RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 FAM198AQ9UFP1 575 aa12□□□□□ -0.49
CTHRC1-203ENST00000520337 MTUS2Q5JR59 1369 aa12□□□□□ -0.49
CTHRC1-203ENST00000520337 UHRF1BP1LA0JNW5 1464 aa12□□□□□ -0.49
CTHRC1-203ENST00000520337 TTC13Q8NBP0 860 aa11.99□□□□□ -0.49
CTHRC1-203ENST00000520337 TATDN2Q93075 761 aa11.99□□□□□ -0.49
CTHRC1-203ENST00000520337 PHLDB1Q86UU1 1377 aa11.99□□□□□ -0.49
CTHRC1-203ENST00000520337 ARHGEF11O15085 1522 aa11.99□□□□□ -0.49
CTHRC1-203ENST00000520337 RRBP1Q9P2E9 1410 aaKnown RBP11.98□□□□□ -0.49
CTHRC1-203ENST00000520337 PNMA3Q9UL41 463 aa11.98□□□□□ -0.49
CTHRC1-203ENST00000520337 ADCY10Q96PN6 1610 aa11.97□□□□□ -0.49
CTHRC1-203ENST00000520337 NCOA2Q15596 1464 aa11.97□□□□□ -0.49
CTHRC1-203ENST00000520337 TSR3Q9UJK0 312 aaKnown RBP11.97□□□□□ -0.49
CTHRC1-203ENST00000520337 TROQ12816 1431 aaPredicted RBP11.95□□□□□ -0.5
CTHRC1-203ENST00000520337 SEMA3EO15041 775 aa11.95□□□□□ -0.5
CTHRC1-203ENST00000520337 PADI6Q6TGC4 694 aa11.95□□□□□ -0.5
CTHRC1-203ENST00000520337 CDK11AQ9UQ88 783 aaPredicted RBP11.95□□□□□ -0.5
CTHRC1-203ENST00000520337 ZCCHC11Q5TAX3 1644 aaKnown RBP11.95□□□□□ -0.5
CTHRC1-203ENST00000520337 KDM5BQ9UGL1 1544 aa11.95□□□□□ -0.5
CTHRC1-203ENST00000520337 SMAPO00193 183 aa11.94□□□□□ -0.5
CTHRC1-203ENST00000520337 NUDT18Q6ZVK8 323 aa11.94□□□□□ -0.5
CTHRC1-203ENST00000520337 WBP1LQ9NX94 342 aa11.94□□□□□ -0.5
CTHRC1-203ENST00000520337 KIF14Q15058 1648 aa11.93□□□□□ -0.5
CTHRC1-203ENST00000520337 A0A0G2JS52 829 aa11.93□□□□□ -0.5
CTHRC1-203ENST00000520337 PTGDRQ13258 359 aa11.93□□□□□ -0.5
CTHRC1-203ENST00000520337 IRX2Q9BZI1 471 aaPredicted RBP11.93□□□□□ -0.5
CTHRC1-203ENST00000520337 HPS5Q9UPZ3 1129 aa11.93□□□□□ -0.5
CTHRC1-203ENST00000520337 RIMBP3CA6NJZ7 1639 aa11.93□□□□□ -0.5
CTHRC1-203ENST00000520337 RIMBP3BA6NNM3 1639 aa11.93□□□□□ -0.5
CTHRC1-203ENST00000520337 RIMBP3Q9UFD9 1639 aa11.93□□□□□ -0.5
CTHRC1-203ENST00000520337 CCNB3Q8WWL7 1395 aa11.92□□□□□ -0.5
CTHRC1-203ENST00000520337 PLEKHD1A6NEE1 506 aa11.92□□□□□ -0.5
CTHRC1-203ENST00000520337 C3orf80F5H4A9 247 aa11.92□□□□□ -0.5
CTHRC1-203ENST00000520337 HDGFP51858 240 aaKnown RBP11.92□□□□□ -0.5
CTHRC1-203ENST00000520337 SMYD5Q6GMV2 418 aa11.92□□□□□ -0.5
CTHRC1-203ENST00000520337 MYOM3Q5VTT5 1437 aa11.92□□□□□ -0.5
CTHRC1-203ENST00000520337 ITGBL1O95965 494 aaPredicted RBP11.91□□□□□ -0.5
CTHRC1-203ENST00000520337 SAMD7Q7Z3H4 446 aa11.91□□□□□ -0.5
CTHRC1-203ENST00000520337 TESPA1A2RU30 521 aaPredicted RBP11.9□□□□□ -0.5
CTHRC1-203ENST00000520337 FGD6Q6ZV73 1430 aa11.9□□□□□ -0.5
CTHRC1-203ENST00000520337 CDC42BPAQ5VT25 1732 aa11.89□□□□□ -0.51
CTHRC1-203ENST00000520337 NUTM2FA1L443 756 aa11.89□□□□□ -0.51
CTHRC1-203ENST00000520337 PPP4CP60510 307 aa11.89□□□□□ -0.51
CTHRC1-203ENST00000520337 VSIG10Q8N0Z9 540 aa11.89□□□□□ -0.51
CTHRC1-203ENST00000520337 KDM2AQ9Y2K7 1162 aa11.89□□□□□ -0.51
CTHRC1-203ENST00000520337 ABCC10Q5T3U5 1492 aa11.89□□□□□ -0.51
CTHRC1-203ENST00000520337 NECTIN2Q92692 538 aa11.88□□□□□ -0.51
CTHRC1-203ENST00000520337 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.88□□□□□ -0.51
CTHRC1-203ENST00000520337 PTPN23Q9H3S7 1636 aa11.87□□□□□ -0.51
CTHRC1-203ENST00000520337 FCHSD2O94868 740 aa11.87□□□□□ -0.51
CTHRC1-203ENST00000520337 GPATCH8Q9UKJ3 1502 aaKnown RBP11.86□□□□□ -0.51
CTHRC1-203ENST00000520337 EYA1Q99502 592 aa11.86□□□□□ -0.51
CTHRC1-203ENST00000520337 TCOF1Q13428 1488 aaKnown RBP11.86□□□□□ -0.51
CTHRC1-203ENST00000520337 ITSN2Q9NZM3 1697 aa11.86□□□□□ -0.51
CTHRC1-203ENST00000520337 MIA2Q96PC5 1412 aa11.86□□□□□ -0.51
CTHRC1-203ENST00000520337 CDC42BPBQ9Y5S2 1711 aa11.85□□□□□ -0.51
CTHRC1-203ENST00000520337 FAM50AQ14320 339 aaKnown RBP11.84□□□□□ -0.51
CTHRC1-203ENST00000520337 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.83□□□□□ -0.52
CTHRC1-203ENST00000520337 SLC4A3P48751 1232 aa11.83□□□□□ -0.52
CTHRC1-203ENST00000520337 SLF2Q8IX21 1173 aa11.83□□□□□ -0.52
CTHRC1-203ENST00000520337 TTC37Q6PGP7 1564 aa11.83□□□□□ -0.52
CTHRC1-203ENST00000520337 KCNC4Q03721 635 aa11.82□□□□□ -0.52
CTHRC1-203ENST00000520337 CYB5RLQ6IPT4 315 aa11.82□□□□□ -0.52
CTHRC1-203ENST00000520337 RBM46Q8TBY0 533 aaKnown RBP11.82□□□□□ -0.52
CTHRC1-203ENST00000520337 WDR7Q9Y4E6 1490 aa11.82□□□□□ -0.52
CTHRC1-203ENST00000520337 MYO5CQ9NQX4 1742 aa11.81□□□□□ -0.52
CTHRC1-203ENST00000520337 ASXL2Q76L83 1435 aa11.81□□□□□ -0.52
CTHRC1-203ENST00000520337 HIC1Q14526 733 aa11.81□□□□□ -0.52
CTHRC1-203ENST00000520337 ADGRG1Q9Y653 693 aa11.81□□□□□ -0.52
CTHRC1-203ENST00000520337 PREX2Q70Z35 1606 aa11.81□□□□□ -0.52
CTHRC1-203ENST00000520337 DNAJB2P25686 324 aa11.8□□□□□ -0.52
CTHRC1-203ENST00000520337 SWT1Q5T5J6 900 aaKnown RBP11.8□□□□□ -0.52
CTHRC1-203ENST00000520337 ZNF644Q9H582 1327 aaPredicted RBP11.8□□□□□ -0.52
CTHRC1-203ENST00000520337 PTPRKQ15262 1439 aa11.79□□□□□ -0.52
CTHRC1-203ENST00000520337 RNF40O75150 1001 aa11.79□□□□□ -0.52
CTHRC1-203ENST00000520337 ITGAEP38570 1179 aa11.79□□□□□ -0.52
CTHRC1-203ENST00000520337 CFDP1Q9UEE9 299 aaPredicted RBP11.79□□□□□ -0.52
CTHRC1-203ENST00000520337 RBM26Q5T8P6 1007 aaKnown RBP11.78□□□□□ -0.52
CTHRC1-203ENST00000520337 ABCA9Q8IUA7 1624 aa11.78□□□□□ -0.52
CTHRC1-203ENST00000520337 CAMSAP2Q08AD1 1489 aa11.77□□□□□ -0.52
CTHRC1-203ENST00000520337 DNMT1P26358 1616 aaKnown RBP11.77□□□□□ -0.53
CTHRC1-203ENST00000520337 MAPKBP1O60336 1514 aa11.76□□□□□ -0.53
CTHRC1-203ENST00000520337 SAMD9LQ8IVG5 1584 aa11.75□□□□□ -0.53
CTHRC1-203ENST00000520337 OATP04181 439 aa11.75□□□□□ -0.53
CTHRC1-203ENST00000520337 TMEM134Q9H6X4 195 aa11.75□□□□□ -0.53
CTHRC1-203ENST00000520337 PLCH2O75038 1416 aa11.75□□□□□ -0.53
CTHRC1-203ENST00000520337 PRR14Q9BWN1 585 aa11.74□□□□□ -0.53
CTHRC1-203ENST00000520337 ABCC5O15440 1437 aa11.74□□□□□ -0.53
CTHRC1-203ENST00000520337 CROCC2H7BZ55 1655 aa11.74□□□□□ -0.53
CTHRC1-203ENST00000520337 GNPATO15228 680 aa11.73□□□□□ -0.53
CTHRC1-203ENST00000520337 DAPK1P53355 1430 aa11.73□□□□□ -0.53
CTHRC1-203ENST00000520337 ARHGAP5Q13017 1502 aa11.73□□□□□ -0.53
CTHRC1-203ENST00000520337 TJAP1Q5JTD0 557 aa11.73□□□□□ -0.53
CTHRC1-203ENST00000520337 ARAP3Q8WWN8 1544 aa11.73□□□□□ -0.53
CTHRC1-203ENST00000520337 ZNF777Q9ULD5 760 aaPredicted RBP11.73□□□□□ -0.53
CTHRC1-203ENST00000520337 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.72□□□□□ -0.53
CTHRC1-203ENST00000520337 RCCD1A6NED2 376 aa11.72□□□□□ -0.53
CTHRC1-203ENST00000520337 IL21Q9HBE4 155 aa11.72□□□□□ -0.53
CTHRC1-203ENST00000520337 ARHGEF5Q12774 1597 aa11.71□□□□□ -0.53
CTHRC1-203ENST00000520337 MBD5Q9P267 1494 aa11.71□□□□□ -0.53
CTHRC1-203ENST00000520337 SETD5Q9C0A6 1442 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms