RNA–Protein interactions for RNA: ENST00000521403.1

CERNA3-201, Transcript of competing endogenous lncRNA 3 for miR-645, humanhuman

TSL 3 BASIC

Gene CERNA3, Length 557 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERNA3-201ENST00000521403 CDC42BPGQ6DT37 1551 aa29.22■■■□□ 2.27
CERNA3-201ENST00000521403 AFF2P51816 1311 aa29.21■■■□□ 2.27
CERNA3-201ENST00000521403 TECPR2O15040 1411 aa29.21■■■□□ 2.27
CERNA3-201ENST00000521403 SOS2Q07890 1332 aaPredicted RBP29.2■■■□□ 2.27
CERNA3-201ENST00000521403 LAMC1P11047 1609 aa29.2■■■□□ 2.27
CERNA3-201ENST00000521403 ESCO1Q5FWF5 840 aa29.2■■■□□ 2.26
CERNA3-201ENST00000521403 C8orf37Q96NL8 207 aa29.2■■■□□ 2.26
CERNA3-201ENST00000521403 ABCC11Q96J66 1382 aa29.19■■■□□ 2.26
CERNA3-201ENST00000521403 RXRBP28702 533 aa29.18■■■□□ 2.26
CERNA3-201ENST00000521403 PLEKHH1Q9ULM0 1364 aa29.17■■■□□ 2.26
CERNA3-201ENST00000521403 KNDC1Q76NI1 1749 aa29.17■■■□□ 2.26
CERNA3-201ENST00000521403 NUTM2FA1L443 756 aa29.16■■■□□ 2.26
CERNA3-201ENST00000521403 ADAMTS2O95450 1211 aa29.16■■■□□ 2.26
CERNA3-201ENST00000521403 YTHDC2Q9H6S0 1430 aaKnown RBP29.16■■■□□ 2.26
CERNA3-201ENST00000521403 NPHP3Q7Z494 1330 aa29.14■■■□□ 2.25
CERNA3-201ENST00000521403 C14orf93Q9H972 538 aaKnown RBP29.13■■■□□ 2.25
CERNA3-201ENST00000521403 MYOM2P54296 1465 aa29.12■■■□□ 2.25
CERNA3-201ENST00000521403 CFAP70Q5T0N1 1121 aa29.11■■■□□ 2.25
CERNA3-201ENST00000521403 NGLY1Q96IV0 654 aa29.11■■■□□ 2.25
CERNA3-201ENST00000521403 NRXN1Q9ULB1 1477 aa29.1■■■□□ 2.25
CERNA3-201ENST00000521403 FOXO3O43524 673 aa29.1■■■□□ 2.25
CERNA3-201ENST00000521403 XPCQ01831 940 aaPredicted RBP29.1■■■□□ 2.25
CERNA3-201ENST00000521403 DHX57Q6P158 1386 aaKnown RBP29.08■■■□□ 2.25
CERNA3-201ENST00000521403 QTRT2Q9H974 415 aaKnown RBP29.07■■■□□ 2.24
CERNA3-201ENST00000521403 PXDNQ92626 1479 aa29.06■■■□□ 2.24
CERNA3-201ENST00000521403 SIRT1Q96EB6 747 aa29.05■■■□□ 2.24
CERNA3-201ENST00000521403 CDK12Q9NYV4 1490 aaPredicted RBP29.04■■■□□ 2.24
CERNA3-201ENST00000521403 FMN2Q9NZ56 1722 aa29.04■■■□□ 2.24
CERNA3-201ENST00000521403 COL22A1Q8NFW1 1626 aaPredicted RBP29.03■■■□□ 2.24
CERNA3-201ENST00000521403 SAFB2Q14151 953 aaKnown RBP eCLIP29.02■■■□□ 2.24
CERNA3-201ENST00000521403 RBM6P78332 1123 aaKnown RBP29.01■■■□□ 2.23
CERNA3-201ENST00000521403 PRAM1Q96QH2 718 aa29.01■■■□□ 2.23
CERNA3-201ENST00000521403 USP21Q9UK80 565 aa29■■■□□ 2.23
CERNA3-201ENST00000521403 UPF1Q92900 1129 aaKnown RBP eCLIP28.99■■■□□ 2.23
CERNA3-201ENST00000521403 KDM2AQ9Y2K7 1162 aa28.99■■■□□ 2.23
CERNA3-201ENST00000521403 RGS12O14924 1447 aa28.97■■■□□ 2.23
CERNA3-201ENST00000521403 KIF1AQ12756 1690 aa28.97■■■□□ 2.23
CERNA3-201ENST00000521403 DCAF11Q8TEB1 546 aa28.97■■■□□ 2.23
CERNA3-201ENST00000521403 POGKQ9P215 609 aa28.97■■■□□ 2.23
CERNA3-201ENST00000521403 HRCP23327 699 aa28.95■■■□□ 2.22
CERNA3-201ENST00000521403 FNBP4Q8N3X1 1017 aaPredicted RBP28.94■■■□□ 2.22
CERNA3-201ENST00000521403 KRT28Q7Z3Y7 464 aa28.93■■■□□ 2.22
CERNA3-201ENST00000521403 TRPC5Q9UL62 973 aaPredicted RBP28.93■■■□□ 2.22
CERNA3-201ENST00000521403 PHF8Q9UPP1 1060 aa28.93■■■□□ 2.22
CERNA3-201ENST00000521403 DLC1Q96QB1 1528 aa28.93■■■□□ 2.22
CERNA3-201ENST00000521403 RGPD8O14715 1765 aaPredicted RBP28.93■■■□□ 2.22
CERNA3-201ENST00000521403 TRAK1Q9UPV9 953 aa28.92■■■□□ 2.22
CERNA3-201ENST00000521403 ADGRB1O14514 1584 aa28.92■■■□□ 2.22
CERNA3-201ENST00000521403 SPATA31A3Q5VYP0 1347 aa28.92■■■□□ 2.22
CERNA3-201ENST00000521403 MARF1Q9Y4F3 1742 aaKnown RBP28.87■■■□□ 2.21
CERNA3-201ENST00000521403 HIRIP3Q9BW71 556 aaPredicted RBP28.87■■■□□ 2.21
CERNA3-201ENST00000521403 PSME1Q06323 249 aa28.86■■■□□ 2.21
CERNA3-201ENST00000521403 ATRNO75882 1429 aa28.86■■■□□ 2.21
CERNA3-201ENST00000521403 STAC3Q96MF2 364 aa28.85■■■□□ 2.21
CERNA3-201ENST00000521403 PLEKHG5O94827 1062 aa28.84■■■□□ 2.21
CERNA3-201ENST00000521403 MINK1Q8N4C8 1332 aaPredicted RBP28.84■■■□□ 2.21
CERNA3-201ENST00000521403 TNS3Q68CZ2 1445 aa28.84■■■□□ 2.21
CERNA3-201ENST00000521403 BCL9LQ86UU0 1499 aa28.84■■■□□ 2.21
CERNA3-201ENST00000521403 HAP1P54257 671 aaPredicted RBP28.83■■■□□ 2.21
CERNA3-201ENST00000521403 PMFBP1Q8TBY8 1022 aa28.83■■■□□ 2.21
CERNA3-201ENST00000521403 ANKARQ7Z5J8 1434 aa28.83■■■□□ 2.21
CERNA3-201ENST00000521403 ADGRB2O60241 1585 aa28.83■■■□□ 2.21
CERNA3-201ENST00000521403 LMOD2Q6P5Q4 547 aa28.82■■■□□ 2.2
CERNA3-201ENST00000521403 USP32Q8NFA0 1604 aa28.81■■■□□ 2.2
CERNA3-201ENST00000521403 SBNO1A3KN83 1393 aa28.78■■■□□ 2.2
CERNA3-201ENST00000521403 CABLES1Q8TDN4 633 aa28.78■■■□□ 2.2
CERNA3-201ENST00000521403 EIF3AQ14152 1382 aaKnown RBP28.77■■■□□ 2.2
CERNA3-201ENST00000521403 ATAD2Q6PL18 1390 aa28.76■■■□□ 2.2
CERNA3-201ENST00000521403 GJD4Q96KN9 370 aaPredicted RBP28.76■■■□□ 2.19
CERNA3-201ENST00000521403 ARHGEF10O15013 1369 aa28.75■■■□□ 2.19
CERNA3-201ENST00000521403 WASLO00401 505 aaPredicted RBP28.75■■■□□ 2.19
CERNA3-201ENST00000521403 UNC5CLQ8IV45 518 aa28.75■■■□□ 2.19
CERNA3-201ENST00000521403 SLIT2O94813 1529 aa28.74■■■□□ 2.19
CERNA3-201ENST00000521403 TULP4Q9NRJ4 1543 aa28.74■■■□□ 2.19
CERNA3-201ENST00000521403 PRR36Q9H6K5 1346 aa28.73■■■□□ 2.19
CERNA3-201ENST00000521403 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.72■■■□□ 2.19
CERNA3-201ENST00000521403 GPRASP1Q5JY77 1395 aa28.71■■■□□ 2.19
CERNA3-201ENST00000521403 ARHGEF28Q8N1W1 1705 aaKnown RBP28.71■■■□□ 2.19
CERNA3-201ENST00000521403 ABCA3Q99758 1704 aa28.68■■■□□ 2.18
CERNA3-201ENST00000521403 RALGAPBQ86X10 1494 aa28.67■■■□□ 2.18
CERNA3-201ENST00000521403 NGDNQ8NEJ9 315 aaKnown RBP28.67■■■□□ 2.18
CERNA3-201ENST00000521403 TRPM3Q9HCF6 1732 aaPredicted RBP28.66■■■□□ 2.18
CERNA3-201ENST00000521403 GLI3P10071 1580 aa28.65■■■□□ 2.18
CERNA3-201ENST00000521403 PLCH1Q4KWH8 1693 aa28.64■■■□□ 2.17
CERNA3-201ENST00000521403 PAK3O75914 559 aaPredicted RBP28.63■■■□□ 2.17
CERNA3-201ENST00000521403 CCDC9Q9Y3X0 531 aaKnown RBP28.63■■■□□ 2.17
CERNA3-201ENST00000521403 NUDT16Q96DE0 195 aaKnown RBP28.62■■■□□ 2.17
CERNA3-201ENST00000521403 EP400Q96L91 3159 aa28.61■■■□□ 2.17
CERNA3-201ENST00000521403 ATP7BP35670 1465 aa28.61■■■□□ 2.17
CERNA3-201ENST00000521403 KIAA1210Q9ULL0 1709 aa28.61■■■□□ 2.17
CERNA3-201ENST00000521403 ALS2Q96Q42 1657 aa28.61■■■□□ 2.17
CERNA3-201ENST00000521403 NWD2Q9ULI1 1742 aa28.6■■■□□ 2.17
CERNA3-201ENST00000521403 FAM83GA6ND36 823 aa28.6■■■□□ 2.17
CERNA3-201ENST00000521403 VPS72Q15906 364 aa28.6■■■□□ 2.17
CERNA3-201ENST00000521403 NBPF1Q3BBV0 1214 aa28.6■■■□□ 2.17
CERNA3-201ENST00000521403 CDK19Q9BWU1 502 aa28.6■■■□□ 2.17
CERNA3-201ENST00000521403 ITSN1Q15811 1721 aa28.6■■■□□ 2.17
CERNA3-201ENST00000521403 SEPT12Q8IYM1 358 aa28.54■■■□□ 2.16
CERNA3-201ENST00000521403 BTG4Q9NY30 223 aa28.54■■■□□ 2.16
CERNA3-201ENST00000521403 CCDC125Q86Z20 511 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms