1Q14678 1352 aa14.23□□□□□ -0.13
TRAPPC9-212ENST00000521944 DEFB132Q7Z7B7 95 aa14.23□□□□□ -0.13
TRAPPC9-212ENST00000521944 TMEM131LA2VDJ0 1609 aa14.23□□□□□ -0.13
TRAPPC9-212ENST00000521944 LRP5O75197 1615 aa14.23□□□□□ -0.13
TRAPPC9-212ENST00000521944 PITPNM1O00562 1244 aa14.22□□□□□ -0.13
TRAPPC9-212ENST00000521944 HDGFP51858 240 aaKnown RBP14.21□□□□□ -0.13
TRAPPC9-212ENST00000521944 KANK4Q5T7N3 995 aaPredicted RBP14.21□□□□□ -0.13
TRAPPC9-212ENST00000521944 CHRDL2Q6WN34 429 aa14.21□□□□□ -0.13
TRAPPC9-212ENST00000521944 BCL9LQ86UU0 1499 aa14.2□□□□□ -0.14
TRAPPC9-212ENST00000521944 CLEC11AQ9Y240 323 aa14.19□□□□□ -0.14
TRAPPC9-212ENST00000521944 TRPM2O94759 1503 aa14.19□□□□□ -0.14
TRAPPC9-212ENST00000521944 GCC2Q8IWJ2 1684 aa14.18□□□□□ -0.14
TRAPPC9-212ENST00000521944 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.18□□□□□ -0.14
TRAPPC9-212ENST00000521944 SOS2Q07890 1332 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC9-212ENST00000521944 BLMP54132 1417 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC9-212ENST00000521944 HRCP23327 699 aa14.16□□□□□ -0.14
TRAPPC9-212ENST00000521944 GJD4Q96KN9 370 aaPredicted RBP14.16□□□□□ -0.14
TRAPPC9-212ENST00000521944 PTCH1Q13635 1447 aa14.15□□□□□ -0.14
TRAPPC9-212ENST00000521944 RPRD2Q5VT52 1461 aaKnown RBP14.15□□□□□ -0.14
TRAPPC9-212ENST00000521944 XRN1Q8IZH2 1706 aaKnown RBP14.15□□□□□ -0.14
TRAPPC9-212ENST00000521944 LAMC1P11047 1609 aa14.15□□□□□ -0.14
TRAPPC9-212ENST00000521944 CROCC2H7BZ55 1655 aa14.14□□□□□ -0.15
TRAPPC9-212ENST00000521944 PSDA5PKW4 1024 aaPredicted RBP14.14□□□□□ -0.15
TRAPPC9-212ENST00000521944 ORAI2Q96SN7 254 aa14.14□□□□□ -0.15
TRAPPC9-212ENST00000521944 CHIC2Q9UKJ5 165 aa14.14□□□□□ -0.15
TRAPPC9-212ENST00000521944 C1orf167Q5SNV9 1468 aa14.13□□□□□ -0.15
TRAPPC9-212ENST00000521944 METP08581 1390 aa14.13□□□□□ -0.15
TRAPPC9-212ENST00000521944 CHGAP10645 457 aaKnown RBP14.13□□□□□ -0.15
TRAPPC9-212ENST00000521944 DAPK1P53355 1430 aa14.13□□□□□ -0.15
TRAPPC9-212ENST00000521944 ADGRL3Q9HAR2 1447 aa14.12□□□□□ -0.15
TRAPPC9-212ENST00000521944 UNC13BO14795 1591 aa14.12□□□□□ -0.15
TRAPPC9-212ENST00000521944 MYOM2P54296 1465 aa14.12□□□□□ -0.15
TRAPPC9-212ENST00000521944 NRXN3Q9Y4C0 1643 aa14.12□□□□□ -0.15
TRAPPC9-212ENST00000521944 GLI3P10071 1580 aa14.09□□□□□ -0.15
TRAPPC9-212ENST00000521944 COL22A1Q8NFW1 1626 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC9-212ENST00000521944 ANKRD30AQ9BXX3 1397 aa14.09□□□□□ -0.15
TRAPPC9-212ENST00000521944 BRWD3Q6RI45 1802 aa14.08□□□□□ -0.15
TRAPPC9-212ENST00000521944 RALGAPBQ86X10 1494 aa14.08□□□□□ -0.16
TRAPPC9-212ENST00000521944 NALCNQ8IZF0 1738 aa14.08□□□□□ -0.16
TRAPPC9-212ENST00000521944 PRR29P0C7W0 189 aa14.08□□□□□ -0.16
TRAPPC9-212ENST00000521944 PTPN23Q9H3S7 1636 aa14.05□□□□□ -0.16
TRAPPC9-212ENST00000521944 YY1P25490 414 aa14.05□□□□□ -0.16
TRAPPC9-212ENST00000521944 UNC5CLQ8IV45 518 aa14.05□□□□□ -0.16
TRAPPC9-212ENST00000521944 SEPT12Q8IYM1 358 aa14.05□□□□□ -0.16
TRAPPC9-212ENST00000521944 ONECUT3O60422 494 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC9-212ENST00000521944 FBXO3Q9UK99 471 aa14.04□□□□□ -0.16
TRAPPC9-212ENST00000521944 SLIT2O94813 1529 aa14.04□□□□□ -0.16
TRAPPC9-212ENST00000521944 SF3B2Q13435 895 aaKnown RBP14.03□□□□□ -0.16
TRAPPC9-212ENST00000521944 MARF1Q9Y4F3 1742 aaKnown RBP14.02□□□□□ -0.16
TRAPPC9-212ENST00000521944 PXDNQ92626 1479 aa14.01□□□□□ -0.17
TRAPPC9-212ENST00000521944 ANKRD50Q9ULJ7 1429 aa14.01□□□□□ -0.17
TRAPPC9-212ENST00000521944 R3HDM1Q15032 1099 aaKnown RBP14.01□□□□□ -0.17
TRAPPC9-212ENST00000521944 SPHKAPQ2M3C7 1700 aa14.01□□□□□ -0.17
TRAPPC9-212ENST00000521944 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.01□□□□□ -0.17
TRAPPC9-212ENST00000521944 E9PCH4 1651 aa14.01□□□□□ -0.17
TRAPPC9-212ENST00000521944 ADGRL2O95490 1459 aa14□□□□□ -0.17
TRAPPC9-212ENST00000521944 ROBO2Q9HCK4 1378 aa14□□□□□ -0.17
TRAPPC9-212ENST00000521944 XPCQ01831 940 aaPredicted RBP14□□□□□ -0.17
TRAPPC9-212ENST00000521944 VPS8Q8N3P4 1428 aa13.99□□□□□ -0.17
TRAPPC9-212ENST00000521944 FXR2P51116 673 aaKnown RBP eCLIP13.99□□□□□ -0.17
TRAPPC9-212ENST00000521944 EN1Q05925 392 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC9-212ENST00000521944 KRT27Q7Z3Y8 459 aa13.99□□□□□ -0.17
TRAPPC9-212ENST00000521944 UTRNP46939 3433 aa13.99□□□□□ -0.17
TRAPPC9-212ENST00000521944 FOXO3O43524 673 aa13.97□□□□□ -0.17
TRAPPC9-212ENST00000521944 BAG6P46379 1132 aa13.97□□□□□ -0.17
TRAPPC9-212ENST00000521944 NPHP3Q7Z494 1330 aa13.96□□□□□ -0.17
TRAPPC9-212ENST00000521944 VPS72Q15906 364 aa13.96□□□□□ -0.17
TRAPPC9-212ENST00000521944 PIP4P2Q8N4L2 257 aa13.96□□□□□ -0.17
TRAPPC9-212ENST00000521944 IFFO2Q5TF58 517 aa13.95□□□□□ -0.18
TRAPPC9-212ENST00000521944 ESCO1Q5FWF5 840 aa13.94□□□□□ -0.18
TRAPPC9-212ENST00000521944 IQGAP3Q86VI3 1631 aa13.93□□□□□ -0.18
TRAPPC9-212ENST00000521944 FAM182BQ5T319 152 aa13.92□□□□□ -0.18
TRAPPC9-212ENST00000521944 EZH2Q15910 746 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-212ENST00000521944 SPATA31A3Q5VYP0 1347 aa13.9□□□□□ -0.18
TRAPPC9-212ENST00000521944 ZNF326Q5BKZ1 582 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-212ENST00000521944 POTEHQ6S545 545 aa13.9□□□□□ -0.18
TRAPPC9-212ENST00000521944 NEXMIFQ5QGS0 1516 aa13.9□□□□□ -0.19
TRAPPC9-212ENST00000521944 DISP2A7MBM2 1401 aa13.9□□□□□ -0.19
TRAPPC9-212ENST00000521944 PRAG1Q86YV5 1406 aa13.9□□□□□ -0.19
TRAPPC9-212ENST00000521944 CABLES1Q8TDN4 633 aa13.89□□□□□ -0.19
TRAPPC9-212ENST00000521944 CAMKK2Q96RR4 588 aa13.89□□□□□ -0.19
TRAPPC9-212ENST00000521944 CEP350Q5VT06 3117 aa13.88□□□□□ -0.19
TRAPPC9-212ENST00000521944 PLEKHG5O94827 1062 aa13.88□□□□□ -0.19
TRAPPC9-212ENST00000521944 PRKAR2AP13861 404 aaKnown RBP13.88□□□□□ -0.19
TRAPPC9-212ENST00000521944 USP32Q8NFA0 1604 aa13.88□□□□□ -0.19
TRAPPC9-212ENST00000521944 FAM83GA6ND36 823 aa13.87□□□□□ -0.19
TRAPPC9-212ENST00000521944 FAM98CQ17RN3 349 aaKnown RBP13.87□□□□□ -0.19
TRAPPC9-212ENST00000521944 CCDC9Q9Y3X0 531 aaKnown RBP13.86□□□□□ -0.19
TRAPPC9-212ENST00000521944 HFM1A2PYH4 1435 aa13.86□□□□□ -0.19
TRAPPC9-212ENST00000521944 NUP155O75694 1391 aa13.85□□□□□ -0.19
TRAPPC9-212ENST00000521944 NUTM2FA1L443 756 aa13.85□□□□□ -0.19
TRAPPC9-212ENST00000521944 ZNF784Q8NCA9 323 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC9-212ENST00000521944 TNS1Q9HBL0 1735 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-212ENST00000521944 LRPPRCP42704 1394 aaKnown RBP13.83□□□□□ -0.19
TRAPPC9-212ENST00000521944 CDC42BPGQ6DT37 1551 aa13.83□□□□□ -0.19
TRAPPC9-212ENST00000521944 PLCH1Q4KWH8 1693 aa13.83□□□□□ -0.2
TRAPPC9-212ENST00000521944 RGPD1P0DJD0 1748 aa13.83□□□□□ -0.2
TRAPPC9-212ENST00000521944 NWD2Q9ULI1 1742 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms