RNA–Protein interactions for RNA: ENST00000521398.5

LAMA4-215, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,330 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-215ENST00000521398 ST20-MTHFSA0A0A6YYL1 179 aa27.42■■□□□ 1.98
LAMA4-215ENST00000521398 ADGRB2O60241 1585 aa27.42■■□□□ 1.98
LAMA4-215ENST00000521398 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.42■■□□□ 1.98
LAMA4-215ENST00000521398 HSPA5P11021 654 aaKnown RBP27.41■■□□□ 1.98
LAMA4-215ENST00000521398 SAFB2Q14151 953 aaKnown RBP eCLIP27.41■■□□□ 1.98
LAMA4-215ENST00000521398 NALCNQ8IZF0 1738 aa27.4■■□□□ 1.98
LAMA4-215ENST00000521398 IQSEC2Q5JU85 1478 aa27.4■■□□□ 1.98
LAMA4-215ENST00000521398 DCCP43146 1447 aa27.4■■□□□ 1.98
LAMA4-215ENST00000521398 C14orf37Q86TY3 774 aa27.4■■□□□ 1.98
LAMA4-215ENST00000521398 C19orf44Q9H6X5 657 aa27.4■■□□□ 1.98
LAMA4-215ENST00000521398 MSH6P52701 1360 aa27.38■■□□□ 1.97
LAMA4-215ENST00000521398 CDC42BPGQ6DT37 1551 aa27.38■■□□□ 1.97
LAMA4-215ENST00000521398 RBM33Q96EV2 1170 aaKnown RBP27.38■■□□□ 1.97
LAMA4-215ENST00000521398 MINK1Q8N4C8 1332 aaPredicted RBP27.36■■□□□ 1.97
LAMA4-215ENST00000521398 TESK2Q96S53 571 aa27.36■■□□□ 1.97
LAMA4-215ENST00000521398 EVC2Q86UK5 1308 aa27.32■■□□□ 1.96
LAMA4-215ENST00000521398 WASLO00401 505 aaPredicted RBP27.31■■□□□ 1.96
LAMA4-215ENST00000521398 CADPS2Q86UW7 1296 aa27.31■■□□□ 1.96
LAMA4-215ENST00000521398 CERKQ8TCT0 537 aa27.31■■□□□ 1.96
LAMA4-215ENST00000521398 HIRIP3Q9BW71 556 aaPredicted RBP27.31■■□□□ 1.96
LAMA4-215ENST00000521398 TULP4Q9NRJ4 1543 aa27.3■■□□□ 1.96
LAMA4-215ENST00000521398 ATF3P18847 181 aa27.29■■□□□ 1.96
LAMA4-215ENST00000521398 TMF1P82094 1093 aa27.29■■□□□ 1.96
LAMA4-215ENST00000521398 FMN2Q9NZ56 1722 aa27.28■■□□□ 1.96
LAMA4-215ENST00000521398 PUS7Q96PZ0 661 aaKnown RBP27.26■■□□□ 1.95
LAMA4-215ENST00000521398 CDCA8Q53HL2 280 aa27.25■■□□□ 1.95
LAMA4-215ENST00000521398 CDK19Q9BWU1 502 aa27.25■■□□□ 1.95
LAMA4-215ENST00000521398 ANKARQ7Z5J8 1434 aa27.25■■□□□ 1.95
LAMA4-215ENST00000521398 DISP3Q9P2K9 1392 aa27.21■■□□□ 1.95
LAMA4-215ENST00000521398 SRPK2P78362 688 aaKnown RBP27.21■■□□□ 1.95
LAMA4-215ENST00000521398 MST1RQ04912 1400 aa27.21■■□□□ 1.95
LAMA4-215ENST00000521398 ATAD2Q6PL18 1390 aa27.2■■□□□ 1.94
LAMA4-215ENST00000521398 ATP7BP35670 1465 aa27.18■■□□□ 1.94
LAMA4-215ENST00000521398 C1orf167Q5SNV9 1468 aa27.17■■□□□ 1.94
LAMA4-215ENST00000521398 TOM1O60784 492 aa27.17■■□□□ 1.94
LAMA4-215ENST00000521398 CABP2Q9NPB3 220 aa27.17■■□□□ 1.94
LAMA4-215ENST00000521398 USP32Q8NFA0 1604 aa27.17■■□□□ 1.94
LAMA4-215ENST00000521398 SLAIN2Q9P270 581 aa27.16■■□□□ 1.94
LAMA4-215ENST00000521398 ITSN1Q15811 1721 aa27.16■■□□□ 1.94
LAMA4-215ENST00000521398 NUDT16Q96DE0 195 aaKnown RBP27.16■■□□□ 1.94
LAMA4-215ENST00000521398 PRR36Q9H6K5 1346 aa27.14■■□□□ 1.94
LAMA4-215ENST00000521398 CCDC61Q9Y6R9 512 aa27.14■■□□□ 1.93
LAMA4-215ENST00000521398 TOPAZ1Q8N9V7 1692 aa27.13■■□□□ 1.93
LAMA4-215ENST00000521398 NUTM2FA1L443 756 aa27.13■■□□□ 1.93
LAMA4-215ENST00000521398 NINLQ9Y2I6 1382 aa27.13■■□□□ 1.93
LAMA4-215ENST00000521398 UBAP1LF5GYI3 381 aa27.11■■□□□ 1.93
LAMA4-215ENST00000521398 C11orf95C9JLR9 678 aaPredicted RBP27.1■■□□□ 1.93
LAMA4-215ENST00000521398 RGPD8O14715 1765 aaPredicted RBP27.1■■□□□ 1.93
LAMA4-215ENST00000521398 KIF7Q2M1P5 1343 aa27.09■■□□□ 1.93
LAMA4-215ENST00000521398 KIF1AQ12756 1690 aa27.09■■□□□ 1.93
LAMA4-215ENST00000521398 ESCO1Q5FWF5 840 aa27.08■■□□□ 1.93
LAMA4-215ENST00000521398 PPIP5K1Q6PFW1 1433 aa27.08■■□□□ 1.93
LAMA4-215ENST00000521398 CCDC7Q96M83 1385 aa27.07■■□□□ 1.92
LAMA4-215ENST00000521398 PLEKHG3A1L390 1219 aa27.06■■□□□ 1.92
LAMA4-215ENST00000521398 ORAI2Q96SN7 254 aa27.05■■□□□ 1.92
LAMA4-215ENST00000521398 PHF8Q9UPP1 1060 aa27.05■■□□□ 1.92
LAMA4-215ENST00000521398 WASHC2AQ641Q2 1341 aa27.05■■□□□ 1.92
LAMA4-215ENST00000521398 BRINP3Q76B58 766 aa27.04■■□□□ 1.92
LAMA4-215ENST00000521398 CABP1Q9NZU7 370 aa27.04■■□□□ 1.92
LAMA4-215ENST00000521398 ZNF316A6NFI3 1004 aaPredicted RBP27.03■■□□□ 1.92
LAMA4-215ENST00000521398 MYOM1P52179 1685 aa27.03■■□□□ 1.92
LAMA4-215ENST00000521398 ROBO1Q9Y6N7 1651 aa27.02■■□□□ 1.92
LAMA4-215ENST00000521398 TMC1Q8TDI8 760 aa27.02■■□□□ 1.92
LAMA4-215ENST00000521398 POLR3GLQ9BT43 218 aa27.02■■□□□ 1.92
LAMA4-215ENST00000521398 POLR3AO14802 1390 aaPredicted RBP27.02■■□□□ 1.92
LAMA4-215ENST00000521398 NGDNQ8NEJ9 315 aaKnown RBP26.98■■□□□ 1.91
LAMA4-215ENST00000521398 PMFBP1Q8TBY8 1022 aa26.98■■□□□ 1.91
LAMA4-215ENST00000521398 SLC12A5Q9H2X9 1139 aa26.98■■□□□ 1.91
LAMA4-215ENST00000521398 TERF2IPQ9NYB0 399 aa26.98■■□□□ 1.91
LAMA4-215ENST00000521398 ACEP12821 1306 aa26.97■■□□□ 1.91
LAMA4-215ENST00000521398 NPHP3Q7Z494 1330 aa26.97■■□□□ 1.91
LAMA4-215ENST00000521398 ZNF692Q9BU19 519 aaPredicted RBP26.97■■□□□ 1.91
LAMA4-215ENST00000521398 CPSF1Q10570 1443 aaKnown RBP26.97■■□□□ 1.91
LAMA4-215ENST00000521398 ANKRD36BQ8N2N9 1353 aa26.96■■□□□ 1.91
LAMA4-215ENST00000521398 PIP4K2BP78356 416 aa26.96■■□□□ 1.91
LAMA4-215ENST00000521398 NHSL1Q5SYE7 1610 aa26.95■■□□□ 1.91
LAMA4-215ENST00000521398 HDGFL2Q7Z4V5 671 aaPredicted RBP26.95■■□□□ 1.91
LAMA4-215ENST00000521398 CD163L1Q9NR16 1453 aa26.95■■□□□ 1.9
LAMA4-215ENST00000521398 AHDC1Q5TGY3 1603 aaPredicted RBP26.95■■□□□ 1.9
LAMA4-215ENST00000521398 SCAF1Q9H7N4 1312 aaKnown RBP26.95■■□□□ 1.9
LAMA4-215ENST00000521398 AKAP12Q02952 1782 aa26.94■■□□□ 1.9
LAMA4-215ENST00000521398 BRD4O60885 1362 aaPredicted RBP26.94■■□□□ 1.9
LAMA4-215ENST00000521398 FOXO3O43524 673 aa26.93■■□□□ 1.9
LAMA4-215ENST00000521398 A0A1W2PP64 1363 aa26.92■■□□□ 1.9
LAMA4-215ENST00000521398 MON2Q7Z3U7 1717 aa26.91■■□□□ 1.9
LAMA4-215ENST00000521398 USP6P35125 1406 aa26.91■■□□□ 1.9
LAMA4-215ENST00000521398 PSME1Q06323 249 aa26.9■■□□□ 1.9
LAMA4-215ENST00000521398 KTN1Q86UP2 1357 aaKnown RBP26.9■■□□□ 1.9
LAMA4-215ENST00000521398 PXDNQ92626 1479 aa26.88■■□□□ 1.89
LAMA4-215ENST00000521398 SOS2Q07890 1332 aaPredicted RBP26.88■■□□□ 1.89
LAMA4-215ENST00000521398 EDC4Q6P2E9 1401 aaKnown RBP26.87■■□□□ 1.89
LAMA4-215ENST00000521398 KRT28Q7Z3Y7 464 aa26.87■■□□□ 1.89
LAMA4-215ENST00000521398 FBXO41Q8TF61 875 aa26.87■■□□□ 1.89
LAMA4-215ENST00000521398 PANK3Q9H999 370 aa26.86■■□□□ 1.89
LAMA4-215ENST00000521398 NRKQ7Z2Y5 1582 aa26.85■■□□□ 1.89
LAMA4-215ENST00000521398 SBNO1A3KN83 1393 aa26.85■■□□□ 1.89
LAMA4-215ENST00000521398 SSH2Q76I76 1423 aa26.85■■□□□ 1.89
LAMA4-215ENST00000521398 PHLPP1O60346 1717 aa26.84■■□□□ 1.89
LAMA4-215ENST00000521398 DDX17Q92841 729 aaKnown RBP26.84■■□□□ 1.89
LAMA4-215ENST00000521398 TRPM3Q9HCF6 1732 aaPredicted RBP26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms