RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 DLC1Q96QB1 1528 aa24.77■■□□□ 1.56
TRAPPC9-210ENST00000521667 CABP2Q9NPB3 220 aa24.77■■□□□ 1.56
TRAPPC9-210ENST00000521667 NLRP1Q9C000 1473 aa24.76■■□□□ 1.55
TRAPPC9-210ENST00000521667 BLMP54132 1417 aaPredicted RBP24.76■■□□□ 1.55
TRAPPC9-210ENST00000521667 NRXN3Q9Y4C0 1643 aa24.76■■□□□ 1.55
TRAPPC9-210ENST00000521667 TMEM2Q9UHN6 1383 aa24.75■■□□□ 1.55
TRAPPC9-210ENST00000521667 MINK1Q8N4C8 1332 aaPredicted RBP24.74■■□□□ 1.55
TRAPPC9-210ENST00000521667 ANKRD36BQ8N2N9 1353 aa24.74■■□□□ 1.55
TRAPPC9-210ENST00000521667 NINLQ9Y2I6 1382 aa24.74■■□□□ 1.55
TRAPPC9-210ENST00000521667 SRPK2P78362 688 aaKnown RBP24.73■■□□□ 1.55
TRAPPC9-210ENST00000521667 USP32Q8NFA0 1604 aa24.73■■□□□ 1.55
TRAPPC9-210ENST00000521667 SENP3-EIF4A1A0A087X0R7 540 aa24.73■■□□□ 1.55
TRAPPC9-210ENST00000521667 ABCC11Q96J66 1382 aa24.73■■□□□ 1.55
TRAPPC9-210ENST00000521667 NUDCQ9Y266 331 aa24.73■■□□□ 1.55
TRAPPC9-210ENST00000521667 ATAD2Q6PL18 1390 aa24.72■■□□□ 1.55
TRAPPC9-210ENST00000521667 CGNL1Q0VF96 1302 aa24.69■■□□□ 1.54
TRAPPC9-210ENST00000521667 WDR43Q15061 677 aaKnown RBP eCLIP24.69■■□□□ 1.54
TRAPPC9-210ENST00000521667 METP08581 1390 aa24.68■■□□□ 1.54
TRAPPC9-210ENST00000521667 BCANQ96GW7 911 aa24.68■■□□□ 1.54
TRAPPC9-210ENST00000521667 ADAMTS8Q9UP79 889 aa24.68■■□□□ 1.54
TRAPPC9-210ENST00000521667 MORC1Q86VD1 984 aa24.66■■□□□ 1.54
TRAPPC9-210ENST00000521667 LTKP29376 864 aa24.66■■□□□ 1.54
TRAPPC9-210ENST00000521667 WAPLQ7Z5K2 1190 aa24.65■■□□□ 1.54
TRAPPC9-210ENST00000521667 PELP1Q8IZL8 1130 aaKnown RBP24.65■■□□□ 1.54
TRAPPC9-210ENST00000521667 CDK19Q9BWU1 502 aa24.65■■□□□ 1.54
TRAPPC9-210ENST00000521667 NSD2O96028 1365 aa24.65■■□□□ 1.54
TRAPPC9-210ENST00000521667 PLEKHH1Q9ULM0 1364 aa24.64■■□□□ 1.54
TRAPPC9-210ENST00000521667 A0A1W2PP64 1363 aa24.64■■□□□ 1.53
TRAPPC9-210ENST00000521667 PDE3BQ13370 1112 aa24.64■■□□□ 1.53
TRAPPC9-210ENST00000521667 TECPR2O15040 1411 aa24.62■■□□□ 1.53
TRAPPC9-210ENST00000521667 PLEKHG1Q9ULL1 1385 aa24.62■■□□□ 1.53
TRAPPC9-210ENST00000521667 SIRT1Q96EB6 747 aa24.62■■□□□ 1.53
TRAPPC9-210ENST00000521667 SALL2Q9Y467 1007 aaPredicted RBP24.62■■□□□ 1.53
TRAPPC9-210ENST00000521667 CEP170BQ9Y4F5 1589 aaPredicted RBP24.61■■□□□ 1.53
TRAPPC9-210ENST00000521667 TERF2IPQ9NYB0 399 aa24.61■■□□□ 1.53
TRAPPC9-210ENST00000521667 KNDC1Q76NI1 1749 aa24.61■■□□□ 1.53
TRAPPC9-210ENST00000521667 POLR3AO14802 1390 aaPredicted RBP24.61■■□□□ 1.53
TRAPPC9-210ENST00000521667 TXNDC2Q86VQ3 553 aa24.61■■□□□ 1.53
TRAPPC9-210ENST00000521667 FAM135BQ49AJ0 1406 aa24.6■■□□□ 1.53
TRAPPC9-210ENST00000521667 ADAMTS13Q76LX8 1427 aa24.6■■□□□ 1.53
TRAPPC9-210ENST00000521667 SLIT1O75093 1534 aa24.59■■□□□ 1.53
TRAPPC9-210ENST00000521667 IRX6P78412 446 aaPredicted RBP24.59■■□□□ 1.53
TRAPPC9-210ENST00000521667 CD163L1Q9NR16 1453 aa24.59■■□□□ 1.53
TRAPPC9-210ENST00000521667 ERICH6BQ5W0A0 696 aa24.59■■□□□ 1.53
TRAPPC9-210ENST00000521667 ARHGAP23Q9P227 1491 aa24.58■■□□□ 1.53
TRAPPC9-210ENST00000521667 THEMISQ8N1K5 641 aaPredicted RBP24.58■■□□□ 1.53
TRAPPC9-210ENST00000521667 CPS1P31327 1500 aa24.58■■□□□ 1.53
TRAPPC9-210ENST00000521667 EID1Q9Y6B2 187 aa24.57■■□□□ 1.52
TRAPPC9-210ENST00000521667 TNNT2P45379 298 aaPredicted RBP24.56■■□□□ 1.52
TRAPPC9-210ENST00000521667 HDGFL2Q7Z4V5 671 aaPredicted RBP24.56■■□□□ 1.52
TRAPPC9-210ENST00000521667 CABP1Q9NZU7 370 aa24.54■■□□□ 1.52
TRAPPC9-210ENST00000521667 RNF123Q5XPI4 1314 aa24.53■■□□□ 1.52
TRAPPC9-210ENST00000521667 WASLO00401 505 aaPredicted RBP24.53■■□□□ 1.52
TRAPPC9-210ENST00000521667 ZNF142P52746 1687 aaPredicted RBP24.52■■□□□ 1.52
TRAPPC9-210ENST00000521667 MED14O60244 1454 aa24.52■■□□□ 1.52
TRAPPC9-210ENST00000521667 ATP7BP35670 1465 aa24.51■■□□□ 1.51
TRAPPC9-210ENST00000521667 SLC26A8Q96RN1 970 aa24.51■■□□□ 1.51
TRAPPC9-210ENST00000521667 MTHFSP49914 203 aa24.49■■□□□ 1.51
TRAPPC9-210ENST00000521667 CDCA7LQ96GN5 454 aa24.49■■□□□ 1.51
TRAPPC9-210ENST00000521667 ROBO2Q9HCK4 1378 aa24.49■■□□□ 1.51
TRAPPC9-210ENST00000521667 SETD1BQ9UPS6 1966 aaKnown RBP24.49■■□□□ 1.51
TRAPPC9-210ENST00000521667 FYB1O15117 783 aa24.47■■□□□ 1.51
TRAPPC9-210ENST00000521667 CFAP53Q96M91 514 aa24.47■■□□□ 1.51
TRAPPC9-210ENST00000521667 GGNBP2Q9H3C7 697 aa24.47■■□□□ 1.51
TRAPPC9-210ENST00000521667 CCDC146Q8IYE0 955 aa24.47■■□□□ 1.51
TRAPPC9-210ENST00000521667 SHPRHQ149N8 1683 aa24.46■■□□□ 1.51
TRAPPC9-210ENST00000521667 TBX22Q9Y458 520 aa24.45■■□□□ 1.5
TRAPPC9-210ENST00000521667 ZNF521Q96K83 1311 aa24.45■■□□□ 1.5
TRAPPC9-210ENST00000521667 PPIP5K1Q6PFW1 1433 aa24.44■■□□□ 1.5
TRAPPC9-210ENST00000521667 ANKRD26Q9UPS8 1709 aa24.44■■□□□ 1.5
TRAPPC9-210ENST00000521667 PPP4R2Q9NY27 417 aa24.44■■□□□ 1.5
TRAPPC9-210ENST00000521667 PTPRUQ92729 1446 aa24.43■■□□□ 1.5
TRAPPC9-210ENST00000521667 NUDT16Q96DE0 195 aaKnown RBP24.43■■□□□ 1.5
TRAPPC9-210ENST00000521667 RCAN3Q9UKA8 241 aa24.42■■□□□ 1.5
TRAPPC9-210ENST00000521667 APAF1O14727 1248 aa24.42■■□□□ 1.5
TRAPPC9-210ENST00000521667 CPSF1Q10570 1443 aaKnown RBP24.42■■□□□ 1.5
TRAPPC9-210ENST00000521667 ADGRB2O60241 1585 aa24.41■■□□□ 1.5
TRAPPC9-210ENST00000521667 DIP2AQ14689 1571 aa24.41■■□□□ 1.5
TRAPPC9-210ENST00000521667 NGEFQ8N5V2 710 aa24.41■■□□□ 1.5
TRAPPC9-210ENST00000521667 CCDC61Q9Y6R9 512 aa24.4■■□□□ 1.5
TRAPPC9-210ENST00000521667 KIF20BQ96Q89 1820 aa24.39■■□□□ 1.49
TRAPPC9-210ENST00000521667 GOLGA2Q08379 1002 aa24.39■■□□□ 1.49
TRAPPC9-210ENST00000521667 ANKLE2Q86XL3 938 aa24.39■■□□□ 1.49
TRAPPC9-210ENST00000521667 EDC4Q6P2E9 1401 aaKnown RBP24.38■■□□□ 1.49
TRAPPC9-210ENST00000521667 AMOTL2Q9Y2J4 779 aa24.38■■□□□ 1.49
TRAPPC9-210ENST00000521667 CDC42BPGQ6DT37 1551 aa24.38■■□□□ 1.49
TRAPPC9-210ENST00000521667 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.38■■□□□ 1.49
TRAPPC9-210ENST00000521667 KDM4FA0A1W2PPD8 638 aa24.37■■□□□ 1.49
TRAPPC9-210ENST00000521667 PTCH1Q13635 1447 aa24.37■■□□□ 1.49
TRAPPC9-210ENST00000521667 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.36■■□□□ 1.49
TRAPPC9-210ENST00000521667 PRR36Q9H6K5 1346 aa24.36■■□□□ 1.49
TRAPPC9-210ENST00000521667 RRP1P56182 461 aaKnown RBP24.35■■□□□ 1.49
TRAPPC9-210ENST00000521667 RUNDC1Q96C34 613 aa24.35■■□□□ 1.49
TRAPPC9-210ENST00000521667 NCKAP5LQ9HCH0 1330 aa24.34■■□□□ 1.49
TRAPPC9-210ENST00000521667 DUSP27Q5VZP5 1158 aa24.34■■□□□ 1.49
TRAPPC9-210ENST00000521667 COL3A1P02461 1466 aaPredicted RBP24.32■■□□□ 1.48
TRAPPC9-210ENST00000521667 SLFN5Q08AF3 891 aa24.32■■□□□ 1.48
TRAPPC9-210ENST00000521667 ZNF692Q9BU19 519 aaPredicted RBP24.31■■□□□ 1.48
TRAPPC9-210ENST00000521667 IQSEC2Q5JU85 1478 aa24.31■■□□□ 1.48
TRAPPC9-210ENST00000521667 MON2Q7Z3U7 1717 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms