RNA–Protein interactions for RNA: ENST00000520276.5

TRPS1-211, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2 BASIC

Gene TRPS1, Length 4,083 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-211ENST00000520276 HAP1P54257 671 aaPredicted RBP13.13□□□□□ -0.31
TRPS1-211ENST00000520276 MINK1Q8N4C8 1332 aaPredicted RBP13.12□□□□□ -0.31
TRPS1-211ENST00000520276 ARXQ96QS3 562 aa13.12□□□□□ -0.31
TRPS1-211ENST00000520276 CAMSAP1Q5T5Y3 1602 aa13.11□□□□□ -0.31
TRPS1-211ENST00000520276 ZC3H13Q5T200 1668 aaKnown RBP13.11□□□□□ -0.31
TRPS1-211ENST00000520276 RRP9O43818 475 aaKnown RBP13.11□□□□□ -0.31
TRPS1-211ENST00000520276 TMF1P82094 1093 aa13.11□□□□□ -0.31
TRPS1-211ENST00000520276 HSP90AA1P07900 732 aaKnown RBP13.11□□□□□ -0.31
TRPS1-211ENST00000520276 A0A0U1RQG5 324 aaPredicted RBP13.1□□□□□ -0.31
TRPS1-211ENST00000520276 PTPRTO14522 1441 aa13.1□□□□□ -0.31
TRPS1-211ENST00000520276 NPHP4O75161 1426 aaPredicted RBP13.09□□□□□ -0.31
TRPS1-211ENST00000520276 RBM33Q96EV2 1170 aaKnown RBP13.09□□□□□ -0.31
TRPS1-211ENST00000520276 PRAM1Q96QH2 718 aa13.09□□□□□ -0.31
TRPS1-211ENST00000520276 KIF7Q2M1P5 1343 aa13.09□□□□□ -0.31
TRPS1-211ENST00000520276 NBPF1Q3BBV0 1214 aa13.08□□□□□ -0.31
TRPS1-211ENST00000520276 SCAF11Q99590 1463 aaKnown RBP13.08□□□□□ -0.31
TRPS1-211ENST00000520276 C14orf93Q9H972 538 aaKnown RBP13.08□□□□□ -0.31
TRPS1-211ENST00000520276 CENPJQ9HC77 1338 aaPredicted RBP13.08□□□□□ -0.32
TRPS1-211ENST00000520276 PNNQ9H307 717 aaKnown RBP13.08□□□□□ -0.32
TRPS1-211ENST00000520276 PIP4K2BP78356 416 aa13.08□□□□□ -0.32
TRPS1-211ENST00000520276 NGDNQ8NEJ9 315 aaKnown RBP13.08□□□□□ -0.32
TRPS1-211ENST00000520276 KCNA6P17658 529 aa13.07□□□□□ -0.32
TRPS1-211ENST00000520276 TRPM2O94759 1503 aa13.07□□□□□ -0.32
TRPS1-211ENST00000520276 PLIN1O60240 522 aa13.07□□□□□ -0.32
TRPS1-211ENST00000520276 TOM1O60784 492 aa13.06□□□□□ -0.32
TRPS1-211ENST00000520276 EVC2Q86UK5 1308 aa13.05□□□□□ -0.32
TRPS1-211ENST00000520276 UBAP1LF5GYI3 381 aa13.05□□□□□ -0.32
TRPS1-211ENST00000520276 RCAN3Q9UKA8 241 aa13.05□□□□□ -0.32
TRPS1-211ENST00000520276 ST20-MTHFSA0A0A6YYL1 179 aa13.05□□□□□ -0.32
TRPS1-211ENST00000520276 NBPF8Q3BBV2 869 aa13.04□□□□□ -0.32
TRPS1-211ENST00000520276 WAPLQ7Z5K2 1190 aa13.04□□□□□ -0.32
TRPS1-211ENST00000520276 PNISRQ8TF01 805 aaKnown RBP13.04□□□□□ -0.32
TRPS1-211ENST00000520276 PLEKHG1Q9ULL1 1385 aa13.04□□□□□ -0.32
TRPS1-211ENST00000520276 ADAMTSL3P82987 1691 aa13.04□□□□□ -0.32
TRPS1-211ENST00000520276 PLA2R1Q13018 1463 aa13.03□□□□□ -0.32
TRPS1-211ENST00000520276 DEPDC5O75140 1603 aa13.03□□□□□ -0.32
TRPS1-211ENST00000520276 CEP170BQ9Y4F5 1589 aaPredicted RBP13.03□□□□□ -0.32
TRPS1-211ENST00000520276 MSH6P52701 1360 aa13.03□□□□□ -0.32
TRPS1-211ENST00000520276 RBM10P98175 930 aaKnown RBP13.03□□□□□ -0.32
TRPS1-211ENST00000520276 CADPS2Q86UW7 1296 aa13.03□□□□□ -0.32
TRPS1-211ENST00000520276 LMTK3Q96Q04 1460 aa13.03□□□□□ -0.32
TRPS1-211ENST00000520276 E9PCH4 1651 aa13.03□□□□□ -0.32
TRPS1-211ENST00000520276 SPATA31D1Q6ZQQ2 1576 aa13.03□□□□□ -0.32
TRPS1-211ENST00000520276 HDGFL2Q7Z4V5 671 aaPredicted RBP13.03□□□□□ -0.32
TRPS1-211ENST00000520276 PANK2Q9BZ23 570 aa13.02□□□□□ -0.32
TRPS1-211ENST00000520276 ESCO1Q5FWF5 840 aa13.02□□□□□ -0.33
TRPS1-211ENST00000520276 VWDEQ8N2E2 1590 aa13.02□□□□□ -0.33
TRPS1-211ENST00000520276 MROH1Q8NDA8 1641 aa13.02□□□□□ -0.33
TRPS1-211ENST00000520276 ZBTB7CA1YPR0 619 aa13.02□□□□□ -0.33
TRPS1-211ENST00000520276 ZNF335Q9H4Z2 1342 aaPredicted RBP13.02□□□□□ -0.33
TRPS1-211ENST00000520276 C3P01024 1663 aa13.01□□□□□ -0.33
TRPS1-211ENST00000520276 PREX1Q8TCU6 1659 aa13.01□□□□□ -0.33
TRPS1-211ENST00000520276 CLCN1P35523 988 aa13.01□□□□□ -0.33
TRPS1-211ENST00000520276 C8orf34Q49A92 452 aa13.01□□□□□ -0.33
TRPS1-211ENST00000520276 ADGRB3O60242 1522 aa13.01□□□□□ -0.33
TRPS1-211ENST00000520276 KIF1BO60333 1816 aa13□□□□□ -0.33
TRPS1-211ENST00000520276 USP47Q96K76 1375 aa13□□□□□ -0.33
TRPS1-211ENST00000520276 PSME1Q06323 249 aa13□□□□□ -0.33
TRPS1-211ENST00000520276 SPHKAPQ2M3C7 1700 aa13□□□□□ -0.33
TRPS1-211ENST00000520276 XRCC6P12956 609 aaKnown RBP eCLIP13□□□□□ -0.33
TRPS1-211ENST00000520276 CRBNQ96SW2 442 aa13□□□□□ -0.33
TRPS1-211ENST00000520276 C19orf44Q9H6X5 657 aa13□□□□□ -0.33
TRPS1-211ENST00000520276 MROH2AA6NES4 1674 aa12.99□□□□□ -0.33
TRPS1-211ENST00000520276 TERF2IPQ9NYB0 399 aa12.99□□□□□ -0.33
TRPS1-211ENST00000520276 SPATA31E1Q6ZUB1 1445 aa12.98□□□□□ -0.33
TRPS1-211ENST00000520276 CDCA7LQ96GN5 454 aa12.98□□□□□ -0.33
TRPS1-211ENST00000520276 PIK3C2BO00750 1634 aa12.97□□□□□ -0.33
TRPS1-211ENST00000520276 CLTCL1P53675 1640 aa12.97□□□□□ -0.33
TRPS1-211ENST00000520276 KNSTRNQ9Y448 316 aa12.97□□□□□ -0.33
TRPS1-211ENST00000520276 L1TD1Q5T7N2 865 aaKnown RBP12.97□□□□□ -0.33
TRPS1-211ENST00000520276 CDK19Q9BWU1 502 aa12.97□□□□□ -0.33
TRPS1-211ENST00000520276 CABP2Q9NPB3 220 aa12.97□□□□□ -0.33
TRPS1-211ENST00000520276 AAMPQ13685 434 aa12.96□□□□□ -0.33
TRPS1-211ENST00000520276 SLKQ9H2G2 1235 aaPredicted RBP12.96□□□□□ -0.33
TRPS1-211ENST00000520276 FAM161AQ3B820 660 aa12.96□□□□□ -0.34
TRPS1-211ENST00000520276 C20orf194Q5TEA3 1177 aa12.96□□□□□ -0.34
TRPS1-211ENST00000520276 LRPPRCP42704 1394 aaKnown RBP12.95□□□□□ -0.34
TRPS1-211ENST00000520276 PMFBP1Q8TBY8 1022 aa12.95□□□□□ -0.34
TRPS1-211ENST00000520276 PRDM4Q9UKN5 801 aa12.95□□□□□ -0.34
TRPS1-211ENST00000520276 RGS3P49796 1198 aa12.95□□□□□ -0.34
TRPS1-211ENST00000520276 PIK3R4Q99570 1358 aa12.95□□□□□ -0.34
TRPS1-211ENST00000520276 SYNMO15061 1565 aa12.95□□□□□ -0.34
TRPS1-211ENST00000520276 PRAG1Q86YV5 1406 aa12.94□□□□□ -0.34
TRPS1-211ENST00000520276 YTHDC2Q9H6S0 1430 aaKnown RBP12.94□□□□□ -0.34
TRPS1-211ENST00000520276 TMEM94Q12767 1356 aa12.94□□□□□ -0.34
TRPS1-211ENST00000520276 GPRASP1Q5JY77 1395 aa12.94□□□□□ -0.34
TRPS1-211ENST00000520276 SOX12O15370 315 aa12.93□□□□□ -0.34
TRPS1-211ENST00000520276 GZF1Q9H116 711 aaPredicted RBP12.93□□□□□ -0.34
TRPS1-211ENST00000520276 ERBB4Q15303 1308 aa12.93□□□□□ -0.34
TRPS1-211ENST00000520276 METP08581 1390 aa12.93□□□□□ -0.34
TRPS1-211ENST00000520276 KDM2BQ8NHM5 1336 aa12.93□□□□□ -0.34
TRPS1-211ENST00000520276 ZFYVE9O95405 1425 aa12.92□□□□□ -0.34
TRPS1-211ENST00000520276 WASLO00401 505 aaPredicted RBP12.92□□□□□ -0.34
TRPS1-211ENST00000520276 CERKQ8TCT0 537 aa12.92□□□□□ -0.34
TRPS1-211ENST00000520276 SIGLEC1Q9BZZ2 1709 aa12.92□□□□□ -0.34
TRPS1-211ENST00000520276 MYO3AQ8NEV4 1616 aa12.92□□□□□ -0.34
TRPS1-211ENST00000520276 NUDT16Q96DE0 195 aaKnown RBP12.92□□□□□ -0.34
TRPS1-211ENST00000520276 CCDC61Q9Y6R9 512 aa12.92□□□□□ -0.34
TRPS1-211ENST00000520276 ABCC11Q96J66 1382 aa12.91□□□□□ -0.34
TRPS1-211ENST00000520276 GOLGA6L3A6NEY3 463 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms