RNA–Protein interactions for RNA: ENST00000521179.5

TVP23C-206, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-206ENST00000521179 SALL2Q9Y467 1007 aaPredicted RBP11.68□□□□□ -0.54
TVP23C-206ENST00000521179 ZPR1O75312 459 aa11.67□□□□□ -0.54
TVP23C-206ENST00000521179 GUCA2AQ02747 115 aa11.66□□□□□ -0.54
TVP23C-206ENST00000521179 ZNF516Q92618 1163 aa11.66□□□□□ -0.54
TVP23C-206ENST00000521179 POLR3EQ9NVU0 708 aa11.66□□□□□ -0.54
TVP23C-206ENST00000521179 LIMD1Q9UGP4 676 aa11.66□□□□□ -0.54
TVP23C-206ENST00000521179 PCDHGC3Q9UN70 934 aa11.66□□□□□ -0.54
TVP23C-206ENST00000521179 CLK2P49760 499 aaKnown RBP11.65□□□□□ -0.54
TVP23C-206ENST00000521179 KCNC4Q03721 635 aa11.65□□□□□ -0.54
TVP23C-206ENST00000521179 Q3C1V9 767 aa11.65□□□□□ -0.54
TVP23C-206ENST00000521179 THAP11Q96EK4 314 aa11.65□□□□□ -0.54
TVP23C-206ENST00000521179 TMEM132AQ24JP5 1023 aa11.64□□□□□ -0.55
TVP23C-206ENST00000521179 PCDHB15Q9Y5E8 787 aa11.64□□□□□ -0.55
TVP23C-206ENST00000521179 SHROOM4Q9ULL8 1493 aa11.63□□□□□ -0.55
TVP23C-206ENST00000521179 BRICD5Q6PL45 260 aa11.63□□□□□ -0.55
TVP23C-206ENST00000521179 IFFO2Q5TF58 517 aa11.62□□□□□ -0.55
TVP23C-206ENST00000521179 FMNL1O95466 1100 aaPredicted RBP11.61□□□□□ -0.55
TVP23C-206ENST00000521179 PRPF38BQ5VTL8 546 aaKnown RBP11.61□□□□□ -0.55
TVP23C-206ENST00000521179 PROCA1Q8NCQ7 364 aaPredicted RBP11.61□□□□□ -0.55
TVP23C-206ENST00000521179 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.61□□□□□ -0.55
TVP23C-206ENST00000521179 RNF19BQ6ZMZ0 732 aa11.6□□□□□ -0.55
TVP23C-206ENST00000521179 PCMTD1Q96MG8 357 aaPredicted RBP11.6□□□□□ -0.55
TVP23C-206ENST00000521179 SPSB2Q99619 263 aa11.59□□□□□ -0.55
TVP23C-206ENST00000521179 CUX2O14529 1486 aa11.58□□□□□ -0.56
TVP23C-206ENST00000521179 LILRB3O75022 631 aa11.58□□□□□ -0.56
TVP23C-206ENST00000521179 NKX2-3Q8TAU0 364 aa11.58□□□□□ -0.56
TVP23C-206ENST00000521179 SYMPKQ92797 1274 aaKnown RBP11.58□□□□□ -0.56
TVP23C-206ENST00000521179 SPDYE5A6NIY4 337 aa11.57□□□□□ -0.56
TVP23C-206ENST00000521179 TLL1O43897 1013 aa11.57□□□□□ -0.56
TVP23C-206ENST00000521179 ADH1BP00325 375 aa11.57□□□□□ -0.56
TVP23C-206ENST00000521179 HRCP23327 699 aa11.57□□□□□ -0.56
TVP23C-206ENST00000521179 MTMR2Q13614 643 aa11.57□□□□□ -0.56
TVP23C-206ENST00000521179 ZBTB3Q9H5J0 574 aa11.57□□□□□ -0.56
TVP23C-206ENST00000521179 PLA2G2EQ9NZK7 142 aa11.57□□□□□ -0.56
TVP23C-206ENST00000521179 C6orf229H3BNL8 230 aa11.56□□□□□ -0.56
TVP23C-206ENST00000521179 QPCTQ16769 361 aa11.56□□□□□ -0.56
TVP23C-206ENST00000521179 CSPP1Q1MSJ5 1256 aa11.56□□□□□ -0.56
TVP23C-206ENST00000521179 RETREG3Q86VR2 466 aa11.56□□□□□ -0.56
TVP23C-206ENST00000521179 USB1Q9BQ65 265 aaKnown RBP11.56□□□□□ -0.56
TVP23C-206ENST00000521179 PPP2R2DQ66LE6 453 aa11.55□□□□□ -0.56
TVP23C-206ENST00000521179 FAM160A2Q8N612 972 aaPredicted RBP11.55□□□□□ -0.56
TVP23C-206ENST00000521179 CABLES1Q8TDN4 633 aa11.55□□□□□ -0.56
TVP23C-206ENST00000521179 MSS51Q4VC12 460 aa11.54□□□□□ -0.56
TVP23C-206ENST00000521179 EIF4G1Q04637 1599 aaKnown RBP11.54□□□□□ -0.56
TVP23C-206ENST00000521179 ATP1B4Q9UN42 357 aaPredicted RBP11.53□□□□□ -0.56
TVP23C-206ENST00000521179 NUTM2BA6NNL0 878 aaPredicted RBP11.52□□□□□ -0.57
TVP23C-206ENST00000521179 NUTM2EB1AL46 878 aaPredicted RBP11.52□□□□□ -0.57
TVP23C-206ENST00000521179 RTL5Q5HYW3 569 aaPredicted RBP11.52□□□□□ -0.57
TVP23C-206ENST00000521179 NUTM2DQ5VT03 806 aaPredicted RBP11.52□□□□□ -0.57
TVP23C-206ENST00000521179 FBXO31Q5XUX0 539 aaPredicted RBP11.52□□□□□ -0.57
TVP23C-206ENST00000521179 NUTM2AQ8IVF1 878 aaPredicted RBP11.52□□□□□ -0.57
TVP23C-206ENST00000521179 PRR7Q8TB68 274 aa11.51□□□□□ -0.57
TVP23C-206ENST00000521179 SLC6A16Q9GZN6 736 aa11.51□□□□□ -0.57
TVP23C-206ENST00000521179 CFAP99D6REC4 459 aa11.49□□□□□ -0.57
TVP23C-206ENST00000521179 DESI1Q6ICB0 168 aa11.49□□□□□ -0.57
TVP23C-206ENST00000521179 MMP16P51512 607 aa11.48□□□□□ -0.57
TVP23C-206ENST00000521179 S1PR4O95977 384 aa11.47□□□□□ -0.57
TVP23C-206ENST00000521179 DXOO77932 396 aaKnown RBP11.46□□□□□ -0.57
TVP23C-206ENST00000521179 JUNDP17535 347 aa11.46□□□□□ -0.57
TVP23C-206ENST00000521179 RFC5P40937 340 aa11.46□□□□□ -0.57
TVP23C-206ENST00000521179 PPP1R18Q6NYC8 613 aa11.46□□□□□ -0.57
TVP23C-206ENST00000521179 PRDM9Q9NQV7 894 aa11.46□□□□□ -0.57
TVP23C-206ENST00000521179 GGCXP38435 758 aa11.45□□□□□ -0.58
TVP23C-206ENST00000521179 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.45□□□□□ -0.58
TVP23C-206ENST00000521179 A0A0G2JS52 829 aa11.44□□□□□ -0.58
TVP23C-206ENST00000521179 TMEM259Q4ZIN3 620 aa11.43□□□□□ -0.58
TVP23C-206ENST00000521179 RNF223E7ERA6 249 aa11.42□□□□□ -0.58
TVP23C-206ENST00000521179 LYPD8Q6UX82 237 aa11.42□□□□□ -0.58
TVP23C-206ENST00000521179 HELBQ8NG08 1087 aaPredicted RBP11.41□□□□□ -0.58
TVP23C-206ENST00000521179 CTDSPL2Q05D32 466 aa11.4□□□□□ -0.58
TVP23C-206ENST00000521179 PTPRNQ16849 979 aa11.4□□□□□ -0.58
TVP23C-206ENST00000521179 ANKLE1Q8NAG6 615 aa11.4□□□□□ -0.58
TVP23C-206ENST00000521179 PPEF1O14829 653 aaPredicted RBP11.39□□□□□ -0.59
TVP23C-206ENST00000521179 TSC1Q92574 1164 aa11.39□□□□□ -0.59
TVP23C-206ENST00000521179 AP1G2O75843 785 aa11.38□□□□□ -0.59
TVP23C-206ENST00000521179 BANK1Q8NDB2 785 aa11.38□□□□□ -0.59
TVP23C-206ENST00000521179 PER1O15534 1290 aaPredicted RBP11.37□□□□□ -0.59
TVP23C-206ENST00000521179 FCF1Q9Y324 198 aaKnown RBP11.37□□□□□ -0.59
TVP23C-206ENST00000521179 NUDT12Q9BQG2 462 aa11.36□□□□□ -0.59
TVP23C-206ENST00000521179 CCNYL3P0C7X3 344 aa11.35□□□□□ -0.59
TVP23C-206ENST00000521179 EVA1BQ9NVM1 165 aa11.35□□□□□ -0.59
TVP23C-206ENST00000521179 USP17L8P0C7I0 530 aa11.33□□□□□ -0.6
TVP23C-206ENST00000521179 F12P00748 615 aaPredicted RBP11.32□□□□□ -0.6
TVP23C-206ENST00000521179 KCNH2Q12809 1159 aa11.32□□□□□ -0.6
TVP23C-206ENST00000521179 PLA2G2CQ5R387 149 aa11.32□□□□□ -0.6
TVP23C-206ENST00000521179 CCDC24Q8N4L8 307 aa11.32□□□□□ -0.6
TVP23C-206ENST00000521179 LRRN4Q8WUT4 740 aa11.32□□□□□ -0.6
TVP23C-206ENST00000521179 SOCS7O14512 581 aa11.3□□□□□ -0.6
TVP23C-206ENST00000521179 EMID1Q96A84 441 aaPredicted RBP11.3□□□□□ -0.6
TVP23C-206ENST00000521179 PTCRAQ6ISU1 281 aaPredicted RBP11.29□□□□□ -0.6
TVP23C-206ENST00000521179 ERCC6Q03468 1493 aa11.28□□□□□ -0.6
TVP23C-206ENST00000521179 RGS20O76081 388 aa11.28□□□□□ -0.6
TVP23C-206ENST00000521179 RPIAP49247 311 aa11.28□□□□□ -0.6
TVP23C-206ENST00000521179 LIAT1Q6ZQX7 453 aa11.28□□□□□ -0.6
TVP23C-206ENST00000521179 SNRKQ9NRH2 765 aa11.28□□□□□ -0.6
TVP23C-206ENST00000521179 CTHP32929 405 aa11.27□□□□□ -0.61
TVP23C-206ENST00000521179 HMX1Q9NP08 348 aaPredicted RBP11.27□□□□□ -0.61
TVP23C-206ENST00000521179 MAP10Q9P2G4 905 aa11.27□□□□□ -0.61
TVP23C-206ENST00000521179 SMARCA4P51532 1647 aa11.27□□□□□ -0.61
TVP23C-206ENST00000521179 SLC19A1P41440 591 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms