RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 STK26Q9P289 416 aa17.26■□□□□ 0.35
MRPS28-206ENST00000520946 LRPPRCP42704 1394 aaKnown RBP17.26■□□□□ 0.35
MRPS28-206ENST00000520946 FOXO3O43524 673 aa17.25■□□□□ 0.35
MRPS28-206ENST00000520946 HAP1P54257 671 aaPredicted RBP17.25■□□□□ 0.35
MRPS28-206ENST00000520946 XPCQ01831 940 aaPredicted RBP17.25■□□□□ 0.35
MRPS28-206ENST00000520946 NUTM2FA1L443 756 aa17.24■□□□□ 0.35
MRPS28-206ENST00000520946 CCDC125Q86Z20 511 aa17.23■□□□□ 0.35
MRPS28-206ENST00000520946 RGL3Q3MIN7 710 aa17.22■□□□□ 0.35
MRPS28-206ENST00000520946 NAIPQ13075 1403 aa17.21■□□□□ 0.35
MRPS28-206ENST00000520946 GJD4Q96KN9 370 aaPredicted RBP17.2■□□□□ 0.34
MRPS28-206ENST00000520946 SF3B2Q13435 895 aaKnown RBP17.19■□□□□ 0.34
MRPS28-206ENST00000520946 ATRNO75882 1429 aa17.19■□□□□ 0.34
MRPS28-206ENST00000520946 WAPLQ7Z5K2 1190 aa17.18■□□□□ 0.34
MRPS28-206ENST00000520946 LAMC1P11047 1609 aa17.18■□□□□ 0.34
MRPS28-206ENST00000520946 PLEKHG5O94827 1062 aa17.17■□□□□ 0.34
MRPS28-206ENST00000520946 RRBP1Q9P2E9 1410 aaKnown RBP17.16■□□□□ 0.34
MRPS28-206ENST00000520946 CCDC9Q9Y3X0 531 aaKnown RBP17.16■□□□□ 0.34
MRPS28-206ENST00000520946 ADGRF5Q8IZF2 1346 aa17.16■□□□□ 0.34
MRPS28-206ENST00000520946 CCDC144AA2RUR9 1427 aa17.15■□□□□ 0.34
MRPS28-206ENST00000520946 PSME1Q06323 249 aa17.15■□□□□ 0.34
MRPS28-206ENST00000520946 LMOD2Q6P5Q4 547 aa17.15■□□□□ 0.34
MRPS28-206ENST00000520946 UNC5CLQ8IV45 518 aa17.15■□□□□ 0.34
MRPS28-206ENST00000520946 PRAG1Q86YV5 1406 aa17.14■□□□□ 0.33
MRPS28-206ENST00000520946 MYOM2P54296 1465 aa17.14■□□□□ 0.33
MRPS28-206ENST00000520946 TMEM132EQ6IEE7 984 aa17.14■□□□□ 0.33
MRPS28-206ENST00000520946 KRT28Q7Z3Y7 464 aa17.14■□□□□ 0.33
MRPS28-206ENST00000520946 COL22A1Q8NFW1 1626 aaPredicted RBP17.14■□□□□ 0.33
MRPS28-206ENST00000520946 CDC42BPGQ6DT37 1551 aa17.13■□□□□ 0.33
MRPS28-206ENST00000520946 ANKRD30BQ9BXX2 1392 aa17.13■□□□□ 0.33
MRPS28-206ENST00000520946 PPLO60437 1756 aa17.12■□□□□ 0.33
MRPS28-206ENST00000520946 BCL9LQ86UU0 1499 aa17.12■□□□□ 0.33
MRPS28-206ENST00000520946 A0A0G2JS52 829 aa17.12■□□□□ 0.33
MRPS28-206ENST00000520946 MYT1Q01538 1121 aa17.12■□□□□ 0.33
MRPS28-206ENST00000520946 PXDNQ92626 1479 aa17.12■□□□□ 0.33
MRPS28-206ENST00000520946 SPATA31A3Q5VYP0 1347 aa17.11■□□□□ 0.33
MRPS28-206ENST00000520946 ABCC11Q96J66 1382 aa17.09■□□□□ 0.33
MRPS28-206ENST00000520946 SEPT12Q8IYM1 358 aa17.08■□□□□ 0.32
MRPS28-206ENST00000520946 MPHOSPH9Q99550 1183 aa17.08■□□□□ 0.32
MRPS28-206ENST00000520946 PHF8Q9UPP1 1060 aa17.08■□□□□ 0.32
MRPS28-206ENST00000520946 BLMP54132 1417 aaPredicted RBP17.07■□□□□ 0.32
MRPS28-206ENST00000520946 PLEKHH1Q9ULM0 1364 aa17.07■□□□□ 0.32
MRPS28-206ENST00000520946 RALGAPBQ86X10 1494 aa17.06■□□□□ 0.32
MRPS28-206ENST00000520946 SAFB2Q14151 953 aaKnown RBP eCLIP17.06■□□□□ 0.32
MRPS28-206ENST00000520946 CABLES1Q8TDN4 633 aa17.06■□□□□ 0.32
MRPS28-206ENST00000520946 POGKQ9P215 609 aa17.06■□□□□ 0.32
MRPS28-206ENST00000520946 MARF1Q9Y4F3 1742 aaKnown RBP17.06■□□□□ 0.32
MRPS28-206ENST00000520946 TECPR2O15040 1411 aa17.05■□□□□ 0.32
MRPS28-206ENST00000520946 DHX57Q6P158 1386 aaKnown RBP17.05■□□□□ 0.32
MRPS28-206ENST00000520946 YTHDC2Q9H6S0 1430 aaKnown RBP17.04■□□□□ 0.32
MRPS28-206ENST00000520946 VPS72Q15906 364 aa17.04■□□□□ 0.32
MRPS28-206ENST00000520946 DEFB132Q7Z7B7 95 aa17.04■□□□□ 0.32
MRPS28-206ENST00000520946 SIRT1Q96EB6 747 aa17.04■□□□□ 0.32
MRPS28-206ENST00000520946 SLIT2O94813 1529 aa17.03■□□□□ 0.32
MRPS28-206ENST00000520946 KRT27Q7Z3Y8 459 aa17.03■□□□□ 0.32
MRPS28-206ENST00000520946 KIF1AQ12756 1690 aa17.03■□□□□ 0.32
MRPS28-206ENST00000520946 PRAM1Q96QH2 718 aa17.02■□□□□ 0.32
MRPS28-206ENST00000520946 TNS3Q68CZ2 1445 aa17.02■□□□□ 0.31
MRPS28-206ENST00000520946 ARHGEF10O15013 1369 aa17.02■□□□□ 0.31
MRPS28-206ENST00000520946 BAG6P46379 1132 aa17.01■□□□□ 0.31
MRPS28-206ENST00000520946 PMFBP1Q8TBY8 1022 aa17.01■□□□□ 0.31
MRPS28-206ENST00000520946 C14orf93Q9H972 538 aaKnown RBP17.01■□□□□ 0.31
MRPS28-206ENST00000520946 SPATA31E1Q6ZUB1 1445 aa17.01■□□□□ 0.31
MRPS28-206ENST00000520946 ACIN1Q9UKV3 1341 aaKnown RBP17■□□□□ 0.31
MRPS28-206ENST00000520946 PIK3C2GO75747 1445 aa17■□□□□ 0.31
MRPS28-206ENST00000520946 CFAP70Q5T0N1 1121 aa17■□□□□ 0.31
MRPS28-206ENST00000520946 TNKS1BP1Q9C0C2 1729 aaKnown RBP17■□□□□ 0.31
MRPS28-206ENST00000520946 FMN2Q9NZ56 1722 aa16.99■□□□□ 0.31
MRPS28-206ENST00000520946 SBNO1A3KN83 1393 aa16.99■□□□□ 0.31
MRPS28-206ENST00000520946 USP32Q8NFA0 1604 aa16.99■□□□□ 0.31
MRPS28-206ENST00000520946 GLI3P10071 1580 aa16.98■□□□□ 0.31
MRPS28-206ENST00000520946 GPRASP1Q5JY77 1395 aa16.98■□□□□ 0.31
MRPS28-206ENST00000520946 KNDC1Q76NI1 1749 aa16.98■□□□□ 0.31
MRPS28-206ENST00000520946 FAM83GA6ND36 823 aa16.97■□□□□ 0.31
MRPS28-206ENST00000520946 PAK3O75914 559 aaPredicted RBP16.96■□□□□ 0.31
MRPS28-206ENST00000520946 FAM98CQ17RN3 349 aaKnown RBP16.96■□□□□ 0.31
MRPS28-206ENST00000520946 BTG4Q9NY30 223 aa16.96■□□□□ 0.31
MRPS28-206ENST00000520946 ONECUT3O60422 494 aaPredicted RBP16.95■□□□□ 0.3
MRPS28-206ENST00000520946 PSDA5PKW4 1024 aaPredicted RBP16.94■□□□□ 0.3
MRPS28-206ENST00000520946 NGDNQ8NEJ9 315 aaKnown RBP16.94■□□□□ 0.3
MRPS28-206ENST00000520946 HIRIP3Q9BW71 556 aaPredicted RBP16.94■□□□□ 0.3
MRPS28-206ENST00000520946 TRAK1Q9UPV9 953 aa16.94■□□□□ 0.3
MRPS28-206ENST00000520946 BRWD3Q6RI45 1802 aa16.93■□□□□ 0.3
MRPS28-206ENST00000520946 NRXN1Q9ULB1 1477 aa16.93■□□□□ 0.3
MRPS28-206ENST00000520946 IFT172Q9UG01 1749 aa16.93■□□□□ 0.3
MRPS28-206ENST00000520946 RGPD8O14715 1765 aaPredicted RBP16.92■□□□□ 0.3
MRPS28-206ENST00000520946 EIF3AQ14152 1382 aaKnown RBP16.92■□□□□ 0.3
MRPS28-206ENST00000520946 KDM2AQ9Y2K7 1162 aa16.92■□□□□ 0.3
MRPS28-206ENST00000520946 MINK1Q8N4C8 1332 aaPredicted RBP16.92■□□□□ 0.3
MRPS28-206ENST00000520946 ANKARQ7Z5J8 1434 aa16.91■□□□□ 0.3
MRPS28-206ENST00000520946 NWD2Q9ULI1 1742 aa16.9■□□□□ 0.3
MRPS28-206ENST00000520946 PRDM11Q9NQV5 511 aa16.9■□□□□ 0.3
MRPS28-206ENST00000520946 PLCH1Q4KWH8 1693 aa16.9■□□□□ 0.3
MRPS28-206ENST00000520946 EN1Q05925 392 aaPredicted RBP16.89■□□□□ 0.29
MRPS28-206ENST00000520946 FAM182BQ5T319 152 aa16.87■□□□□ 0.29
MRPS28-206ENST00000520946 DCAF11Q8TEB1 546 aa16.87■□□□□ 0.29
MRPS28-206ENST00000520946 EP400Q96L91 3159 aa16.86■□□□□ 0.29
MRPS28-206ENST00000520946 WASLO00401 505 aaPredicted RBP16.86■□□□□ 0.29
MRPS28-206ENST00000520946 HRCP23327 699 aa16.86■□□□□ 0.29
MRPS28-206ENST00000520946 EVA1CP58658 441 aa16.86■□□□□ 0.29
MRPS28-206ENST00000520946 STRN4Q9NRL3 753 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms