RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 PLA2G2CQ5R387 149 aa10.57□□□□□ -0.72
SKP1-207ENST00000520417 Q6ZNB5 142 aa10.57□□□□□ -0.72
SKP1-207ENST00000520417 LIAT1Q6ZQX7 453 aa10.57□□□□□ -0.72
SKP1-207ENST00000520417 C6orf229H3BNL8 230 aa10.56□□□□□ -0.72
SKP1-207ENST00000520417 MSS51Q4VC12 460 aa10.56□□□□□ -0.72
SKP1-207ENST00000520417 EMID1Q96A84 441 aaPredicted RBP10.56□□□□□ -0.72
SKP1-207ENST00000520417 MOXD2PA6NHM9 499 aa10.55□□□□□ -0.72
SKP1-207ENST00000520417 SPRYD7Q5W111 196 aa10.55□□□□□ -0.72
SKP1-207ENST00000520417 PDZRN3Q9UPQ7 1066 aa10.55□□□□□ -0.72
SKP1-207ENST00000520417 ZNF697Q5TEC3 545 aa10.54□□□□□ -0.72
SKP1-207ENST00000520417 CCDC24Q8N4L8 307 aa10.54□□□□□ -0.72
SKP1-207ENST00000520417 TBC1D2Q9BYX2 928 aa10.54□□□□□ -0.72
SKP1-207ENST00000520417 ZBTB24O43167 697 aaPredicted RBP10.53□□□□□ -0.72
SKP1-207ENST00000520417 LAPTM4AQ15012 233 aa10.52□□□□□ -0.73
SKP1-207ENST00000520417 ZNF598Q86UK7 904 aaKnown RBP10.52□□□□□ -0.73
SKP1-207ENST00000520417 PCDHGC3Q9UN70 934 aa10.52□□□□□ -0.73
SKP1-207ENST00000520417 FOXC1Q12948 553 aa10.5□□□□□ -0.73
SKP1-207ENST00000520417 DIXDC1Q155Q3 683 aa10.5□□□□□ -0.73
SKP1-207ENST00000520417 CSPP1Q1MSJ5 1256 aa10.5□□□□□ -0.73
SKP1-207ENST00000520417 TNFRSF10AO00220 468 aa10.49□□□□□ -0.73
SKP1-207ENST00000520417 RETREG3Q86VR2 466 aa10.49□□□□□ -0.73
SKP1-207ENST00000520417 NRG2O14511 850 aaPredicted RBP10.48□□□□□ -0.73
SKP1-207ENST00000520417 CD2BP2O95400 341 aaKnown RBP10.48□□□□□ -0.73
SKP1-207ENST00000520417 MMP16P51512 607 aa10.48□□□□□ -0.73
SKP1-207ENST00000520417 DXOO77932 396 aaKnown RBP10.47□□□□□ -0.73
SKP1-207ENST00000520417 JUNDP17535 347 aa10.46□□□□□ -0.73
SKP1-207ENST00000520417 RPIAP49247 311 aa10.46□□□□□ -0.73
SKP1-207ENST00000520417 MTMR2Q13614 643 aa10.46□□□□□ -0.73
SKP1-207ENST00000520417 RSBN1LQ6PCB5 846 aaPredicted RBP10.46□□□□□ -0.73
SKP1-207ENST00000520417 RIC3Q7Z5B4 369 aa10.46□□□□□ -0.73
SKP1-207ENST00000520417 GPBP1L1Q9HC44 474 aaPredicted RBP10.45□□□□□ -0.74
SKP1-207ENST00000520417 ATP1B4Q9UN42 357 aaPredicted RBP10.45□□□□□ -0.74
SKP1-207ENST00000520417 TRIM67Q6ZTA4 783 aa10.44□□□□□ -0.74
SKP1-207ENST00000520417 PRR7Q8TB68 274 aa10.44□□□□□ -0.74
SKP1-207ENST00000520417 PCDHB15Q9Y5E8 787 aa10.44□□□□□ -0.74
SKP1-207ENST00000520417 NUDT12Q9BQG2 462 aa10.43□□□□□ -0.74
SKP1-207ENST00000520417 TSC1Q92574 1164 aa10.42□□□□□ -0.74
SKP1-207ENST00000520417 NUTM2BA6NNL0 878 aaPredicted RBP10.41□□□□□ -0.74
SKP1-207ENST00000520417 NUTM2EB1AL46 878 aaPredicted RBP10.41□□□□□ -0.74
SKP1-207ENST00000520417 SPTLC1O15269 473 aa10.41□□□□□ -0.74
SKP1-207ENST00000520417 TRIM32Q13049 653 aa10.41□□□□□ -0.74
SKP1-207ENST00000520417 NUTM2DQ5VT03 806 aaPredicted RBP10.41□□□□□ -0.74
SKP1-207ENST00000520417 MYSM1Q5VVJ2 828 aa10.41□□□□□ -0.74
SKP1-207ENST00000520417 NUTM2AQ8IVF1 878 aaPredicted RBP10.41□□□□□ -0.74
SKP1-207ENST00000520417 KDM4CQ9H3R0 1056 aa10.41□□□□□ -0.74
SKP1-207ENST00000520417 POLR3EQ9NVU0 708 aa10.41□□□□□ -0.74
SKP1-207ENST00000520417 SPDYE5A6NIY4 337 aa10.4□□□□□ -0.74
SKP1-207ENST00000520417 GDF9O60383 454 aa10.4□□□□□ -0.74
SKP1-207ENST00000520417 PKDCCQ504Y2 493 aa10.4□□□□□ -0.74
SKP1-207ENST00000520417 TRAF7Q6Q0C0 670 aa10.4□□□□□ -0.74
SKP1-207ENST00000520417 CABLES1Q8TDN4 633 aa10.4□□□□□ -0.74
SKP1-207ENST00000520417 ZBTB3Q9H5J0 574 aa10.4□□□□□ -0.74
SKP1-207ENST00000520417 FAM187AA6NFU0 413 aa10.39□□□□□ -0.75
SKP1-207ENST00000520417 HRCP23327 699 aa10.39□□□□□ -0.75
SKP1-207ENST00000520417 LIMD1Q9UGP4 676 aa10.39□□□□□ -0.75
SKP1-207ENST00000520417 GJA5P36382 358 aa10.38□□□□□ -0.75
SKP1-207ENST00000520417 PRR20EP86478 221 aa10.38□□□□□ -0.75
SKP1-207ENST00000520417 PRR20CP86479 221 aa10.38□□□□□ -0.75
SKP1-207ENST00000520417 PRR20DP86480 221 aa10.38□□□□□ -0.75
SKP1-207ENST00000520417 PRR20BP86481 221 aa10.38□□□□□ -0.75
SKP1-207ENST00000520417 PRR20AP86496 221 aa10.38□□□□□ -0.75
SKP1-207ENST00000520417 PKD2L1Q9P0L9 805 aa10.38□□□□□ -0.75
SKP1-207ENST00000520417 CCNYL3P0C7X3 344 aa10.37□□□□□ -0.75
SKP1-207ENST00000520417 CYP4X1Q8N118 509 aa10.37□□□□□ -0.75
SKP1-207ENST00000520417 RSPH6AQ9H0K4 717 aa10.37□□□□□ -0.75
SKP1-207ENST00000520417 CLK2P49760 499 aaKnown RBP10.36□□□□□ -0.75
SKP1-207ENST00000520417 TPRNQ4KMQ1 711 aa10.36□□□□□ -0.75
SKP1-207ENST00000520417 PTCRAQ6ISU1 281 aaPredicted RBP10.36□□□□□ -0.75
SKP1-207ENST00000520417 FAM117AQ9C073 453 aa10.36□□□□□ -0.75
SKP1-207ENST00000520417 TTC24A2A3L6 582 aaPredicted RBP10.35□□□□□ -0.75
SKP1-207ENST00000520417 CFAP99D6REC4 459 aa10.35□□□□□ -0.75
SKP1-207ENST00000520417 CTHP32929 405 aa10.35□□□□□ -0.75
SKP1-207ENST00000520417 QPCTQ16769 361 aa10.35□□□□□ -0.75
SKP1-207ENST00000520417 PTPRNQ16849 979 aa10.35□□□□□ -0.75
SKP1-207ENST00000520417 NEUROD2Q15784 382 aa10.34□□□□□ -0.75
SKP1-207ENST00000520417 PRPF38BQ5VTL8 546 aaKnown RBP10.34□□□□□ -0.75
SKP1-207ENST00000520417 DDRGK1Q96HY6 314 aa10.32□□□□□ -0.76
SKP1-207ENST00000520417 WNT7AO00755 349 aa10.31□□□□□ -0.76
SKP1-207ENST00000520417 LCE2BO14633 110 aa10.31□□□□□ -0.76
SKP1-207ENST00000520417 DGAT1O75907 488 aa10.31□□□□□ -0.76
SKP1-207ENST00000520417 KCNH2Q12809 1159 aa10.31□□□□□ -0.76
SKP1-207ENST00000520417 LINC01559Q495D7 138 aa10.31□□□□□ -0.76
SKP1-207ENST00000520417 DESI1Q6ICB0 168 aa10.31□□□□□ -0.76
SKP1-207ENST00000520417 MRGPRX2Q96LB1 330 aa10.31□□□□□ -0.76
SKP1-207ENST00000520417 UNC93B1Q9H1C4 597 aa10.31□□□□□ -0.76
SKP1-207ENST00000520417 EVA1BQ9NVM1 165 aa10.31□□□□□ -0.76
SKP1-207ENST00000520417 SKOR1P84550 965 aa10.3□□□□□ -0.76
SKP1-207ENST00000520417 RC3H1Q5TC82 1133 aaKnown RBP10.3□□□□□ -0.76
SKP1-207ENST00000520417 LILRB3O75022 631 aa10.29□□□□□ -0.76
SKP1-207ENST00000520417 RTL5Q5HYW3 569 aaPredicted RBP10.29□□□□□ -0.76
SKP1-207ENST00000520417 LYPD8Q6UX82 237 aa10.29□□□□□ -0.76
SKP1-207ENST00000520417 WNT7BP56706 349 aa10.28□□□□□ -0.76
SKP1-207ENST00000520417 EHBP1Q8NDI1 1231 aa10.28□□□□□ -0.76
SKP1-207ENST00000520417 HELBQ8NG08 1087 aaPredicted RBP10.28□□□□□ -0.76
SKP1-207ENST00000520417 BAP1Q92560 729 aa10.28□□□□□ -0.76
SKP1-207ENST00000520417 TOR4AQ9NXH8 423 aa10.28□□□□□ -0.76
SKP1-207ENST00000520417 MYT1Q01538 1121 aa10.27□□□□□ -0.77
SKP1-207ENST00000520417 SKIV2LQ15477 1246 aaKnown RBP10.27□□□□□ -0.77
SKP1-207ENST00000520417 SNIP1Q8TAD8 396 aaKnown RBP10.27□□□□□ -0.77
SKP1-207ENST00000520417 MAP10Q9P2G4 905 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms