RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-223	ENST00000520520	ADAMTS13	Q76LX8	1427 aa		11.97	□□□□□ -0.49
CTNNA1-223	ENST00000520520	NUP155	O75694	1391 aa		11.97	□□□□□ -0.49
CTNNA1-223	ENST00000520520	MKRN4P	Q13434	485 aa	Predicted RBP	11.97	□□□□□ -0.49
CTNNA1-223	ENST00000520520	AMOTL2	Q9Y2J4	779 aa		11.97	□□□□□ -0.49
CTNNA1-223	ENST00000520520	CADPS2	Q86UW7	1296 aa		11.96	□□□□□ -0.49
CTNNA1-223	ENST00000520520	C19orf44	Q9H6X5	657 aa		11.96	□□□□□ -0.49
CTNNA1-223	ENST00000520520	IQGAP3	Q86VI3	1631 aa		11.95	□□□□□ -0.5
CTNNA1-223	ENST00000520520	TRPM2	O94759	1503 aa		11.95	□□□□□ -0.5
CTNNA1-223	ENST00000520520	PTPRU	Q92729	1446 aa		11.94	□□□□□ -0.5
CTNNA1-223	ENST00000520520	SPATA31A6	Q5VVP1	1343 aa		11.94	□□□□□ -0.5
CTNNA1-223	ENST00000520520	DIP2A	Q14689	1571 aa		11.94	□□□□□ -0.5
CTNNA1-223	ENST00000520520	ZNF772	Q68DY9	489 aa	Predicted RBP	11.93	□□□□□ -0.5
CTNNA1-223	ENST00000520520	BRINP3	Q76B58	766 aa		11.93	□□□□□ -0.5
CTNNA1-223	ENST00000520520	DDX17	Q92841	729 aa	Known RBP	11.93	□□□□□ -0.5
CTNNA1-223	ENST00000520520	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.93	□□□□□ -0.5
CTNNA1-223	ENST00000520520	SHPRH	Q149N8	1683 aa		11.92	□□□□□ -0.5
CTNNA1-223	ENST00000520520	NCOA3	Q9Y6Q9	1424 aa		11.92	□□□□□ -0.5
CTNNA1-223	ENST00000520520	ROCK1	Q13464	1354 aa		11.92	□□□□□ -0.5
CTNNA1-223	ENST00000520520	PIK3R4	Q99570	1358 aa		11.91	□□□□□ -0.5
CTNNA1-223	ENST00000520520	RXRB	P28702	533 aa		11.9	□□□□□ -0.5
CTNNA1-223	ENST00000520520	SPHKAP	Q2M3C7	1700 aa		11.9	□□□□□ -0.5
CTNNA1-223	ENST00000520520	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
CTNNA1-223	ENST00000520520	C8orf37	Q96NL8	207 aa		11.9	□□□□□ -0.5
CTNNA1-223	ENST00000520520	ASXL1	Q8IXJ9	1541 aa		11.9	□□□□□ -0.5
CTNNA1-223	ENST00000520520	AFF2	P51816	1311 aa		11.89	□□□□□ -0.51
CTNNA1-223	ENST00000520520	MET	P08581	1390 aa		11.89	□□□□□ -0.51
CTNNA1-223	ENST00000520520	NRXN3	Q9Y4C0	1643 aa		11.89	□□□□□ -0.51
CTNNA1-223	ENST00000520520	FKBP8	Q14318	412 aa		11.88	□□□□□ -0.51
CTNNA1-223	ENST00000520520	TSHZ2	Q9NRE2	1034 aa		11.88	□□□□□ -0.51
CTNNA1-223	ENST00000520520	XRN1	Q8IZH2	1706 aa	Known RBP	11.88	□□□□□ -0.51
CTNNA1-223	ENST00000520520	ADAMTS2	O95450	1211 aa		11.87	□□□□□ -0.51
CTNNA1-223	ENST00000520520	MST1R	Q04912	1400 aa		11.86	□□□□□ -0.51
CTNNA1-223	ENST00000520520	SETBP1	Q9Y6X0	1596 aa		11.86	□□□□□ -0.51
CTNNA1-223	ENST00000520520	NALCN	Q8IZF0	1738 aa		11.86	□□□□□ -0.51
CTNNA1-223	ENST00000520520	CLTCL1	P53675	1640 aa		11.86	□□□□□ -0.51
CTNNA1-223	ENST00000520520	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.85	□□□□□ -0.51
CTNNA1-223	ENST00000520520	ERICH6B	Q5W0A0	696 aa		11.85	□□□□□ -0.51
CTNNA1-223	ENST00000520520	LRRC59	Q96AG4	307 aa	Known RBP	11.85	□□□□□ -0.51
CTNNA1-223	ENST00000520520	NHSL1	Q5SYE7	1610 aa		11.85	□□□□□ -0.51
CTNNA1-223	ENST00000520520	DCC	P43146	1447 aa		11.85	□□□□□ -0.51
CTNNA1-223	ENST00000520520	QTRT2	Q9H974	415 aa	Known RBP	11.84	□□□□□ -0.51
CTNNA1-223	ENST00000520520	NEXMIF	Q5QGS0	1516 aa		11.83	□□□□□ -0.52
CTNNA1-223	ENST00000520520	NGLY1	Q96IV0	654 aa		11.83	□□□□□ -0.52
CTNNA1-223	ENST00000520520	ADGRL3	Q9HAR2	1447 aa		11.83	□□□□□ -0.52
CTNNA1-223	ENST00000520520	PNPLA6	Q8IY17	1366 aa		11.82	□□□□□ -0.52
CTNNA1-223	ENST00000520520	KIF1B	O60333	1816 aa		11.82	□□□□□ -0.52
CTNNA1-223	ENST00000520520	RGS12	O14924	1447 aa		11.81	□□□□□ -0.52
CTNNA1-223	ENST00000520520	ORAI2	Q96SN7	254 aa		11.81	□□□□□ -0.52
CTNNA1-223	ENST00000520520	RBM6	P78332	1123 aa	Known RBP	11.8	□□□□□ -0.52
CTNNA1-223	ENST00000520520	ANP32E	Q9BTT0	268 aa		11.8	□□□□□ -0.52
CTNNA1-223	ENST00000520520	C1orf167	Q5SNV9	1468 aa		11.8	□□□□□ -0.52
CTNNA1-223	ENST00000520520	HSPA5	P11021	654 aa	Known RBP	11.79	□□□□□ -0.52
CTNNA1-223	ENST00000520520	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.79	□□□□□ -0.52
CTNNA1-223	ENST00000520520	ROBO2	Q9HCK4	1378 aa		11.79	□□□□□ -0.52
CTNNA1-223	ENST00000520520	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.78	□□□□□ -0.52
CTNNA1-223	ENST00000520520	NUTM2F	A1L443	756 aa		11.78	□□□□□ -0.52
CTNNA1-223	ENST00000520520	XPC	Q01831	940 aa	Predicted RBP	11.78	□□□□□ -0.52
CTNNA1-223	ENST00000520520	MPHOSPH9	Q99550	1183 aa		11.78	□□□□□ -0.52
CTNNA1-223	ENST00000520520	USP21	Q9UK80	565 aa		11.78	□□□□□ -0.52
CTNNA1-223	ENST00000520520	VGF	O15240	615 aa	Predicted RBP	11.77	□□□□□ -0.53
CTNNA1-223	ENST00000520520	PLEKHG5	O94827	1062 aa		11.77	□□□□□ -0.53
CTNNA1-223	ENST00000520520	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.77	□□□□□ -0.53
CTNNA1-223	ENST00000520520	CCDC7	Q96M83	1385 aa		11.77	□□□□□ -0.53
CTNNA1-223	ENST00000520520	ESCO1	Q5FWF5	840 aa		11.76	□□□□□ -0.53
CTNNA1-223	ENST00000520520	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.76	□□□□□ -0.53
CTNNA1-223	ENST00000520520	STK26	Q9P289	416 aa		11.76	□□□□□ -0.53
CTNNA1-223	ENST00000520520	WASHC2A	Q641Q2	1341 aa		11.76	□□□□□ -0.53
CTNNA1-223	ENST00000520520	ANKRD30B	Q9BXX2	1392 aa		11.76	□□□□□ -0.53
CTNNA1-223	ENST00000520520	PTCH1	Q13635	1447 aa		11.75	□□□□□ -0.53
CTNNA1-223	ENST00000520520	RGL3	Q3MIN7	710 aa		11.74	□□□□□ -0.53
CTNNA1-223	ENST00000520520	SOS2	Q07890	1332 aa	Predicted RBP	11.73	□□□□□ -0.53
CTNNA1-223	ENST00000520520	TRPC5	Q9UL62	973 aa	Predicted RBP	11.73	□□□□□ -0.53
CTNNA1-223	ENST00000520520	SRCAP	Q6ZRS2	3230 aa		11.73	□□□□□ -0.53
CTNNA1-223	ENST00000520520	PPL	O60437	1756 aa		11.72	□□□□□ -0.53
CTNNA1-223	ENST00000520520	ROCK2	O75116	1388 aa	Known RBP	11.72	□□□□□ -0.53
CTNNA1-223	ENST00000520520	ATAD2	Q6PL18	1390 aa		11.72	□□□□□ -0.53
CTNNA1-223	ENST00000520520	FOXO3	O43524	673 aa		11.72	□□□□□ -0.53
CTNNA1-223	ENST00000520520	ZBED9	Q6R2W3	1325 aa		11.71	□□□□□ -0.53
CTNNA1-223	ENST00000520520	WAPL	Q7Z5K2	1190 aa		11.71	□□□□□ -0.53
CTNNA1-223	ENST00000520520	NPHP3	Q7Z494	1330 aa		11.7	□□□□□ -0.54
CTNNA1-223	ENST00000520520	ADGRF5	Q8IZF2	1346 aa		11.7	□□□□□ -0.54
CTNNA1-223	ENST00000520520	TMEM132E	Q6IEE7	984 aa		11.7	□□□□□ -0.54
CTNNA1-223	ENST00000520520	L3MBTL2	Q969R5	705 aa		11.7	□□□□□ -0.54
CTNNA1-223	ENST00000520520	EP400	Q96L91	3159 aa		11.69	□□□□□ -0.54
CTNNA1-223	ENST00000520520	RPGRIP1L	Q68CZ1	1315 aa		11.69	□□□□□ -0.54
CTNNA1-223	ENST00000520520	LAMC1	P11047	1609 aa		11.69	□□□□□ -0.54
CTNNA1-223	ENST00000520520	HAP1	P54257	671 aa	Predicted RBP	11.68	□□□□□ -0.54
CTNNA1-223	ENST00000520520	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.68	□□□□□ -0.54
CTNNA1-223	ENST00000520520	PPP4R2	Q9NY27	417 aa		11.68	□□□□□ -0.54
CTNNA1-223	ENST00000520520	RALGAPB	Q86X10	1494 aa		11.68	□□□□□ -0.54
CTNNA1-223	ENST00000520520	ATRN	O75882	1429 aa		11.68	□□□□□ -0.54
CTNNA1-223	ENST00000520520	SPATA31E1	Q6ZUB1	1445 aa		11.68	□□□□□ -0.54
CTNNA1-223	ENST00000520520	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.68	□□□□□ -0.54
CTNNA1-223	ENST00000520520	PLEKHH1	Q9ULM0	1364 aa		11.67	□□□□□ -0.54
CTNNA1-223	ENST00000520520	CDC42BPG	Q6DT37	1551 aa		11.67	□□□□□ -0.54
CTNNA1-223	ENST00000520520	LMOD2	Q6P5Q4	547 aa		11.67	□□□□□ -0.54
CTNNA1-223	ENST00000520520	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.67	□□□□□ -0.54
CTNNA1-223	ENST00000520520	MRS2	Q9HD23	443 aa		11.67	□□□□□ -0.54
CTNNA1-223	ENST00000520520	RBM19	Q9Y4C8	960 aa	Known RBP	11.67	□□□□□ -0.54
CTNNA1-223	ENST00000520520	PXDN	Q92626	1479 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms