RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, human

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL13A1-213	ENST00000520267	DUSP27	Q5VZP5	1158 aa		33.99	■■■■□ 3.03
COL13A1-213	ENST00000520267	PLIN1	O60240	522 aa		33.98	■■■■□ 3.03
COL13A1-213	ENST00000520267	GOLGA2	Q08379	1002 aa		33.98	■■■■□ 3.03
COL13A1-213	ENST00000520267	CABP2	Q9NPB3	220 aa		33.97	■■■■□ 3.03
COL13A1-213	ENST00000520267	APAF1	O14727	1248 aa		33.96	■■■■□ 3.03
COL13A1-213	ENST00000520267	PPP6R1	Q9UPN7	881 aa		33.96	■■■■□ 3.03
COL13A1-213	ENST00000520267	TNNT2	P45379	298 aa	Predicted RBP	33.95	■■■■□ 3.02
COL13A1-213	ENST00000520267	PTPRM	P28827	1452 aa		33.95	■■■■□ 3.02
COL13A1-213	ENST00000520267	ANKRD36B	Q8N2N9	1353 aa		33.94	■■■■□ 3.02
COL13A1-213	ENST00000520267	SHPRH	Q149N8	1683 aa		33.93	■■■■□ 3.02
COL13A1-213	ENST00000520267	CGNL1	Q0VF96	1302 aa		33.93	■■■■□ 3.02
COL13A1-213	ENST00000520267	KIF13A	Q9H1H9	1805 aa		33.92	■■■■□ 3.02
COL13A1-213	ENST00000520267	SLFN5	Q08AF3	891 aa		33.91	■■■■□ 3.02
COL13A1-213	ENST00000520267	STAG3	Q9UJ98	1225 aa		33.91	■■■■□ 3.02
COL13A1-213	ENST00000520267	YTHDC2	Q9H6S0	1430 aa	Known RBP	33.91	■■■■□ 3.02
COL13A1-213	ENST00000520267	ALK	Q9UM73	1620 aa		33.91	■■■■□ 3.02
COL13A1-213	ENST00000520267	FANCI	Q9NVI1	1328 aa		33.89	■■■■□ 3.02
COL13A1-213	ENST00000520267	MLEC	Q14165	292 aa		33.88	■■■■□ 3.01
COL13A1-213	ENST00000520267	SPATA31D1	Q6ZQQ2	1576 aa		33.88	■■■■□ 3.01
COL13A1-213	ENST00000520267	TRMT2A	Q8IZ69	625 aa	Known RBP	33.87	■■■■□ 3.01
COL13A1-213	ENST00000520267	PRAM1	Q96QH2	718 aa		33.86	■■■■□ 3.01
COL13A1-213	ENST00000520267	SRPK2	P78362	688 aa	Known RBP	33.84	■■■■□ 3.01
COL13A1-213	ENST00000520267	CRBN	Q96SW2	442 aa		33.84	■■■■□ 3.01
COL13A1-213	ENST00000520267	SPINK5	Q9NQ38	1064 aa	Predicted RBP	33.84	■■■■□ 3.01
COL13A1-213	ENST00000520267	MINK1	Q8N4C8	1332 aa	Predicted RBP	33.84	■■■■□ 3.01
COL13A1-213	ENST00000520267	ARHGEF40	Q8TER5	1519 aa		33.84	■■■■□ 3.01
COL13A1-213	ENST00000520267	A2ML1	A8K2U0	1454 aa		33.84	■■■■□ 3.01
COL13A1-213	ENST00000520267	POGK	Q9P215	609 aa		33.82	■■■■□ 3
COL13A1-213	ENST00000520267	NSD2	O96028	1365 aa		33.82	■■■■□ 3
COL13A1-213	ENST00000520267	MTHFS	P49914	203 aa		33.82	■■■■□ 3
COL13A1-213	ENST00000520267		A0A1W2PP64	1363 aa		33.81	■■■■□ 3
COL13A1-213	ENST00000520267	C20orf194	Q5TEA3	1177 aa		33.8	■■■■□ 3
COL13A1-213	ENST00000520267	NINL	Q9Y2I6	1382 aa		33.8	■■■■□ 3
COL13A1-213	ENST00000520267	MSH5	O43196	834 aa		33.79	■■■■□ 3
COL13A1-213	ENST00000520267	NGEF	Q8N5V2	710 aa		33.79	■■■■□ 3
COL13A1-213	ENST00000520267	DMRT2	Q9Y5R5	561 aa		33.77	■■■■□ 3
COL13A1-213	ENST00000520267	RIMS2	Q9UQ26	1411 aa		33.76	■■■■□ 3
COL13A1-213	ENST00000520267	ATAD2	Q6PL18	1390 aa		33.76	■■■□□ 2.99
COL13A1-213	ENST00000520267	ABCC11	Q96J66	1382 aa		33.75	■■■□□ 2.99
COL13A1-213	ENST00000520267		E9PSI1	815 aa		33.74	■■■□□ 2.99
COL13A1-213	ENST00000520267	NKTR	P30414	1462 aa	Known RBP	33.74	■■■□□ 2.99
COL13A1-213	ENST00000520267	ANP32E	Q9BTT0	268 aa		33.74	■■■□□ 2.99
COL13A1-213	ENST00000520267	SETD1A	O15047	1707 aa	Known RBP	33.73	■■■□□ 2.99
COL13A1-213	ENST00000520267	CFAP53	Q96M91	514 aa		33.73	■■■□□ 2.99
COL13A1-213	ENST00000520267	CD163L1	Q9NR16	1453 aa		33.72	■■■□□ 2.99
COL13A1-213	ENST00000520267	RUNDC1	Q96C34	613 aa		33.72	■■■□□ 2.99
COL13A1-213	ENST00000520267	WWC1	Q8IX03	1113 aa		33.71	■■■□□ 2.99
COL13A1-213	ENST00000520267	IQSEC2	Q5JU85	1478 aa		33.7	■■■□□ 2.99
COL13A1-213	ENST00000520267	CDK19	Q9BWU1	502 aa		33.69	■■■□□ 2.98
COL13A1-213	ENST00000520267	GGNBP2	Q9H3C7	697 aa		33.67	■■■□□ 2.98
COL13A1-213	ENST00000520267	TERF2IP	Q9NYB0	399 aa		33.67	■■■□□ 2.98
COL13A1-213	ENST00000520267	ZMYM3	Q14202	1370 aa		33.67	■■■□□ 2.98
COL13A1-213	ENST00000520267	DLC1	Q96QB1	1528 aa		33.67	■■■□□ 2.98
COL13A1-213	ENST00000520267	ANKRD26	Q9UPS8	1709 aa		33.66	■■■□□ 2.98
COL13A1-213	ENST00000520267	TCP11L2	Q8N4U5	519 aa		33.65	■■■□□ 2.98
COL13A1-213	ENST00000520267	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	33.65	■■■□□ 2.98
COL13A1-213	ENST00000520267	RRP7A	Q9Y3A4	280 aa	Known RBP	33.65	■■■□□ 2.98
COL13A1-213	ENST00000520267	NEUROD2	Q15784	382 aa		33.64	■■■□□ 2.98
COL13A1-213	ENST00000520267	WAPL	Q7Z5K2	1190 aa		33.64	■■■□□ 2.98
COL13A1-213	ENST00000520267	ESF1	Q9H501	851 aa	Known RBP	33.63	■■■□□ 2.97
COL13A1-213	ENST00000520267	NRXN3	Q9Y4C0	1643 aa		33.63	■■■□□ 2.97
COL13A1-213	ENST00000520267	FYB1	O15117	783 aa		33.62	■■■□□ 2.97
COL13A1-213	ENST00000520267	NLRP1	Q9C000	1473 aa		33.61	■■■□□ 2.97
COL13A1-213	ENST00000520267	BCAR3	O75815	825 aa		33.6	■■■□□ 2.97
COL13A1-213	ENST00000520267	CABP1	Q9NZU7	370 aa		33.6	■■■□□ 2.97
COL13A1-213	ENST00000520267	PHF23	Q9BUL5	403 aa	Predicted RBP	33.59	■■■□□ 2.97
COL13A1-213	ENST00000520267	MED14	O60244	1454 aa		33.59	■■■□□ 2.97
COL13A1-213	ENST00000520267	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	33.58	■■■□□ 2.97
COL13A1-213	ENST00000520267	TCERG1	O14776	1098 aa	Known RBP	33.58	■■■□□ 2.97
COL13A1-213	ENST00000520267	U2AF1L5	P0DN76	240 aa	Predicted RBP	33.58	■■■□□ 2.97
COL13A1-213	ENST00000520267	U2AF1	Q01081	240 aa	Known RBP eCLIP	33.58	■■■□□ 2.97
COL13A1-213	ENST00000520267	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33.55	■■■□□ 2.96
COL13A1-213	ENST00000520267	KIF20B	Q96Q89	1820 aa		33.55	■■■□□ 2.96
COL13A1-213	ENST00000520267	COL3A1	P02461	1466 aa	Predicted RBP	33.54	■■■□□ 2.96
COL13A1-213	ENST00000520267	MET	P08581	1390 aa		33.53	■■■□□ 2.96
COL13A1-213	ENST00000520267	CCDC27	Q2M243	656 aa		33.51	■■■□□ 2.96
COL13A1-213	ENST00000520267	WDR63	Q8IWG1	891 aa		33.51	■■■□□ 2.96
COL13A1-213	ENST00000520267	ADGRB2	O60241	1585 aa		33.51	■■■□□ 2.95
COL13A1-213	ENST00000520267	KDM2B	Q8NHM5	1336 aa		33.51	■■■□□ 2.95
COL13A1-213	ENST00000520267	TNR	Q92752	1358 aa		33.5	■■■□□ 2.95
COL13A1-213	ENST00000520267	SKAP1	Q86WV1	359 aa		33.47	■■■□□ 2.95
COL13A1-213	ENST00000520267	ATP7B	P35670	1465 aa		33.47	■■■□□ 2.95
COL13A1-213	ENST00000520267	U2SURP	O15042	1029 aa	Known RBP	33.46	■■■□□ 2.95
COL13A1-213	ENST00000520267	NCBP3	Q53F19	620 aa	Known RBP	33.46	■■■□□ 2.95
COL13A1-213	ENST00000520267	MS4A1	P11836	297 aa		33.45	■■■□□ 2.95
COL13A1-213	ENST00000520267	UBR1	Q8IWV7	1749 aa		33.45	■■■□□ 2.94
COL13A1-213	ENST00000520267	TXNDC2	Q86VQ3	553 aa		33.44	■■■□□ 2.94
COL13A1-213	ENST00000520267	PLEKHF1	Q96S99	279 aa		33.44	■■■□□ 2.94
COL13A1-213	ENST00000520267	KNDC1	Q76NI1	1749 aa		33.43	■■■□□ 2.94
COL13A1-213	ENST00000520267	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	33.42	■■■□□ 2.94
COL13A1-213	ENST00000520267	WASL	O00401	505 aa	Predicted RBP	33.42	■■■□□ 2.94
COL13A1-213	ENST00000520267	HDGF	P51858	240 aa	Known RBP	33.42	■■■□□ 2.94
COL13A1-213	ENST00000520267	CENPQ	Q7L2Z9	268 aa	Predicted RBP	33.42	■■■□□ 2.94
COL13A1-213	ENST00000520267	PDE4A	P27815	886 aa		33.41	■■■□□ 2.94
COL13A1-213	ENST00000520267	PNPLA6	Q8IY17	1366 aa		33.39	■■■□□ 2.94
COL13A1-213	ENST00000520267	TMEM2	Q9UHN6	1383 aa		33.39	■■■□□ 2.94
COL13A1-213	ENST00000520267	RARS	P54136	660 aa	Known RBP	33.38	■■■□□ 2.93
COL13A1-213	ENST00000520267	PDE3A	Q14432	1141 aa		33.37	■■■□□ 2.93
COL13A1-213	ENST00000520267	ERICH6	Q7L0X2	663 aa		33.37	■■■□□ 2.93
COL13A1-213	ENST00000520267	PPIP5K1	Q6PFW1	1433 aa		33.37	■■■□□ 2.93

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms