RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 ZRANB1Q9UGI0 708 aa13.4□□□□□ -0.26
SPARC-202ENST00000520687 UGGT1Q9NYU2 1555 aa13.39□□□□□ -0.27
SPARC-202ENST00000520687 PIK3C2GO75747 1445 aa13.39□□□□□ -0.27
SPARC-202ENST00000520687 CFAP70Q5T0N1 1121 aa13.39□□□□□ -0.27
SPARC-202ENST00000520687 KNSTRNQ9Y448 316 aa13.39□□□□□ -0.27
SPARC-202ENST00000520687 SMG6Q86US8 1419 aaKnown RBP13.39□□□□□ -0.27
SPARC-202ENST00000520687 TNRQ92752 1358 aa13.38□□□□□ -0.27
SPARC-202ENST00000520687 JCADQ9P266 1359 aa13.38□□□□□ -0.27
SPARC-202ENST00000520687 RXRBP28702 533 aa13.38□□□□□ -0.27
SPARC-202ENST00000520687 ROBO1Q9Y6N7 1651 aa13.37□□□□□ -0.27
SPARC-202ENST00000520687 CHGAP10645 457 aaKnown RBP13.37□□□□□ -0.27
SPARC-202ENST00000520687 PDE3BQ13370 1112 aa13.37□□□□□ -0.27
SPARC-202ENST00000520687 CENPJQ9HC77 1338 aaPredicted RBP13.35□□□□□ -0.27
SPARC-202ENST00000520687 MEX3CQ5U5Q3 659 aaKnown RBP13.35□□□□□ -0.27
SPARC-202ENST00000520687 NLRP1Q9C000 1473 aa13.34□□□□□ -0.27
SPARC-202ENST00000520687 ASXL1Q8IXJ9 1541 aa13.33□□□□□ -0.27
SPARC-202ENST00000520687 NUDCQ9Y266 331 aa13.33□□□□□ -0.28
SPARC-202ENST00000520687 KDM5AP29375 1690 aaKnown RBP13.33□□□□□ -0.28
SPARC-202ENST00000520687 SPATA31A6Q5VVP1 1343 aa13.33□□□□□ -0.28
SPARC-202ENST00000520687 AMER1Q5JTC6 1135 aaPredicted RBP13.32□□□□□ -0.28
SPARC-202ENST00000520687 XIRP1Q702N8 1843 aaKnown RBP13.32□□□□□ -0.28
SPARC-202ENST00000520687 IDI1Q13907 227 aa13.32□□□□□ -0.28
SPARC-202ENST00000520687 ERVK-7P63135 1459 aa13.32□□□□□ -0.28
SPARC-202ENST00000520687 ADGRB1O14514 1584 aa13.32□□□□□ -0.28
SPARC-202ENST00000520687 PHLPP1O60346 1717 aa13.31□□□□□ -0.28
SPARC-202ENST00000520687 RBM33Q96EV2 1170 aaKnown RBP13.31□□□□□ -0.28
SPARC-202ENST00000520687 MYO5BQ9ULV0 1848 aa13.31□□□□□ -0.28
SPARC-202ENST00000520687 TMEM131LA2VDJ0 1609 aa13.31□□□□□ -0.28
SPARC-202ENST00000520687 NEXMIFQ5QGS0 1516 aa13.31□□□□□ -0.28
SPARC-202ENST00000520687 CC2D1BQ5T0F9 858 aaKnown RBP13.3□□□□□ -0.28
SPARC-202ENST00000520687 CNGB1Q14028 1251 aaPredicted RBP13.28□□□□□ -0.28
SPARC-202ENST00000520687 PPP4R2Q9NY27 417 aa13.28□□□□□ -0.28
SPARC-202ENST00000520687 RNF123Q5XPI4 1314 aa13.28□□□□□ -0.28
SPARC-202ENST00000520687 LRP6O75581 1613 aa13.28□□□□□ -0.28
SPARC-202ENST00000520687 BLMP54132 1417 aaPredicted RBP13.28□□□□□ -0.28
SPARC-202ENST00000520687 PPP2R1AP30153 589 aa13.28□□□□□ -0.28
SPARC-202ENST00000520687 NGEFQ8N5V2 710 aa13.28□□□□□ -0.28
SPARC-202ENST00000520687 EVC2Q86UK5 1308 aa13.27□□□□□ -0.28
SPARC-202ENST00000520687 NINLQ9Y2I6 1382 aa13.27□□□□□ -0.28
SPARC-202ENST00000520687 IFFO2Q5TF58 517 aa13.27□□□□□ -0.29
SPARC-202ENST00000520687 FBXO31Q5XUX0 539 aaPredicted RBP13.27□□□□□ -0.29
SPARC-202ENST00000520687 TSHZ2Q9NRE2 1034 aa13.27□□□□□ -0.29
SPARC-202ENST00000520687 TRAK1Q9UPV9 953 aa13.25□□□□□ -0.29
SPARC-202ENST00000520687 ATAD2Q6PL18 1390 aa13.25□□□□□ -0.29
SPARC-202ENST00000520687 NUTM2BA6NNL0 878 aaPredicted RBP13.24□□□□□ -0.29
SPARC-202ENST00000520687 NUTM2EB1AL46 878 aaPredicted RBP13.24□□□□□ -0.29
SPARC-202ENST00000520687 WDR43Q15061 677 aaKnown RBP eCLIP13.24□□□□□ -0.29
SPARC-202ENST00000520687 NUTM2DQ5VT03 806 aaPredicted RBP13.24□□□□□ -0.29
SPARC-202ENST00000520687 NUTM2AQ8IVF1 878 aaPredicted RBP13.24□□□□□ -0.29
SPARC-202ENST00000520687 MYOM1P52179 1685 aa13.24□□□□□ -0.29
SPARC-202ENST00000520687 HDGFP51858 240 aaKnown RBP13.24□□□□□ -0.29
SPARC-202ENST00000520687 RGS12O14924 1447 aa13.23□□□□□ -0.29
SPARC-202ENST00000520687 COL16A1Q07092 1604 aaPredicted RBP13.23□□□□□ -0.29
SPARC-202ENST00000520687 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.23□□□□□ -0.29
SPARC-202ENST00000520687 NSD2O96028 1365 aa13.23□□□□□ -0.29
SPARC-202ENST00000520687 TMEM94Q12767 1356 aa13.23□□□□□ -0.29
SPARC-202ENST00000520687 BCANQ96GW7 911 aa13.22□□□□□ -0.29
SPARC-202ENST00000520687 STAG3Q9UJ98 1225 aa13.22□□□□□ -0.29
SPARC-202ENST00000520687 LRP5O75197 1615 aa13.22□□□□□ -0.29
SPARC-202ENST00000520687 QRICH2Q9H0J4 1663 aa13.21□□□□□ -0.3
SPARC-202ENST00000520687 CGNL1Q0VF96 1302 aa13.2□□□□□ -0.3
SPARC-202ENST00000520687 TMEM132EQ6IEE7 984 aa13.2□□□□□ -0.3
SPARC-202ENST00000520687 SHPRHQ149N8 1683 aa13.2□□□□□ -0.3
SPARC-202ENST00000520687 CARD14Q9BXL6 1004 aa13.2□□□□□ -0.3
SPARC-202ENST00000520687 ARHGEF28Q8N1W1 1705 aaKnown RBP13.19□□□□□ -0.3
SPARC-202ENST00000520687 USP32Q8NFA0 1604 aa13.19□□□□□ -0.3
SPARC-202ENST00000520687 POLR3AO14802 1390 aaPredicted RBP13.19□□□□□ -0.3
SPARC-202ENST00000520687 RBM6P78332 1123 aaKnown RBP13.19□□□□□ -0.3
SPARC-202ENST00000520687 ANKRD36BQ8N2N9 1353 aa13.18□□□□□ -0.3
SPARC-202ENST00000520687 SLAIN2Q9P270 581 aa13.18□□□□□ -0.3
SPARC-202ENST00000520687 ADAMTS8Q9UP79 889 aa13.18□□□□□ -0.3
SPARC-202ENST00000520687 YTHDC2Q9H6S0 1430 aaKnown RBP13.18□□□□□ -0.3
SPARC-202ENST00000520687 MSH6P52701 1360 aa13.17□□□□□ -0.3
SPARC-202ENST00000520687 CCDC125Q86Z20 511 aa13.17□□□□□ -0.3
SPARC-202ENST00000520687 AFF2P51816 1311 aa13.16□□□□□ -0.3
SPARC-202ENST00000520687 DLC1Q96QB1 1528 aa13.16□□□□□ -0.3
SPARC-202ENST00000520687 NCBP3Q53F19 620 aaKnown RBP13.16□□□□□ -0.3
SPARC-202ENST00000520687 SIRT1Q96EB6 747 aa13.16□□□□□ -0.3
SPARC-202ENST00000520687 UBR1Q8IWV7 1749 aa13.16□□□□□ -0.3
SPARC-202ENST00000520687 MORC1Q86VD1 984 aa13.15□□□□□ -0.3
SPARC-202ENST00000520687 RCAN3Q9UKA8 241 aa13.15□□□□□ -0.3
SPARC-202ENST00000520687 NSD3Q9BZ95 1437 aa13.15□□□□□ -0.3
SPARC-202ENST00000520687 RIMS2Q9UQ26 1411 aa13.15□□□□□ -0.3
SPARC-202ENST00000520687 PROSER2Q86WR7 435 aaPredicted RBP13.15□□□□□ -0.3
SPARC-202ENST00000520687 NGLY1Q96IV0 654 aa13.15□□□□□ -0.3
SPARC-202ENST00000520687 SLC12A5Q9H2X9 1139 aa13.15□□□□□ -0.3
SPARC-202ENST00000520687 TERF2IPQ9NYB0 399 aa13.15□□□□□ -0.3
SPARC-202ENST00000520687 POGKQ9P215 609 aa13.15□□□□□ -0.3
SPARC-202ENST00000520687 CFAP53Q96M91 514 aa13.14□□□□□ -0.31
SPARC-202ENST00000520687 TULP4Q9NRJ4 1543 aa13.14□□□□□ -0.31
SPARC-202ENST00000520687 ABCC11Q96J66 1382 aa13.14□□□□□ -0.31
SPARC-202ENST00000520687 QTRT2Q9H974 415 aaKnown RBP13.13□□□□□ -0.31
SPARC-202ENST00000520687 NKTRP30414 1462 aaKnown RBP13.13□□□□□ -0.31
SPARC-202ENST00000520687 SLIT1O75093 1534 aa13.12□□□□□ -0.31
SPARC-202ENST00000520687 KCNA6P17658 529 aa13.12□□□□□ -0.31
SPARC-202ENST00000520687 TXNDC2Q86VQ3 553 aa13.12□□□□□ -0.31
SPARC-202ENST00000520687 EID1Q9Y6B2 187 aa13.12□□□□□ -0.31
SPARC-202ENST00000520687 AHDC1Q5TGY3 1603 aaPredicted RBP13.12□□□□□ -0.31
SPARC-202ENST00000520687 RRP1P56182 461 aaKnown RBP13.11□□□□□ -0.31
SPARC-202ENST00000520687 IRX6P78412 446 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms